BDGP Sequence Production Resources |
Search the DGRC for LD20874
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 208 |
Well: | 74 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG2201-RA |
Protein status: | LD20874.pep: gold |
Preliminary Size: | 1925 |
Sequenced Size: | 2005 |
Gene | Date | Evidence |
---|---|---|
CG2201 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2201 | 2005-01-26 | Blastp of sequenced clone |
CG2201 | 2008-04-29 | Release 5.5 accounting |
CG2201 | 2008-08-15 | Release 5.9 accounting |
CG2201 | 2008-12-18 | 5.12 accounting |
2005 bp (2005 high quality bases) assembled on 2005-01-26
GenBank Submission: BT021392
> LD20874.complete TGAGTAGGCGCTTTGAAACCGTTAACGGAGACTGCGTATATACTCAATGT TATTTTATATTGCACTATAATAAAAACCACGTGACGCCCAATTCACCGCA AAAATCTGTTTTTGAAGTGCTGCTGTCAGACACCGCTTATTTGTCGGTGC CTGGCTTCCAAAATTAAATTACCAAAATTAAAATACCATAAATAAATAAG AAAGCGAAGGACAATGGCCACCAACCTGCAAAAGGCCACCCTTGAGGAAA TTCGACATGCGGCCGCGCGTATTTGCCGAGACTATCTAACTGGGCCCTGG AAAGTGGTTACTCCGGAGAGTTTGGTAGTGAAGCGCATAAGTGGCGGGCT GTCAAATTTCTTGTATTACGTAAGCCTTCCCGATTTAAATGACTACGATG AGCTGGACGAACAGAAACAGCAGCAGGAAGACATCATAGGGGCCACCGCA ACTGTGACCAATAGAAGCGGAGTTTTCATACACGACGATGAGTCGGCTGC CAAGGCGGTGGGCGTAACATTGATGGCGAGGGAATTAATAAATAACGATG ACGTCGCCGACGCAGCTCCTGGCGCCACACAAGCACACAAACGTCAGCGA TGCGATAGTAATAGTCGCGAATGCAGTTCTTCGAAACGATTGCACGCCCC CAAGCAGCAACCCCGTGAGGTCCTTCTGCGAATATATGGTCAGACCCATG GTGATCACGCCCTGGAGAGCATGATTACCGAGTCCGTGGTTTTCGCCCTT CTCAGTGAACGGAACTATGGGCCCAAACTGCACGGAATCTTTCCGGGCGG ACGTATTGAACAATATATTCCGGCACGCGCTTTGACCACAGCAGAATTGG GAGAGCAACGAATATTAAAGAGAGTGGCTGAGAAAATGGGTGAGATCCAC AGTCTTAATATACCCATGTCTAAGGAGCCCGATTGGATTTGGAATTGTAT GCAGCGTTGGGTTTCCGGTTTAGAGAGCATTGTTAACGGCAGTGTCCAAA CGAATCAAAAATCTTCGGTACTGAAGAAGCAAATGGAATTGATGCGGACC TTTGACTACGTTCAAGAGATGGCCTGGATTAGGTCGATTATCGATGAAGG AGATTATCCAGTTGTGTTCTGTCATAATGATCTGCAAGAAGGTAATATTC TGATGCGACAACCGTCAGCTGGTCAAAACGAACGGACCCCCCGGGAGTCA ATCAGTAGCCTGAGATCCAACTTCGACGAAACTTTGGGTGATAGCCTTGA TGGAAATAGCAATATATCGGATACGGAGACACACAAATCACGTAGCGTGT CGCCTTCACCATGCCCGGAGTTGGACACTACGAATGACTCAGCCCTGGAT TCCAGCTTCATGGCCGATAATGAGCCGGATCTTATTATCATCGACTTTGA GTATTGTGCCTACAACTACCGTGGCTATGATCTTGCCAATCATTTTATTG AGTGGACTTTCGACTACACTAACCCACAGTTCCCTTACTTCTACCACAAC TCCAGCAACTGCGCAACTGTTCAGCAACGGCGCGACTTCATTGTAAACTA TTTAAAGAAATTTCACGATGACGAGAACTATAATATCACTGGCCAGGAGT TGATGAAGGTAGACGCTGAGATTCAGTTCTTTACAATGCTGTCTCATCTG TTCTGGAGCCTTTGGTCCGTAATTAATGTCACATCGGCGATTGAGTTTGG TTATTGGGAATATGGTATTGCTCGAATTTTGGAATATCAAAAGCTAAAGG CAGCTTATCAAGCTAATTAAGACAAATATCTGAACCTTTATATAAATCGA ATCAGAACCATAGTTAACTAGCCTAGACTTAATTGACCTTGCAATACCTG TCCGTCTTTGTCCGTGTCTAGAAATATTTTTAACTAAAAATGTTTGAATA GTTCATACAAAACATTAAATAACATCGAACTACTTTAAAAGACTATTAAA ATTTGTAATAAATAATTTATTTTACATAATTGAAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 21613596..21614020 | 1708..1284 | 2125 | 100 | Minus |
chr2L | 23010047 | chr2L | 21614676..21615068 | 1214..822 | 1965 | 100 | Minus |
