BDGP Sequence Production Resources |
Search the DGRC for LD20901
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 209 |
Well: | 1 |
Vector: | pBS SK- |
Associated Gene/Transcript | ApepP-RA |
Protein status: | LD20901.pep: gold |
Preliminary Size: | 1921 |
Sequenced Size: | 2098 |
Gene | Date | Evidence |
---|---|---|
CG6291 | 2001-01-01 | Release 2 assignment |
CG6291 | 2001-10-10 | Blastp of sequenced clone |
CG6291 | 2003-01-01 | Sim4 clustering to Release 3 |
ApepP | 2008-04-29 | Release 5.5 accounting |
ApepP | 2008-08-15 | Release 5.9 accounting |
ApepP | 2008-12-18 | 5.12 accounting |
2098 bp (2098 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061297
> LD20901.complete CGATATGAAATAATATAGTTCAGCATTTTTGACGTGCTATTAATTGCAAA ATTGAATGTGTCAGTGCAAAAAGATTATAAAATATTTGCACCCTGTAGTT TAAACAATAGTTTGACAGCCTTTTTATTTTGCTGCCATTGAGGAACCACA ATGAAGAGGAGCACCACCCAAATTCTGACCAGGTTGAGGGAGCTAATGCT CCGCGCCCAGGTGGGCGACTCCTGCGGCATATCGGCATACATTGTGCCCT CGGACGACGCCCATCAGTCGGAGTACCAGTGCCAGCATGACGAGCGACGC TCCTTTGTGAGTGGTTTCGATGGATCCGCTGGCACGGCGGTGATAACGAC GGAGACCGCACTGCTGTGGACCGACGGTCGTTACTATCAGCAGGCGGAGA AGCAGCTGGACTCCAATTGGGTTCTAATGCGGGATGGTCTGAGCGCCACC CCGTCGATTGGCGCCTGGCTGGCGAAGAATCTGCCCAAGGGCAGCTTTGT GGGCGTGGATCCTCGCCTGTTGTCGTTCCGCGTATGGAAACCCATCGAAA CGGAACTAAGCTCCGCGGAATGCCAGCTGGTGCCCATCGAAGGCAACCTC ATCGACGAGGTCTGGGGTGAGGATCAGCCACCGCAAACCTCAAACAAGAT TATAACCCTGAAACTAGAACATTCTGGCGTAACTATCGCCAAAAAATGGG ACGTGGTGCGCCAGCAGTTGAAGGAGAAGAATGCTGATGCCCTGGTGGTC AGTGCTCTCGATGAAATCGCTTGGTTCTTGAACCTACGCGGCTCGGACAT TGACTTCAACCCCGTCTTCTTCTCCTACTTGATTGTGACCAACGATGAAC TACTGCTCTTTGTGGACTCTGGCAAATTGCCCACTGATTTTGTGCAGCAT CAAAAGGAGAACAATGTGCAGATAAGCGTTTTGCCTTACGCCTCAATTGG CATTGAAATCAGTAAGATTGTGTCGACCAGGGAGTCAAAGATCTGGATAG CACCCACCAGCAGCTACTATCTAACTGCTTTGATACCCAAGTCACGTAGA ATTCAGGAGGTAACGCCGATTTGTGTGCTGAAGGCCATTAAGAACGATGT CGAGATCGCAGGCTTCATCAACAGCCACATTCGCGATGGAGTCGCTTTGT GTCAGTATTTCGCCTGGCTTGAGGATCAAGTGAATAAGGGTGCGGAAGTC GATGAAATGTCTGGTGCCGATAAACTCGAGTCCTTCCGGTCGACAAAGGA TAAGTACATGGGCCTTAGCTTCACCACAATTAGTGCTTCGGGACCCAACG GCTCTGTTATTCACTATCACCCAAAGAAGGAAACCAACAGGAAGATAAAT GACAAAGAGATTTATCTGTGTGATTCCGGAGCTCAATACTTGGATGGTAC TACGGATGTGACGAGGACCCTTCACTTCGGTGAACCCACTGAGTTTCAGA AGGAAGCCTACACTCGCGTTTTAAAGGGCCAACTGAGCTTCGGCTCCACC GTATTCCCAGCTAAGGTTAAGGGACAGGTTCTTGACACTCTAGCGAGGAA GGCCCTGTGGGACGTCGGTTTGGACTACGGACACGGAACCGGCCATGGAG TAGGTCACTTCCTAAATGTCCACGAAGGTCCCATGGGCGTAGGAATTCGA CTGATGCCCGACGATCCTGGTCTCCAGGCGAACATGTTTATTTCCAATGA GCCTGGTTTCTACCAGGACGGAGAGTTTGGCATCCGTGTCGAGGATATTG TTCAAATTGTGCCAGGCCAGGTGGCACACAATTTCTCCAACCGAGGCGCC CTCACATTCAAAACCATCACCATGTGCCCGAAGCAAACGAAAATGATTAA AAAGGAACTTCTATCGGATGCGGAAGTAAAGCTGCTCAACAGCTATCATC AACAAGTCTGGGACACTCTTTCCCCAATCCTATCTCGCGAAGGAGACGAA TTTACTCTGTCCTGGCTCAAAAAGGAAGTTCAGCCCATTTAATTGCATTT TTAACCCGTTATTTCGGTCATCTTTAACTAATATTCTTTCCCATGCATAC ACTTACTCTTTTCTCAAGACTAAAATATTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ApepP-RA | 2140 | ApepP-RA | 3..2091 | 1..2089 | 10445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16906891..16908846 | 124..2079 | 99 | <- | Minus |
