BDGP Sequence Production Resources |
Search the DGRC for LD20362
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 203 |
Well: | 62 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG33229-RA |
Protein status: | LD20362.pep: gold |
Preliminary Size: | 1560 |
Sequenced Size: | 1495 |
Gene | Date | Evidence |
---|---|---|
CG16971 | 2001-01-01 | Release 2 assignment |
CG33229 | 2001-10-10 | Blastp of sequenced clone |
CG33229 | 2008-04-29 | Release 5.5 accounting |
CG33229 | 2008-08-15 | Release 5.9 accounting |
CG33229 | 2008-12-18 | 5.12 accounting |
1495 bp (1495 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061287
> LD20362.complete TAGAACAGTCATAAGCAGTCCGCTAAGAGATTAGTAGCAACTACGAAGTG AAGGTGTGTGTATACCAAATTCTCAATTTTCTCTTCGAGTCGTCGCAAAC AAAAACCCTGTGAGATCATCGAAATGGTGGCGTACTACGACGAGTGCGAC GCAGCCGAGAACCCCAAGACCCTAACCGACTGGGTCCGTAACTTCCGCGT TAAGCGCCAGAAAATGCGTCGCAAGCTAAGAGGCGCTGGCAGCGACCTAC GCGTGAACGCCATTTTGTCGACGGCCCTGCTCCACGCAGAGCACGAGCTG CGTAGAAAGCAGCAGGAGCGCTTCAGTCGCTGGCTGGACATTCAAACACG GTTTGTGCCCCACGGCAGAACGCACTGCGCCAGTGACGCGTACTCTGCAG TGGCGACCTCGACCACCAAGGCTGCCGCAGAAGCAGAGGCGGAAAGCAAT TTATGGAGCAGCGAGCTTAGTAGCCTCGACAGTTTTATGCGTAGCTTAAG CAGCAACAATGGCAACCAAGACACATGCAACAACAATAACAATGGGAGCA ACAGTTACACGGGCGCCAGCAATAACAATAACAGCAACAATGAGCAGCAC AGCTGCGCCATTGCCGTGGCCAGTTAGTTAGACAGAGACGACCGTATGGT GCGTACTTTATGTGTATGCGTGGCTGACACACACATCTATATAAACAAAA TGGCGTCAGGATGGAAGGAACCGTTTAGTTTTCAGCTGCCCGTTCGAATC AAACCGTATACCATTGTTCAAATACGTAGCTTTAGCCCTATTTGTCTTCT GTTAAAATAGTTTTATTACGACAACCAATTTCTCATTTGCAGTCGCAAAC ATGTGCAAGGCTGTTGTAGATTGTAAAGAAAGAATGAAGGATTGGAAGAG TGTGAGGAGACGCTGAGCAAACGGCCTTCAAATCGAAAGTGGTGTGAGTC ATGGGCGCTGCCACCATCTATGCGAAAAGCCCACCAAGCATTGGTCACGG AGCACACTCGGTTTGTAAATAAGTATATTTTTTTTAGTTAAATTACGTAG CTTAATGAGTGTGGCGAAATAAGACGTCGCTTACAGGCATCCCAAACGTC ACGAAATCGGTCAGACAAAGAAAAAAAAAACTCGATATACTTACACAATG CATACACATTAACACATCTACATGTCGCGATGGTGTGTGAGCATGAACGC TCGTGCTATTTTTGTGTACACCAAGTTGAGCTACTTTTGTTGTCCGATGT GTCGAGAAATTCGATTTCGAATTAAATTCGAACGTTCGTCATCGCCACTT CTGCGAGTTACATACGGTTCATATTGAATCACTAGCGCTAGAAAACGGGC AATATTGCAAAGTAAACGAGTGAAAGTCGAAAACCCAACTATTAACTGTA AATGTACTTAAAGTAAGCATACAGAACTGATATTTGATAAAACCTAAAAT AAAACTATTATAATTAATAACTGTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33229-RA | 1483 | CG33229-RA | 1..1479 | 1..1479 | 7395 | 100 | Plus |
CG16971-RD | 525 | CG16971-RD | 78..247 | 841..1010 | 850 | 100 | Plus |
CG16971-RC | 667 | CG16971-RC | 78..247 | 841..1010 | 850 | 100 | Plus |
CG16971-RD | 525 | CG16971-RD | 27..79 | 1..53 | 265 | 100 | Plus |
CG16971-RC | 667 | CG16971-RC | 27..79 | 1..53 | 265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 224086..225560 | 1..1475 | 7360 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 224131..225609 | 1..1479 | 7395 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 224131..225609 | 1..1479 | 7395 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6837 | 499..599 | 213 | 70.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6661..6824 | 441..603 | 203 | 65.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2419 | 499..610 | 191 | 68.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2512 | 428..599 | 181 | 58.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1063..1158 | 491..589 | 172 | 68 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6813..6912 | 499..599 | 161 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6919 | 422..590 | 158 | 61.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1006..1179 | 412..587 | 145 | 57.5 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 6360..6415 | 1419..1472 | 139 | 76.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2455..2550 | 493..587 | 136 | 64.6 | Plus |