chr2L | 23010047 | chr2L | 21615986..21616317 | 671..340 | 1660 | 100 | Minus |
chr2L | 23010047 | chr2L | 21613260..21613535 | 1982..1707 | 1380 | 100 | Minus |
chr2L | 23010047 | chr2L | 21621857..21622091 | 235..1 | 1160 | 99.6 | Minus |
chr2L | 23010047 | chr2L | 21615773..21615928 | 823..668 | 780 | 100 | Minus |
chr2L | 23010047 | chr2L | 21616498..21616606 | 341..233 | 545 | 100 | Minus |
chr2L | 23010047 | chr2L | 21614102..21614172 | 1283..1213 | 355 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21615102..21615526 | 1708..1284 | 2125 | 100 | Minus |
2L | 23513712 | 2L | 21616182..21616574 | 1214..822 | 1965 | 100 | Minus |
2L | 23513712 | 2L | 21617492..21617823 | 671..340 | 1660 | 100 | Minus |
2L | 23513712 | 2L | 21614762..21615041 | 1986..1707 | 1400 | 100 | Minus |
2L | 23513712 | 2L | 21623365..21623599 | 235..1 | 1175 | 100 | Minus |
2L | 23513712 | 2L | 21617279..21617434 | 823..668 | 780 | 100 | Minus |
2L | 23513712 | 2L | 21618004..21618112 | 341..233 | 545 | 100 | Minus |
2L | 23513712 | 2L | 21615608..21615678 | 1283..1213 | 355 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21615102..21615526 | 1708..1284 | 2125 | 100 | Minus |
2L | 23513712 | 2L | 21616182..21616574 | 1214..822 | 1965 | 100 | Minus |
2L | 23513712 | 2L | 21617492..21617823 | 671..340 | 1660 | 100 | Minus |
2L | 23513712 | 2L | 21614762..21615041 | 1986..1707 | 1400 | 100 | Minus |
2L | 23513712 | 2L | 21623365..21623599 | 235..1 | 1175 | 100 | Minus |
2L | 23513712 | 2L | 21617279..21617434 | 823..668 | 780 | 100 | Minus |
2L | 23513712 | 2L | 21618004..21618112 | 341..233 | 545 | 100 | Minus |
2L | 23513712 | 2L | 21615608..21615678 | 1283..1213 | 355 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 21613260..21613534 | 1708..1982 | 100 | <- | Minus |
chr2L | 21613597..21614020 | 1284..1707 | 100 | <- | Minus |
chr2L | 21614102..21614170 | 1215..1283 | 100 | <- | Minus |
chr2L | 21614676..21615067 | 823..1214 | 100 | <- | Minus |
chr2L | 21615774..21615926 | 670..822 | 100 | <- | Minus |
chr2L | 21615988..21616315 | 342..669 | 100 | <- | Minus |
chr2L | 21616498..21616604 | 235..341 | 100 | <- | Minus |
chr2L | 21621858..21622091 | 1..234 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2201-RA | 1..1557 | 214..1770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2201-RA | 1..1557 | 214..1770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2201-RA | 1..1557 | 214..1770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2201-RA | 1..1557 | 214..1770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2201-RA | 1..1557 | 214..1770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2201-RA | 1..1982 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2201-RA | 1..1982 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2201-RA | 29..2010 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2201-RA | 1..1982 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2201-RA | 29..2010 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21618004..21618110 | 235..341 | 100 | <- | Minus |
