BDGP Sequence Production Resources |
Search the DGRC for LD20793
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 207 |
Well: | 93 |
Vector: | pBS SK- |
Associated Gene/Transcript | Peritrophin-A-RA |
Protein status: | LD20793.pep: gold |
Preliminary Size: | 1351 |
Sequenced Size: | 1230 |
Gene | Date | Evidence |
---|---|---|
CG17058 | 2001-01-01 | Release 2 assignment |
CG17058 | 2001-11-29 | Blastp of sequenced clone |
CG17058 | 2003-01-01 | Sim4 clustering to Release 3 |
Peritrophin-A | 2008-04-29 | Release 5.5 accounting |
Peritrophin-A | 2008-08-15 | Release 5.9 accounting |
Peritrophin-A | 2008-12-18 | 5.12 accounting |
1230 bp (1230 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069467
> LD20793.complete TTAAAACGTACAATCTTGGAGCGGAAGTTTCAAGTTTCTCCATTCCACTT TTTGCGCGCATTTGAATATATATATATTTTTTTTACGGCACCAAACATGC AGCGATTCCAAGTGTGCAGCGTCCTGATCCTGGCCTGGATTGCCTGTGGA CATGCCCTGGCCGTGGGATCCCCGGAGTGCCCCGAGAAGTACGGCGTGCA GGCGTACGCCCACACGGAGAACTGCGACCAGTTCTTCCTCTGCACCAACG GCACCCTGACCCTGGAGACCTGCGAGAACGGACTGCTCTTCGATGGCAAG GGCGCGGTGCACAACCACTGCAACTACAACTGGGCGGTGGACTGCAAGGG CCGCCAGTGGGATCCCACTCCCATTTCCACGCCGGCCTGCGAGTACCAGT TCGGTCTGTACGCTGTCTCCAAGGACTGCTCCACCACCTACATCAAGTGC GCCCACGGTGAGCCGCACGAGCAGGACTGCGACGCCGGGTTGGCCTACGA CGAAAGGATCCATGGCTGCAACTGGCCGGATCAGCTGCTGGAGCACTGCA ATCCCGAGGCGGTCGTTGGCTTCAAGTGCCCCACCAAGGTGGACCCCAAC TCGGTGGCCGCTCGCTTCTGGCCCTTCCCCCGGTTCCCCGTCGCCGGCGA CTGCCACCGCCTGATCACTTGCGTGGAGGGCCATCCGCGCCTGATCAGCT GCGGCGAGGACAAGGTCTTCGACGAGCACACGCTGACCTGCGAGGACCCG GAGTACGCCAGCGGCAGCTGTGCCAACTACGGCAAGTAGGGATCGCCGAG CGATCTGTACATGCACACGAACAAACAAACTGCAACAGTGCAATCTCGAT AATGTGAACGTTCAAATTAAAGGAGATACATATGTACATATGTATGTACT TGCTGGCTGCAAATTTGGAGTTATGTTGTTTTGCAGACAACCCCCCCCTC CTAGGTTTACACTGGTTCGCTGCTTCGAGTGCGCACTGTAGGCTCCGACT AACCAACTACTTTCGTCCCTTCATCTCCGCACCTTCGCTGCACTGTAAAA AATGTCCTAGCCCAGTTAGCTTGTTAACCTTTTTGCTTTCTAACCAACCA ACCGTCTGTATCTTGCTCTTCTTTCTGTATTATTAACTTGTTTTGTTGTT TGGTCTCTTTTGTATATGAATCGCAATAAAGTTAATTTTATTTATTGTAC ATTACATCAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Peritrophin-A-RA | 1390 | Peritrophin-A-RA | 36..1245 | 1..1210 | 6050 | 100 | Plus |
Peritrophin-A-RB | 1490 | Peritrophin-A-RB | 222..1345 | 87..1210 | 5620 | 100 | Plus |
Peritrophin-A-RB | 1490 | Peritrophin-A-RB | 26..113 | 1..88 | 440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20113121..20113770 | 559..1208 | 3235 | 99.8 | Plus |
chrX | 22417052 | chrX | 20112477..20112693 | 148..364 | 1085 | 100 | Plus |
chrX | 22417052 | chrX | 20112765..20112959 | 365..559 | 945 | 99 | Plus |
chrX | 22417052 | chrX | 20110255..20110342 | 1..88 | 440 | 100 | Plus |
chrX | 22417052 | chrX | 20110451..20110513 | 87..149 | 315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 20247548..20248199 | 559..1210 | 3260 | 100 | Plus |
X | 23542271 | X | 20246904..20247120 | 148..364 | 1085 | 100 | Plus |
X | 23542271 | X | 20247192..20247386 | 365..559 | 975 | 100 | Plus |
X | 23542271 | X | 20244677..20244764 | 1..88 | 440 | 100 | Plus |
X | 23542271 | X | 20244873..20244935 | 87..149 | 315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 20232687..20233338 | 559..1210 | 3260 | 100 | Plus |
