BDGP Sequence Production Resources |
Search the DGRC for LD20463
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 204 |
Well: | 63 |
Vector: | pBS SK- |
Associated Gene/Transcript | Sans-RA |
Protein status: | LD20463.pep: gold |
Preliminary Size: | 1943 |
Sequenced Size: | 1879 |
Gene | Date | Evidence |
---|---|---|
CG13320 | 2001-01-01 | Release 2 assignment |
CG13320 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13320 | 2003-08-05 | Blastp of sequenced clone |
Sans | 2008-04-29 | Release 5.5 accounting |
Sans | 2008-08-15 | Release 5.9 accounting |
Sans | 2008-12-18 | 5.12 accounting |
1879 bp (1879 high quality bases) assembled on 2005-08-22
GenBank Submission: BT009925
> LD20463.complete GCTTCCGGGTAACGGCTTTCGGAACGTGCATATTCTACCGATCGCAGATG AAAACTTTCGGTTCGTTTGGCTAAAAAGAAAAGTGTCAAGCTGCCCGGAG TGGGAAAATCCAATTTGAAATCCTGCATTTGAAAAGTCGTCTTGAACCGG GACAACTAACTGATCGATTCAAGAATTTCCATCGCCAACCTGATTGAAAG ATAACACAGACGAATATGTCATCGGATCGGTTTCACAAAGCCGCCAAAGA TGGGCTGTTGGATGTGTTGGCAGCAGCCACACGGAAGGATACGAATGCCA AGGACAGTGATTCCATGACGCCGGTCATGTGGGCTGCCTTCGAGGGGCGT CTGGATGCACTGCGTCTGCTGTGCGGAAGGGGTGGTGACCCTGACAAATG CGATCAGTTCGGAAACACAGCCTTGCACTTGGCCTCCGCCAAGGGTCATT TGCATTGCGTCGACTTCTTGGTGAAATTCGGAGTAAACATCTATGCCTTG GATATCGATAAGCACAGCGCCAAGGATCTGGCGGCTATTAATGGCAGGGA CGAGATCCTGCGCTACTTGGATGTTGCCTTCACAAACTTTGAGGCCACTG AAAAAAAAAAAAGCAAGGCCCTGAAAGAATTGGCCGAGAAAAACTGCGAG AAACGTGTTAGGGAGTACATGAAGCGCCAGAATCAGCAGCAACAGCGCCA GGATCCGGAGTATTCGGATCTAAGCGCACCCAGTGGCTCCAGCAAGACCG GCAACATGCTGTCCACTCTGAAGCAGAAGATCTGGTCCAGCCAGGGCAAT CTAAATAAGACACCAAGGGATACACCGCCTCCCACAAAGTTCAGCGATCT GGTTGGGAACGGTAGCAGCAGCAGCGGTGGCTCCACAATAGCCAGTCGAG CGGGAACGGTGCAAAAGAGACCGTCGCAGCTCCAAAAGCAGCACAGCAGC ACATGTCCACACTCGAAGATATCCAGCGACACAGACGGTGGCTTCAAGGT GCGCGAGGTGGAGCCAGATGGAAAGCGAACCATTACATCGCTTACGGGTC TGCAGAGAGACTCCGAGGTGCTGTATGTGGGCACCTTTAGTTCCAACGAG GACAGTGTCGGCAAGCGCGGCAAGATCAGCGATGTTTTTGAGTGCATGGA GGCCGATGAGTTGGACCACAGCGATAACCGCAGTGGCTATAGCTCTACTT TAGCGCGTTCCTTCTCCCAACCGGATATTCTGGGGGATGGTCAGTTGACC CAGGAACTAAGCGAGGAAGTGACCCTCCAGAGACCCGTTGGACTCTTCGA TAGACCCACCATGCTGGGCAGCATTGCCTTTCGTCGATCCGTAACTGCTG CTTTAAGTCAGCTTCAACTGCACACGGACACCAGTTCCACTTCCACGATG CGGAATGCGGGCAGCAATCCTCCAAAGACACGAAATGGCGGAGGAAAGGG TCGTTTATATTTGAACCTTTCGGATGATACGGACTCGGAGGGCGGCGGTC ATGACATCTATAGCGATGATGACGACGACGACCGAGATGCCGGAGGAAGT GCCTTGCAGCGATTCCTGGCCGTTTGGGCCCTGGAAGAATACCTGCCAGT ATTTCAGAAGCAAGAGATCGACTTGGAGACTCTGATGCTGCTCACAGAAT CGGACCTTAAGTCACTTGGCTTGCCACTGGGGCCATTCCGTAAACTCACC TTCGCCATTCAGGAGAGACGTAACGCCCTGGCCAATCCCGGACCCCTGGT AGACAGTCGACTGTAGTAGTTGGCCTAATCATTCTATTTTTTTTGTAATA CTTCAACATGTTCAATTAGCCTAGTGTACATACTAAATTAAAGCCTAACA ATTATCACTCCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sans-RB | 2055 | Sans-RB | 191..2052 | 1..1862 | 9310 | 100 | Plus |
Sans-RA | 2062 | Sans-RA | 360..2059 | 163..1862 | 8500 | 100 | Plus |
Sans.a | 1792 | Sans.a | 93..1792 | 162..1861 | 8500 | 100 | Plus |
Sans-RA | 2062 | Sans-RA | 191..352 | 1..162 | 810 | 100 | Plus |
Sans.a | 1792 | Sans.a | 34..93 | 1..60 | 300 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8826412..8827407 | 605..1600 | 4980 | 100 | Plus |
chr2R | 21145070 | chr2R | 8827477..8827737 | 1601..1861 | 1305 | 100 | Plus |
chr2R | 21145070 | chr2R | 8826099..8826321 | 382..604 | 1115 | 100 | Plus |