2L | 21614766..21615040 | 1708..1982 | 100 | <- | Minus |
2L | 21615103..21615526 | 1284..1707 | 100 | <- | Minus |
2L | 21615608..21615676 | 1215..1283 | 100 | <- | Minus |
2L | 21616182..21616573 | 823..1214 | 100 | <- | Minus |
2L | 21617280..21617432 | 670..822 | 100 | <- | Minus |
2L | 21617494..21617821 | 342..669 | 100 | <- | Minus |
2L | 21623366..21623599 | 1..234 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21618004..21618110 | 235..341 | 100 | <- | Minus |
2L | 21614766..21615040 | 1708..1982 | 100 | <- | Minus |
2L | 21615103..21615526 | 1284..1707 | 100 | <- | Minus |
2L | 21615608..21615676 | 1215..1283 | 100 | <- | Minus |
2L | 21616182..21616573 | 823..1214 | 100 | <- | Minus |
2L | 21617280..21617432 | 670..822 | 100 | <- | Minus |
2L | 21617494..21617821 | 342..669 | 100 | <- | Minus |
2L | 21623366..21623599 | 1..234 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21618004..21618110 | 235..341 | 100 | <- | Minus |
2L | 21614766..21615040 | 1708..1982 | 100 | <- | Minus |
2L | 21615103..21615526 | 1284..1707 | 100 | <- | Minus |
2L | 21615608..21615676 | 1215..1283 | 100 | <- | Minus |
2L | 21616182..21616573 | 823..1214 | 100 | <- | Minus |
2L | 21617280..21617432 | 670..822 | 100 | <- | Minus |
2L | 21617494..21617821 | 342..669 | 100 | <- | Minus |
2L | 21623366..21623599 | 1..234 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 21618004..21618110 | 235..341 | 100 | <- | Minus |
arm_2L | 21614766..21615040 | 1708..1982 | 100 | <- | Minus |
arm_2L | 21615103..21615526 | 1284..1707 | 100 | <- | Minus |
arm_2L | 21615608..21615676 | 1215..1283 | 100 | <- | Minus |
arm_2L | 21616182..21616573 | 823..1214 | 100 | <- | Minus |
arm_2L | 21617280..21617432 | 670..822 | 100 | <- | Minus |
arm_2L | 21617494..21617821 | 342..669 | 100 | <- | Minus |
arm_2L | 21623366..21623599 | 1..234 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21623366..21623599 | 1..234 | 100 | Minus | |
2L | 21614766..21615040 | 1708..1982 | 100 | <- | Minus |
2L | 21615103..21615526 | 1284..1707 | 100 | <- | Minus |
2L | 21615608..21615676 | 1215..1283 | 100 | <- | Minus |
2L | 21616182..21616573 | 823..1214 | 100 | <- | Minus |
2L | 21617280..21617432 | 670..822 | 100 | <- | Minus |
2L | 21617494..21617821 | 342..669 | 100 | <- | Minus |
2L | 21618004..21618110 | 235..341 | 100 | <- | Minus |
Translation from 213 to 1769
