BDGP Sequence Production Resources |
Search the DGRC for LD20383
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 203 |
Well: | 83 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG10013-RA |
Protein status: | LD20383.pep: gold |
Preliminary Size: | 1745 |
Sequenced Size: | 1697 |
Gene | Date | Evidence |
---|---|---|
CG10013 | 2001-01-01 | Release 2 assignment |
CG10013 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10013 | 2003-04-25 | Blastp of sequenced clone |
CG10013 | 2008-04-29 | Release 5.5 accounting |
CG10013 | 2008-08-15 | Release 5.9 accounting |
CG10013 | 2008-12-18 | 5.12 accounting |
1697 bp (1697 high quality bases) assembled on 2003-04-25
GenBank Submission: BT010051
> LD20383.complete CAACTTCTAGATGACAATCGATTTATAAGTGTAACAAAAAGCGAGCCACT CACTTGACTAGTTAAACTAACTATTTCAATAACTTTAATCAACTGAAATC AAAATTAAGTTCAGGACAATGTCGTTAGACCAAGTTATAATCAACTGCAT GCGCAGCAAGAACTGGATCAATGTCCTGCTCCTTAGATCGATGGATCTTT TCCAACCCCTACTGGTCGAGAGTTCCAATGTGTCCCAATTGATAGAGGTC AGCCCCAATGGGATCAGTTGGCACGAGAAGAACGTGGAGTACCGCATCAT AATGGACGAGTTCTTCGATATAATCACCAGGACGAATGCTGGCGACGTGC CCATTACCTTAGTCGAAATGAAGGGTAGTCATGTGTCATTTGGATTATAT CTCCGTAGGATTAGGTACAGCATTTTGGATGCGCTCACCATTAATGTGGA ACTGGGGGAGCTGCCAATGTGTATTTCCCCATACAATTCCTGTTCCCTGC ACTGCAGCAACTGTACGAATGAAATCATTGGGCAAAGGCAGTATTATCAT ATCCAGGAGGTTCCGATAACGACCATCTTGCCGCAGAACTACTTCTGTCC CCGCAACAGGATCCCAGTGTATCCTTCGGAGGAGGAGCTCTATTACGGCC TCAACTATCTGGTCGTATGCTCCGAGCTGCTCGGCAACGGAGTCAAGACC ATCGCAGGTCGTCGTCGCGTACTCTGCTCACGCTGCAAGAAGTGCGTAGG CGAGTTTATTACCAGGGATGTGGGCGTGCAGCTGTACGCGGATGCCTTGC GATTTGTGACCTTGGACTCCCCACTCGAGTTCAAGGAGATCTTTGGCCAT GTGACACCCACCCAAATTATGATGCGCCTGGTGAACGACGGCGAAATCTG TGGCCCGGATCAGAGACGCCTCTTCCTCAAGGCCGTGCGTCCGGATGGTC AGTTGCAGTTATTGCACTTGGAGATGGATACCAAGCAGATGCACATTCTG CGCTCCGAGCTGAAGTTGCCCGACATTAAAAAACCTGATATAGACTTACC CATGGAGGTCGATACCAGCAGCGAAAGTGATGTGGACATGAATGTGAGCG ATACGAGCAGCAGCAACTCCATGCCCCAAACAGGAGATGAAGAATTAGCT CCAACACCCAGATCCACTACCCCCAGAGGAACTCCTACAAAGACCGTGCA ATATGTGCGGTTGCGTGGCTTTCGTGGCTGGCGCGTTAGGTACCTGTTCT CGGGAAGTGATCGCGATCTGATCGAACACGACGATGTCTATATAAACTGG ACCGATGAGGGAACCCGCCTTTTGTACATCTCCCACTTGATGATGGCAGA CCTCCTAAGCGAGTTCAATGCCAATGAGAACCTTGTGGCCAGTTTGGAGA AGAAGCCGCTACCCACCAGGACTGATAATCCCCGGCAAAGCTGCATTATC TGCGAGTCTGATAAAGAGTTCTATGCCAGGTACGAGCGACTTGCCAAGAT TTCTCAAGAGGGATGAAGTTCAATCCCAGCTGAACCAAGCTATTAAAAAT AAGATTTGTTTACATTTATCAATATGAGATGTTTTATTTCAAAATATGAT TTAATTAAACTTGCATTTGTATTTCCTCATCATGTCATACAAAAAATAAA ACCATAAATATTGAAGCTTTTGTAATGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10013-RA | 1692 | CG10013-RA | 11..1692 | 1..1682 | 8410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8148929..8150606 | 1..1678 | 8390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12323533..12325214 | 1..1682 | 8410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 12064364..12066045 | 1..1682 | 8410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
invader1 | 4032 | invader1 INVADER 4032bp | 3458..3549 | 1655..1564 | 135 | 63.4 | Minus |
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 5758..5846 | 1635..1551 | 129 | 64 | Minus |
X-element | 4740 | X-element ROXELEMENT 4740bp | 3054..3111 | 1490..1548 | 112 | 67.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8148929..8150606 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10013-RA | 1..1398 | 119..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10013-RA | 1..1398 | 119..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10013-RA | 1..1398 | 119..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10013-RA | 1..1398 | 119..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10013-RA | 1..1398 | 119..