chr2R | 21145070 | chr2R | 8824253..8824414 | 1..162 | 810 | 100 | Plus |
chr2R | 21145070 | chr2R | 8825893..8826036 | 239..382 | 720 | 100 | Plus |
chr2R | 21145070 | chr2R | 8825724..8825800 | 162..238 | 385 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12939087..12940082 | 605..1600 | 4980 | 100 | Plus |
2R | 25286936 | 2R | 12940152..12940413 | 1601..1862 | 1310 | 100 | Plus |
2R | 25286936 | 2R | 12938774..12938996 | 382..604 | 1115 | 100 | Plus |
2R | 25286936 | 2R | 12936928..12937089 | 1..162 | 810 | 100 | Plus |
2R | 25286936 | 2R | 12938568..12938711 | 239..382 | 720 | 100 | Plus |
2R | 25286936 | 2R | 12938399..12938475 | 162..238 | 385 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12940286..12941281 | 605..1600 | 4980 | 100 | Plus |
2R | 25260384 | 2R | 12941351..12941612 | 1601..1862 | 1310 | 100 | Plus |
2R | 25260384 | 2R | 12939973..12940195 | 382..604 | 1115 | 100 | Plus |
2R | 25260384 | 2R | 12938127..12938288 | 1..162 | 810 | 100 | Plus |
2R | 25260384 | 2R | 12939767..12939910 | 239..382 | 720 | 100 | Plus |
2R | 25260384 | 2R | 12939598..12939674 | 162..238 | 385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8824253..8824414 | 1..162 | 100 | -> | Plus |
chr2R | 8825725..8825800 | 163..238 | 100 | -> | Plus |
chr2R | 8825893..8826036 | 239..382 | 100 | -> | Plus |
chr2R | 8826100..8826321 | 383..604 | 100 | -> | Plus |
chr2R | 8826412..8827407 | 605..1600 | 100 | -> | Plus |
chr2R | 8827477..8827737 | 1601..1861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sans-RB | 1..1551 | 216..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sans-RB | 1..1551 | 216..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sans-RA | 1..1551 | 216..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sans-RB | 1..1551 | 216..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sans-RA | 1..1551 | 216..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sans-RB | 34..1894 | 1..1861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sans-RB | 34..1894 | 1..1861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sans-RB | 38..1898 | 1..1861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sans-RB | 34..1894 | 1..1861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sans-RB | 38..1898 | 1..1861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12936928..12937089 | 1..162 | 100 | -> | Plus |
2R | 12938400..12938475 | 163..238 | 100 | -> | Plus |
2R | 12938568..12938711 | 239..382 | 100 | -> | Plus |
2R | 12938775..12938996 | 383..604 | 100 | -> | Plus |
2R | 12939087..12940082 | 605..1600 | 100 | -> | Plus |
2R | 12940152..12940412 | 1601..1861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12936928..12937089 | 1..162 | 100 | -> | Plus |
2R | 12938400..12938475 | 163..238 | 100 | -> | Plus |
2R | 12938568..12938711 | 239..382 | 100 | -> | Plus |
2R | 12938775..12938996 | 383..604 | 100 | -> | Plus |
2R | 12939087..12940082 | 605..1600 | 100 | -> | Plus |
2R | 12940152..12940412 | 1601..1861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12936928..12937089 | 1..162 | 100 | -> | Plus |
2R | 12938400..12938475 | 163..238 | 100 | -> | Plus |
2R | 12938568..12938711 | 239..382 | 100 | -> | Plus |
2R | 12938775..12938996 | 383..604 | 100 | -> | Plus |