X | 23527363 | X | 20232043..20232259 | 148..364 | 1085 | 100 | Plus |
X | 23527363 | X | 20232331..20232525 | 365..559 | 975 | 100 | Plus |
X | 23527363 | X | 20229816..20229903 | 1..88 | 440 | 100 | Plus |
X | 23527363 | X | 20230012..20230074 | 87..149 | 315 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20110428..20110512 | 64..148 | 87 | -> | Plus |
chrX | 20112478..20112693 | 149..364 | 100 | -> | Plus |
chrX | 20110255..20110317 | 1..63 | 100 | -> | Plus |
chrX | 20112765..20112959 | 365..559 | 98 | -> | Plus |
chrX | 20113122..20113770 | 560..1208 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Peritrophin-A-RB | 1..693 | 97..789 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Peritrophin-A-RB | 1..693 | 97..789 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Peritrophin-A-RA | 1..693 | 97..789 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Peritrophin-A-RB | 1..693 | 97..789 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Peritrophin-A-RA | 1..693 | 97..789 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Peritrophin-A-RA | 25..1232 | 1..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Peritrophin-A-RA | 25..1232 | 1..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Peritrophin-A-RA | 31..1238 | 1..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Peritrophin-A-RA | 25..1232 | 1..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Peritrophin-A-RA | 31..1238 | 1..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20244677..20244763 | 1..87 | 100 | -> | Plus |
X | 20244874..20244934 | 88..148 | 100 | -> | Plus |
X | 20246905..20247120 | 149..364 | 100 | -> | Plus |
X | 20247192..20247386 | 365..559 | 100 | -> | Plus |
X | 20247549..20248197 | 560..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20244677..20244763 | 1..87 | 100 | -> | Plus |
X | 20244874..20244934 | 88..148 | 100 | -> | Plus |
X | 20246905..20247120 | 149..364 | 100 | -> | Plus |
X | 20247192..20247386 | 365..559 | 100 | -> | Plus |
X | 20247549..20248197 | 560..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20244677..20244763 | 1..87 | 100 | -> | Plus |
X | 20244874..20244934 | 88..148 | 100 | -> | Plus |
X | 20246905..20247120 | 149..364 | 100 | -> | Plus |
X | 20247192..20247386 | 365..559 | 100 | -> | Plus |
X | 20247549..20248197 | 560..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20115751..20115837 | 1..87 | 100 | -> | Plus |
arm_X | 20115948..20116008 | 88..148 | 100 | -> | Plus |
arm_X | 20117979..20118194 | 149..364 | 100 | -> | Plus |
arm_X | 20118266..20118460 | 365..559 | 100 | -> | Plus |
arm_X | 20118623..20119271 | 560..1208 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20232044..20232259 | 149..364 | 100 | -> | Plus |
X | 20232331..20232525 | 365..559 | 100 | -> | Plus |
X | 20232688..20233336 | 560..1208 | 100 | Plus | |
X | 20229816..20229902 | 1..87 | 100 | -> | Plus |
X | 20230013..20230073 | 88..148 | 100 | -> | Plus |
Translation from 0 to 788