chr2L | 16908971..16909093 | 1..123 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ApepP-RA | 1..1842 | 151..1992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ApepP-RB | 1..1842 | 151..1992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ApepP-RA | 1..1842 | 151..1992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ApepP-RA | 1..1842 | 151..1992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ApepP-RA | 1..1842 | 151..1992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ApepP-RA | 1..2079 | 1..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ApepP-RA | 1..2079 | 1..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ApepP-RA | 1..2066 | 14..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ApepP-RA | 1..2079 | 1..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ApepP-RA | 1..2066 | 14..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16908229..16910184 | 124..2079 | 100 | <- | Minus |
2L | 16910309..16910431 | 1..123 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16908229..16910184 | 124..2079 | 100 | <- | Minus |
2L | 16910309..16910431 | 1..123 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16908229..16910184 | 124..2079 | 100 | <- | Minus |
2L | 16910309..16910431 | 1..123 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16908229..16910184 | 124..2079 | 100 | <- | Minus |
arm_2L | 16910309..16910431 | 1..123 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16910309..16910431 | 1..123 | 100 | Minus | |
2L | 16908229..16910184 | 124..2079 | 100 | <- | Minus |
Translation from 150 to 1991
> LD20901.pep MKRSTTQILTRLRELMLRAQVGDSCGISAYIVPSDDAHQSEYQCQHDERR SFVSGFDGSAGTAVITTETALLWTDGRYYQQAEKQLDSNWVLMRDGLSAT PSIGAWLAKNLPKGSFVGVDPRLLSFRVWKPIETELSSAECQLVPIEGNL IDEVWGEDQPPQTSNKIITLKLEHSGVTIAKKWDVVRQQLKEKNADALVV SALDEIAWFLNLRGSDIDFNPVFFSYLIVTNDELLLFVDSGKLPTDFVQH QKENNVQISVLPYASIGIEISKIVSTRESKIWIAPTSSYYLTALIPKSRR IQEVTPICVLKAIKNDVEIAGFINSHIRDGVALCQYFAWLEDQVNKGAEV DEMSGADKLESFRSTKDKYMGLSFTTISASGPNGSVIHYHPKKETNRKIN DKEIYLCDSGAQYLDGTTDVTRTLHFGEPTEFQKEAYTRVLKGQLSFGST VFPAKVKGQVLDTLARKALWDVGLDYGHGTGHGVGHFLNVHEGPMGVGIR LMPDDPGLQANMFISNEPGFYQDGEFGIRVEDIVQIVPGQVAHNFSNRGA LTFKTITMCPKQTKMIKKELLSDAEVKLLNSYHQQVWDTLSPILSREGDE FTLSWLKKEVQPI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15114-PA | 613 | GF15114-PA | 2..613 | 3..613 | 2851 | 86.3 | Plus |
Dana\GF17113-PA | 705 | GF17113-PA | 45..660 | 1..613 | 849 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21760-PA | 613 | GG21760-PA | 1..613 | 1..613 | 3212 | 97.1 | Plus |