2R | 12939087..12940082 | 605..1600 | 100 | -> | Plus |
2R | 12940152..12940412 | 1601..1861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8827657..8827917 | 1601..1861 | 100 | Plus | |
arm_2R | 8824433..8824594 | 1..162 | 100 | -> | Plus |
arm_2R | 8825905..8825980 | 163..238 | 100 | -> | Plus |
arm_2R | 8826073..8826216 | 239..382 | 100 | -> | Plus |
arm_2R | 8826280..8826501 | 383..604 | 100 | -> | Plus |
arm_2R | 8826592..8827587 | 605..1600 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12939974..12940195 | 383..604 | 100 | -> | Plus |
2R | 12940286..12941281 | 605..1600 | 100 | -> | Plus |
2R | 12941351..12941611 | 1601..1861 | 100 | Plus | |
2R | 12938127..12938288 | 1..162 | 100 | -> | Plus |
2R | 12939599..12939674 | 163..238 | 100 | -> | Plus |
2R | 12939767..12939910 | 239..382 | 100 | -> | Plus |
Translation from 215 to 1765
> LD20463.pep MSSDRFHKAAKDGLLDVLAAATRKDTNAKDSDSMTPVMWAAFEGRLDALR LLCGRGGDPDKCDQFGNTALHLASAKGHLHCVDFLVKFGVNIYALDIDKH SAKDLAAINGRDEILRYLDVAFTNFEATEKKKSKALKELAEKNCEKRVRE YMKRQNQQQQRQDPEYSDLSAPSGSSKTGNMLSTLKQKIWSSQGNLNKTP RDTPPPTKFSDLVGNGSSSSGGSTIASRAGTVQKRPSQLQKQHSSTCPHS KISSDTDGGFKVREVEPDGKRTITSLTGLQRDSEVLYVGTFSSNEDSVGK RGKISDVFECMEADELDHSDNRSGYSSTLARSFSQPDILGDGQLTQELSE EVTLQRPVGLFDRPTMLGSIAFRRSVTAALSQLQLHTDTSSTSTMRNAGS NPPKTRNGGGKGRLYLNLSDDTDSEGGGHDIYSDDDDDDRDAGGSALQRF LAVWALEEYLPVFQKQEIDLETLMLLTESDLKSLGLPLGPFRKLTFAIQE RRNALANPGPLVDSRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12931-PA | 523 | GF12931-PA | 1..523 | 1..516 | 2289 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20348-PA | 516 | GG20348-PA | 1..516 | 1..516 | 2681 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20306-PA | 542 | GH20306-PA | 1..542 | 1..516 | 1894 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sans-PB | 516 | CG13320-PB | 1..516 | 1..516 | 2656 | 100 | Plus |
Sans-PA | 516 | CG13320-PA | 1..516 | 1..516 | 2656 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19976-PA | 528 | GI19976-PA | 1..528 | 1..516 | 1709 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16989-PA | 526 | GL16989-PA | 1..526 | 1..516 | 2211 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12202-PA | 526 | GA12202-PA | 1..526 | 1..516 | 2215 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21435-PA | 516 | GM21435-PA | 1..516 | 1..516 | 2685 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21229-PA | 529 | GJ21229-PA | 1..529 | 1..516 | 1933 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20770-PA | 509 | GK20770-PA | 1..509 | 1..516 | 1981 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12507-PA | 516 | GE12507-PA | 1..516 | 1..516 | 2679 | 97.5 | Plus |
Translation from 215 to 1765
> LD20463.hyp MSSDRFHKAAKDGLLDVLAAATRKDTNAKDSDSMTPVMWAAFEGRLDALR LLCGRGGDPDKCDQFGNTALHLASAKGHLHCVDFLVKFGVNIYALDIDKH SAKDLAAINGRDEILRYLDVAFTNFEATEKKKSKALKELAEKNCEKRVRE YMKRQNQQQQRQDPEYSDLSAPSGSSKTGNMLSTLKQKIWSSQGNLNKTP RDTPPPTKFSDLVGNGSSSSGGSTIASRAGTVQKRPSQLQKQHSSTCPHS KISSDTDGGFKVREVEPDGKRTITSLTGLQRDSEVLYVGTFSSNEDSVGK RGKISDVFECMEADELDHSDNRSGYSSTLARSFSQPDILGDGQLTQELSE EVTLQRPVGLFDRPTMLGSIAFRRSVTAALSQLQLHTDTSSTSTMRNAGS NPPKTRNGGGKGRLYLNLSDDTDSEGGGHDIYSDDDDDDRDAGGSALQRF LAVWALEEYLPVFQKQEIDLETLMLLTESDLKSLGLPLGPFRKLTFAIQE RRNALANPGPLVDSRL*