> LD20874.pep MATNLQKATLEEIRHAAARICRDYLTGPWKVVTPESLVVKRISGGLSNFL YYVSLPDLNDYDELDEQKQQQEDIIGATATVTNRSGVFIHDDESAAKAVG VTLMARELINNDDVADAAPGATQAHKRQRCDSNSRECSSSKRLHAPKQQP REVLLRIYGQTHGDHALESMITESVVFALLSERNYGPKLHGIFPGGRIEQ YIPARALTTAELGEQRILKRVAEKMGEIHSLNIPMSKEPDWIWNCMQRWV SGLESIVNGSVQTNQKSSVLKKQMELMRTFDYVQEMAWIRSIIDEGDYPV VFCHNDLQEGNILMRQPSAGQNERTPRESISSLRSNFDETLGDSLDGNSN ISDTETHKSRSVSPSPCPELDTTNDSALDSSFMADNEPDLIIIDFEYCAY NYRGYDLANHFIEWTFDYTNPQFPYFYHNSSNCATVQQRRDFIVNYLKKF HDDENYNITGQELMKVDAEIQFFTMLSHLFWSLWSVINVTSAIEFGYWEY GIARILEYQKLKAAYQAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14425-PA | 529 | GF14425-PA | 1..526 | 1..515 | 1861 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21484-PA | 522 | GG21484-PA | 1..521 | 1..517 | 2530 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10948-PA | 577 | GH10948-PA | 45..576 | 6..517 | 1911 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2201-PG | 518 | CG2201-PG | 1..518 | 1..518 | 2730 | 100 | Plus |
CG2201-PA | 518 | CG2201-PA | 1..518 | 1..518 | 2730 | 100 | Plus |
CG2201-PF | 554 | CG2201-PF | 44..554 | 8..518 | 2696 | 100 | Plus |
CG2201-PB | 554 | CG2201-PB | 44..554 | 8..518 | 2696 | 100 | Plus |
CG2201-PC | 415 | CG2201-PC | 1..415 | 104..518 | 2206 | 100 | Plus |
CG2201-PE | 240 | CG2201-PE | 44..239 | 8..203 | 1014 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12154-PA | 571 | GI12154-PA | 44..568 | 6..515 | 1897 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25955-PA | 558 | GL25955-PA | 43..557 | 6..517 | 1984 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15298-PA | 567 | GA15298-PA | 50..566 | 6..517 | 1987 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16134-PA | 559 | GM16134-PA | 44..559 | 8..518 | 2508 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21635-PA | 520 | GD21635-PA | 1..520 | 1..518 | 2561 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14204-PA | 545 | GJ14204-PA | 44..544 | 6..517 | 1910 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24872-PA | 569 | GK24872-PA | 46..568 | 6..517 | 2019 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12985-PA | 524 | GE12985-PA | 1..523 | 1..517 | 2509 | 89.1 | Plus |
Translation from 213 to 1769
> LD20874.hyp MATNLQKATLEEIRHAAARICRDYLTGPWKVVTPESLVVKRISGGLSNFL YYVSLPDLNDYDELDEQKQQQEDIIGATATVTNRSGVFIHDDESAAKAVG VTLMARELINNDDVADAAPGATQAHKRQRCDSNSRECSSSKRLHAPKQQP REVLLRIYGQTHGDHALESMITESVVFALLSERNYGPKLHGIFPGGRIEQ YIPARALTTAELGEQRILKRVAEKMGEIHSLNIPMSKEPDWIWNCMQRWV SGLESIVNGSVQTNQKSSVLKKQMELMRTFDYVQEMAWIRSIIDEGDYPV VFCHNDLQEGNILMRQPSAGQNERTPRESISSLRSNFDETLGDSLDGNSN ISDTETHKSRSVSPSPCPELDTTNDSALDSSFMADNEPDLIIIDFEYCAY NYRGYDLANHFIEWTFDYTNPQFPYFYHNSSNCATVQQRRDFIVNYLKKF HDDENYNITGQELMKVDAEIQFFTMLSHLFWSLWSVINVTSAIEFGYWEY GIARILEYQKLKAAYQAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2201-PG | 518 | CG2201-PG | 1..518 | 1..518 | 2730 | 100 | Plus |
CG2201-PA | 518 | CG2201-PA | 1..518 | 1..518 | 2730 | 100 | Plus |
CG2201-PF | 554 | CG2201-PF | 44..554 | 8..518 | 2696 | 100 | Plus |
CG2201-PB | 554 | CG2201-PB | 44..554 | 8..518 | 2696 | 100 | Plus |
CG2201-PC | 415 | CG2201-PC | 1..415 | 104..518 | 2206 | 100 | Plus |