Dere\GG19138-PA | 702 | GG19138-PA | 52..660 | 9..613 | 834 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16927-PA | 612 | GH16927-PA | 1..612 | 1..613 | 2390 | 72 | Plus |
Dgri\GH18704-PA | 706 | GH18704-PA | 56..664 | 9..613 | 818 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ApepP-PB | 613 | CG6291-PB | 1..613 | 1..613 | 3199 | 100 | Plus |
ApepP-PA | 613 | CG6291-PA | 1..613 | 1..613 | 3199 | 100 | Plus |
CG6225-PB | 704 | CG6225-PB | 52..660 | 9..613 | 830 | 31.4 | Plus |
CG6225-PA | 704 | CG6225-PA | 52..660 | 9..613 | 830 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13683-PA | 610 | GI13683-PA | 2..610 | 3..613 | 2395 | 71.8 | Plus |
Dmoj\GI22851-PA | 713 | GI22851-PA | 58..666 | 9..613 | 801 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21958-PA | 598 | GL21958-PA | 1..598 | 16..613 | 2671 | 79.1 | Plus |
Dper\GL27147-PA | 699 | GL27147-PA | 52..660 | 9..613 | 835 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27324-PA | 612 | GA27324-PA | 2..612 | 3..613 | 2718 | 79.1 | Plus |
Dpse\GA19455-PA | 699 | GA19455-PA | 52..660 | 9..613 | 828 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17144-PA | 329 | GM17144-PA | 1..324 | 1..362 | 1572 | 84.3 | Plus |
Dsec\GM17145-PA | 244 | GM17145-PA | 1..244 | 370..613 | 1313 | 98.8 | Plus |
Dsec\GM24054-PA | 702 | GM24054-PA | 52..660 | 9..613 | 834 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21885-PA | 613 | GD21885-PA | 1..613 | 1..613 | 3245 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14022-PA | 610 | GJ14022-PA | 2..610 | 3..613 | 2409 | 73.2 | Plus |
Dvir\GJ14152-PA | 703 | GJ14152-PA | 52..660 | 9..613 | 825 | 31 | Plus |
Translation from 150 to 1991
> LD20901.hyp MKRSTTQILTRLRELMLRAQVGDSCGISAYIVPSDDAHQSEYQCQHDERR SFVSGFDGSAGTAVITTETALLWTDGRYYQQAEKQLDSNWVLMRDGLSAT PSIGAWLAKNLPKGSFVGVDPRLLSFRVWKPIETELSSAECQLVPIEGNL IDEVWGEDQPPQTSNKIITLKLEHSGVTIAKKWDVVRQQLKEKNADALVV SALDEIAWFLNLRGSDIDFNPVFFSYLIVTNDELLLFVDSGKLPTDFVQH QKENNVQISVLPYASIGIEISKIVSTRESKIWIAPTSSYYLTALIPKSRR IQEVTPICVLKAIKNDVEIAGFINSHIRDGVALCQYFAWLEDQVNKGAEV DEMSGADKLESFRSTKDKYMGLSFTTISASGPNGSVIHYHPKKETNRKIN DKEIYLCDSGAQYLDGTTDVTRTLHFGEPTEFQKEAYTRVLKGQLSFGST VFPAKVKGQVLDTLARKALWDVGLDYGHGTGHGVGHFLNVHEGPMGVGIR LMPDDPGLQANMFISNEPGFYQDGEFGIRVEDIVQIVPGQVAHNFSNRGA LTFKTITMCPKQTKMIKKELLSDAEVKLLNSYHQQVWDTLSPILSREGDE FTLSWLKKEVQPI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ApepP-PB | 613 | CG6291-PB | 1..613 | 1..613 | 3199 | 100 | Plus |
ApepP-PA | 613 | CG6291-PA | 1..613 | 1..613 | 3199 | 100 | Plus |
CG6225-PB | 704 | CG6225-PB | 52..660 | 9..613 | 830 | 31.4 | Plus |
CG6225-PA | 704 | CG6225-PA | 52..660 | 9..613 | 830 | 31.4 | Plus |