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10013-RA | 11..1688 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10013-RA | 11..1688 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10013-RA | 13..1690 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10013-RA | 11..1688 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10013-RA | 13..1690 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12323533..12325210 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12323533..12325210 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12323533..12325210 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8149255..8150932 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12064364..12066041 | 1..1678 | 100 | Plus |
Translation from 118 to 1515
> LD20383.hyp MSLDQVIINCMRSKNWINVLLLRSMDLFQPLLVESSNVSQLIEVSPNGIS WHEKNVEYRIIMDEFFDIITRTNAGDVPITLVEMKGSHVSFGLYLRRIRY SILDALTINVELGELPMCISPYNSCSLHCSNCTNEIIGQRQYYHIQEVPI TTILPQNYFCPRNRIPVYPSEEELYYGLNYLVVCSELLGNGVKTIAGRRR VLCSRCKKCVGEFITRDVGVQLYADALRFVTLDSPLEFKEIFGHVTPTQI MMRLVNDGEICGPDQRRLFLKAVRPDGQLQLLHLEMDTKQMHILRSELKL PDIKKPDIDLPMEVDTSSESDVDMNVSDTSSSNSMPQTGDEELAPTPRST TPRGTPTKTVQYVRLRGFRGWRVRYLFSGSDRDLIEHDDVYINWTDEGTR LLYISHLMMADLLSEFNANENLVASLEKKPLPTRTDNPRQSCIICESDKE FYARYERLAKISQEG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10013-PA | 465 | CG10013-PA | 1..465 | 1..465 | 2438 | 100 | Plus |
CG7326-PB | 482 | CG7326-PB | 89..312 | 84..295 | 172 | 22 | Plus |
CG7326-PA | 482 | CG7326-PA | 89..312 | 84..295 | 172 | 22 | Plus |
Translation from 118 to 1515
> LD20383.pep MSLDQVIINCMRSKNWINVLLLRSMDLFQPLLVESSNVSQLIEVSPNGIS WHEKNVEYRIIMDEFFDIITRTNAGDVPITLVEMKGSHVSFGLYLRRIRY SILDALTINVELGELPMCISPYNSCSLHCSNCTNEIIGQRQYYHIQEVPI TTILPQNYFCPRNRIPVYPSEEELYYGLNYLVVCSELLGNGVKTIAGRRR VLCSRCKKCVGEFITRDVGVQLYADALRFVTLDSPLEFKEIFGHVTPTQI MMRLVNDGEICGPDQRRLFLKAVRPDGQLQLLHLEMDTKQMHILRSELKL PDIKKPDIDLPMEVDTSSESDVDMNVSDTSSSNSMPQTGDEELAPTPRST TPRGTPTKTVQYVRLRGFRGWRVRYLFSGSDRDLIEHDDVYINWTDEGTR LLYISHLMMADLLSEFNANENLVASLEKKPLPTRTDNPRQSCIICESDKE FYARYERLAKISQEG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19245-PA | 491 | GF19245-PA | 87..271 | 79..256 | 186 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18739-PA | 455 | GG18739-PA | 1..455 | 1..462 | 1644 | 70.2 | Plus |
Dere\GG18087-PA | 489 | GG18087-PA | 88..311 | 84..295 | 179 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17688-PA | 483 | GH17688-PA | 51..307 | 67..295 | 213 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10013-PA | 465 | CG10013-PA | 1..465 | 1..465 | 2438 | 100 | Plus |
CG7326-PB | 482 | CG7326-PB | 89..312 | 84..295 | 172 | 22 | Plus |
CG7326-PA | 482 | CG7326-PA | 89..312 | 84..295 | 172 | 22 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22896-PA | 457 | GI22896-PA | 1..456 | 1..450 | 585 | 33.7 | Plus |
Dmoj\GI21509-PA | 492 | GI21509-PA | 70..304 | 79..295 | 215 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22276-PA | 498 | GL22276-PA | 1..477 | 1..461 | 617 | 34.7 | Plus |
Dper\GL21317-PA | 488 | GL21317-PA | 78..260 | 88..256 | 170 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27439-PA | 501 | GA27439-PA | 1..480 | 1..461 | 615 | 33.8 | Plus |
Dpse\GA20262-PA | 488 | GA20262-PA | 78..260 | 88..256 | 170 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24012-PA | 464 | GM24012-PA | 1..464 | 1..464 | 2128 | 86.9 | Plus |
Dsec\GM22779-PA | 453 | GM22779-PA | 89..268 | 84..256 | 173 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18813-PA | 325 | GD18813-PA | 1..277 | 1..277 | 1365 | 91.7 | Plus |
Dsim\GD15612-PA | 486 | GD15612-PA | 89..312 | 84..295 | 186 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23308-PA | 448 | GJ23308-PA | 1..427 | 1..428 | 635 | 35.3 | Plus |
Dvir\GJ19047-PA | 516 | GJ19047-PA | 70..298 | 79..295 | 190 | 29 | Plus |