> LD20793.hyp LKRTILERKFQVSPFHFLRAFEYIYIFFTAPNMQRFQVCSVLILAWIACG HALAVGSPECPEKYGVQAYAHTENCDQFFLCTNGTLTLETCENGLLFDGK GAVHNHCNYNWAVDCKGRQWDPTPISTPACEYQFGLYAVSKDCSTTYIKC AHGEPHEQDCDAGLAYDERIHGCNWPDQLLEHCNPEAVVGFKCPTKVDPN SVAARFWPFPRFPVAGDCHRLITCVEGHPRLISCGEDKVFDEHTLTCEDP EYASGSCANYGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Peritrophin-A-PB | 230 | CG17058-PB | 1..230 | 33..262 | 1329 | 100 | Plus |
Peritrophin-A-PA | 230 | CG17058-PA | 1..230 | 33..262 | 1329 | 100 | Plus |
Peritrophin-A-PC | 157 | CG17058-PC | 1..157 | 33..189 | 897 | 98.1 | Plus |
Gasp-PB | 235 | CG10287-PB | 1..221 | 33..260 | 322 | 34.6 | Plus |
Gasp-PA | 258 | CG10287-PA | 1..221 | 33..260 | 322 | 34.6 | Plus |
Translation from 96 to 788
> LD20793.pep MQRFQVCSVLILAWIACGHALAVGSPECPEKYGVQAYAHTENCDQFFLCT NGTLTLETCENGLLFDGKGAVHNHCNYNWAVDCKGRQWDPTPISTPACEY QFGLYAVSKDCSTTYIKCAHGEPHEQDCDAGLAYDERIHGCNWPDQLLEH CNPEAVVGFKCPTKVDPNSVAARFWPFPRFPVAGDCHRLITCVEGHPRLI SCGEDKVFDEHTLTCEDPEYASGSCANYGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20240-PA | 230 | GF20240-PA | 1..230 | 1..230 | 1210 | 96.5 | Plus |
Dana\GF18629-PA | 257 | GF18629-PA | 1..223 | 1..229 | 289 | 34 | Plus |
Dana\GF14304-PA | 237 | GF14304-PA | 11..205 | 25..216 | 249 | 32 | Plus |
Dana\GF20239-PA | 239 | GF20239-PA | 1..226 | 1..223 | 247 | 28.8 | Plus |
Dana\GF14303-PA | 242 | GF14303-PA | 1..214 | 1..217 | 236 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19276-PA | 230 | GG19276-PA | 1..230 | 1..230 | 1231 | 99.6 | Plus |
Dere\GG10600-PA | 258 | GG10600-PA | 1..223 | 1..229 | 291 | 34 | Plus |
Dere\GG24283-PA | 250 | GG24283-PA | 1..217 | 1..216 | 278 | 31.9 | Plus |
Dere\GG19275-PA | 237 | GG19275-PA | 2..224 | 3..223 | 245 | 28.2 | Plus |
Dere\GG10079-PA | 333 | GG10079-PA | 85..270 | 27..216 | 222 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12618-PA | 230 | GH12618-PA | 1..230 | 1..230 | 1152 | 92.6 | Plus |
Dgri\GH12620-PA | 197 | GH12620-PA | 3..197 | 15..230 | 883 | 79.6 | Plus |
Dgri\GH14287-PA | 255 | GH14287-PA | 1..223 | 1..229 | 285 | 33.6 | Plus |
Dgri\GH10689-PA | 249 | GH10689-PA | 1..213 | 1..217 | 257 | 31.7 | Plus |
Dgri\GH10690-PA | 237 | GH10690-PA | 10..205 | 24..216 | 246 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Peritrophin-A-PB | 230 | CG17058-PB | 1..230 | 1..230 | 1329 | 100 | Plus |
Peritrophin-A-PA | 230 | CG17058-PA | 1..230 | 1..230 | 1329 | 100 | Plus |
Peritrophin-A-PC | 157 | CG17058-PC | 1..157 | 1..157 | 897 | 98.1 | Plus |
Gasp-PB | 235 | CG10287-PB | 1..221 | 1..228 | 322 | 34.6 | Plus |
Gasp-PA | 258 | CG10287-PA | 1..221 | 1..228 | 322 | 34.6 | Plus |
obst-E-PB | 249 | CG11142-PB | 9..217 | 12..216 | 309 | 34.4 | Plus |
obst-E-PA | 242 | CG11142-PA | 1..216 | 1..219 | 271 | 30.9 | Plus |
obst-A-PB | 237 | CG17052-PB | 5..230 | 6..230 | 269 | 29.3 | Plus |
obst-A-PA | 237 | CG17052-PA | 5..230 | 6..230 | 269 | 29.3 | Plus |
obst-B-PA | 337 | CG4778-PA | 85..270 | 27..216 | 243 | 32 | Plus |
CG10154-PB | 316 | CG10154-PB | 128..313 | 26..220 | 148 | 24.7 | Plus |
CG10154-PA | 316 | CG10154-PA | 128..313 | 26..220 | 148 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11033-PA | 230 | GI11033-PA | 1..230 | 1..230 | 1156 | 93.5 | Plus |