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 4298..4421 | 1340..1464 | 135 | 61.7 | Plus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 2608..2685 | 505..582 | 129 | 62.8 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1158 | 445..541 | 125 | 58.8 | Plus |
Dvir\Uvir | 6564 | Dvir\Uvir VIRUVIR 6564bp | 6522..6560 | 1419..1457 | 123 | 79.5 | Plus |
accord2 | 7650 | accord2 QBERT 7650bp | 4407..4493 | 590..504 | 119 | 65.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 224086..224583 | 1..498 | 100 | == | Plus |
chr3L | 224676..225560 | 591..1475 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33229-RA | 1..504 | 124..627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33229-RA | 1..504 | 124..627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33229-RA | 1..504 | 124..627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33229-RA | 1..504 | 124..627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33229-RA | 1..1475 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33229-RA | 26..1500 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33229-RA | 26..1500 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33229-RA | 1..1475 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33229-RA | 26..1500 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 224131..225605 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 224131..225605 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 224131..225605 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 224131..225605 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 224131..225605 | 1..1475 | 100 | Plus |
Translation from 123 to 626
> LD20362.pep MVAYYDECDAAENPKTLTDWVRNFRVKRQKMRRKLRGAGSDLRVNAILST ALLHAEHELRRKQQERFSRWLDIQTRFVPHGRTHCASDAYSAVATSTTKA AAEAEAESNLWSSELSSLDSFMRSLSSNNGNQDTCNNNNNGSNSYTGASN NNNSNNEQHSCAIAVAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24747-PA | 170 | GF24747-PA | 1..126 | 1..126 | 521 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14704-PA | 167 | GG14704-PA | 1..167 | 1..167 | 641 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19230-PA | 166 | GH19230-PA | 1..129 | 1..121 | 423 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33229-PB | 167 | CG33229-PB | 1..167 | 1..167 | 870 | 100 | Plus |
CG33229-PA | 167 | CG33229-PA | 1..167 | 1..167 | 870 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13759-PA | 150 | GI13759-PA | 1..129 | 1..121 | 387 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16117-PA | 161 | GL16117-PA | 1..161 | 1..167 | 557 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28387-PA | 161 | GA28387-PA | 1..161 | 1..167 | 555 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14320-PA | 167 | GM14320-PA | 1..167 | 1..167 | 859 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13558-PA | 167 | GD13558-PA | 1..167 | 1..167 | 717 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17444-PA | 150 | GJ17444-PA | 1..150 | 1..167 | 389 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11395-PA | 175 | GK11395-PA | 1..129 | 1..123 | 501 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21068-PA | 167 | GE21068-PA | 1..167 | 1..167 | 641 | 92.8 | Plus |
Translation from 123 to 626
> LD20362.hyp MVAYYDECDAAENPKTLTDWVRNFRVKRQKMRRKLRGAGSDLRVNAILST ALLHAEHELRRKQQERFSRWLDIQTRFVPHGRTHCASDAYSAVATSTTKA AAEAEAESNLWSSELSSLDSFMRSLSSNNGNQDTCNNNNNGSNSYTGASN NNNSNNEQHSCAIAVAS*