Dmoj\GI23181-PA | 256 | GI23181-PA | 1..223 | 1..229 | 293 | 34.5 | Plus |
Dmoj\GI11221-PA | 233 | GI11221-PA | 11..207 | 23..216 | 262 | 33.2 | Plus |
Dmoj\GI11215-PA | 247 | GI11215-PA | 1..214 | 1..217 | 243 | 32.1 | Plus |
Dmoj\GI11032-PA | 247 | GI11032-PA | 2..224 | 3..223 | 237 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13083-PA | 230 | GL13083-PA | 1..230 | 1..230 | 1160 | 92.2 | Plus |
Dper\GL23484-PA | 259 | GL23484-PA | 1..223 | 1..229 | 282 | 33.6 | Plus |
Dper\GL19117-PA | 227 | GL19117-PA | 3..201 | 21..216 | 249 | 31.4 | Plus |
Dper\GL13082-PA | 238 | GL13082-PA | 2..225 | 3..223 | 249 | 28.6 | Plus |
Dper\GL19116-PA | 243 | GL19116-PA | 1..216 | 1..219 | 244 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14302-PA | 230 | GA14302-PA | 1..230 | 1..230 | 1170 | 93 | Plus |
Dpse\GA10221-PA | 259 | GA10221-PA | 1..223 | 1..229 | 282 | 33.6 | Plus |
Dpse\GA14300-PA | 238 | GA14300-PA | 2..225 | 3..223 | 249 | 28.6 | Plus |
Dpse\GA25356-PA | 228 | GA25356-PA | 4..202 | 21..216 | 247 | 31.4 | Plus |
Dpse\GA10790-PA | 243 | GA10790-PA | 1..216 | 1..219 | 243 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23015-PA | 230 | GM23015-PA | 1..230 | 1..230 | 1226 | 99.1 | Plus |
Dsec\GM10569-PA | 258 | GM10569-PA | 1..223 | 1..229 | 294 | 34 | Plus |
Dsec\GM17998-PA | 242 | GM17998-PA | 1..216 | 1..219 | 242 | 31.2 | Plus |
Dsec\GM17883-PA | 334 | GM17883-PA | 85..270 | 27..216 | 222 | 32 | Plus |
Dsec\GM23014-PA | 226 | GM23014-PA | 2..213 | 3..223 | 218 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17481-PA | 230 | GD17481-PA | 1..230 | 1..230 | 1229 | 99.1 | Plus |
Dsim\GD19561-PA | 258 | GD19561-PA | 1..223 | 1..229 | 290 | 34 | Plus |
Dsim\GD22632-PA | 249 | GD22632-PA | 1..217 | 1..216 | 279 | 33.2 | Plus |
Dsim\GD23651-PA | 334 | GD23651-PA | 85..270 | 27..216 | 222 | 32 | Plus |
Dsim\GD17480-PA | 429 | GD17480-PA | 168..337 | 20..189 | 188 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15814-PA | 230 | GJ15814-PA | 1..230 | 1..230 | 1144 | 92.6 | Plus |
Dvir\GJ14495-PA | 256 | GJ14495-PA | 1..223 | 1..229 | 284 | 33.6 | Plus |
Dvir\GJ18328-PA | 247 | GJ18328-PA | 1..214 | 1..217 | 253 | 31.2 | Plus |
Dvir\GJ18329-PA | 242 | GJ18329-PA | 14..210 | 23..216 | 248 | 31.7 | Plus |
Dvir\GJ15813-PA | 237 | GJ15813-PA | 2..224 | 3..223 | 227 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25194-PA | 233 | GK25194-PA | 2..233 | 1..230 | 1153 | 92.2 | Plus |
Dwil\GK14210-PA | 256 | GK14210-PA | 1..223 | 1..229 | 291 | 34.5 | Plus |
Dwil\GK15421-PA | 234 | GK15421-PA | 6..202 | 23..216 | 253 | 33.7 | Plus |
Dwil\GK15420-PA | 244 | GK15420-PA | 1..214 | 1..217 | 232 | 30.6 | Plus |
Dwil\GK25193-PA | 233 | GK25193-PA | 8..223 | 12..223 | 227 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17865-PA | 230 | GE17865-PA | 1..230 | 1..230 | 1229 | 99.1 | Plus |
Dyak\GE24117-PA | 258 | GE24117-PA | 1..223 | 1..229 | 292 | 34 | Plus |
Dyak\GE18979-PA | 249 | GE18979-PA | 1..217 | 1..216 | 260 | 30.7 | Plus |
Dyak\GE17864-PA | 237 | GE17864-PA | 2..224 | 3..223 | 246 | 28.2 | Plus |
Dyak\GE18893-PA | 334 | GE18893-PA | 63..270 | 5..216 | 220 | 30.1 | Plus |