BDGP Sequence Production Resources |
Search the DGRC for LD21042
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 210 |
Well: | 42 |
Vector: | pBS SK- |
Associated Gene/Transcript | mr-RA |
Protein status: | LD21042.pep: gold |
Sequenced Size: | 2598 |
Gene | Date | Evidence |
---|---|---|
CG3060 | 2007-09-25 | DGC5 pick |
mr | 2008-04-29 | Release 5.5 accounting |
mr | 2008-04-29 | Picked prior to 5.5 |
mr | 2008-08-15 | Release 5.9 accounting |
mr | 2008-12-18 | 5.12 accounting |
2598 bp assembled on 2007-12-04
GenBank Submission: BT031326
> LD21042.complete TTTCAAGCAATGTTTTGCACTGTTTAAAATAATTACACACAAGCGATGTG CGACTTTGACGCTTTGTGGGCGGATGTACTGAGAATCTTTCCGGTTTTGG GTGGAGCGAACGCTGTATCCAATGATCCGGTTGAGGAGAATGTATTCCAA AATGTTCGCCAGCACCTGATGGTGTTGGGCAGCATAGACACCTTCGCGGC GGTTGTGGACCTGGAAATCCAGTCGACTATTCGGAATGTCCTGGTGCCCA AGTTCTGGAAGCACATCCACGACGGCTTGGTCTCGTCTAAATTGCAGGGC TGGATTAACGACCAAGCTCTGGCCATAGAAGCACTGCCCGATAAGAACGG ACTGTTCACCCAGTTCATCGACGCCATCAATGAGCTGCATGACAGCTTTC AGAGCCTGATGCAGGTGAAGCCCAGGCTGATCCAGCTAGTTGGAGCTGAG ACAAAGCCCACCGCAAAGACGGTGAAGCTCATGCAGGAGGAAGGCATTAA GAACTGCTTAAGGGACTGCTTGCTGGCTCAACTGCCACCCAATTTCAGTG TGGTCGTTGGGGCCTTCTACTGGGTGCACTTTAAGCTCTTCACCAAGGCC TCAAATCTCGCATTGACCACAGTTGACTCTGATGTTTTCGATGAGCTCCT CTGCGTTGGCTGCAACTTCGAAGCAGAGCAATGCTGCTGCCAAAGGCTGA CGGATATGGTTAACAAGACAAACATGAAGCTCTTCGAGATGAACCTCATT GACCGTCTAACTGGGAGTGCTTTAACCGCTCTCATCAAGCTTAAAATCAA GGAGCACATCAGCGATACATGCATGGGAATCTTCGACAGAAGTCATCTTA AGCAACTGGAAACTTGGCTATCGGATGTCATCATGTCCTGGCTCACAAAC ATATTCACGGAATGGAAGTCTAAGGATAGCATAAGCGATATCGAAGTTCC CGAGTCTGTAAAATCCTTCAAAGTCAAACTGACTTACTTTATGTACGAAA CGTTTGCCCAAAGCGTTATTGGTCAGTTCTTCAGCATTATAATTGACTAT CCCGATTCCATTCCGGCTATAGATGACTTAAAGATTTGCATGGAGAAAAT AGATATGCGAGTCTACCTCACTGAATCCCTTAGGAACTCGCTAGAGGCAA GGATTCTGCATCCTGGAGTCAACACCATGGACATATTAACGGGTTACGTG GCAGCCATCAAAGCTATTCGCCATCTGGATAGTACCGGAGTCATCTTAGA GATGGTAACTGCTCCAATCAAAGATTACCTGCGGAAACGAAACGACACAG TGCGACGCGTAGTCACTGGGTTGACTGAAGAGGGGCCCACGGACTTATCC GAGGAACTCGCCAAGGGAGAAACAATTAAGGAATGCAAGGACTCGGGTAC CGATGAGTTCAGCAACTGGGAAAATTGGCAACCCGATCCGTTTGGTATAG ATGCCAGCATTATGCAGTACAACAGCTCGCGGAAGATGAGATCGGCCGAC ATTATATCGATGGTTGTAGACATATACGGCAGTAAGGAGTTGTTTATGAC AGAGTATCGCAATCTAATGGCGGACAGACTGCTGGCCCAGTTAGATTTTA ATTCCGAAAAAGAAATTCGAAATCTGGAACTGCTGAAAATCCGCTTTGGC GAATCGCTGCTGCACAGCTGCGAGGTGATGTTGAAAGACGTAACCGACTC CAAGCGAATTAACGCGCACATCCACAGCGATGGCGACCGAACTGAAAATC AGTTGTTCGACATCTCCTCGCTGATTGTTTCTGCTCAGTTTTGGCCGTCC TTCAATAAAGAAAGCCTCCAACTTCCTGAGGAGATTGAGAATGAGTTCAA GAAGTACACCAAGGCCTACGAGGCATACAAGGGCAACCGTACGCTCAACT GGCGTACAGTGACTGGCCGTGTAAATATTGAAATCGAGATCGGTGACCGG ACCATGGAAATGGTTGTGAGCCCCATTTTGGCGGTTATTATATACCACTT TCAAACTAAGAATGAATGGACTATCGAGGATCTTAGTTCCATTACGAAAG TTCCAGCGTCTGCACTGCGGCGTCGTCTGAGTTTTTGGCAAAACCACGGA TTGATCTCGGAAACGACACCCGGAATATTCACGCTGCTGGAAAAGGAATC GGAGAAGTCTCAGTACGAGGACATGAGTCTGGCAGAAGCTGACGAAGAGG ATTTGGAATCCGCAATGGCTTCTGCCAGCGATCAAAGGGAAGAAGAACTC CAAGTTTTTTGGTCCTATATTGTTGGAATGCTCACGAATCTTGACTCCAT GCCAATTGACCGAATCCACCAGATGCTGAAGCTGTTCGCCTCCCACAGCG GCGGAGTGGAGTTTACTCAGGATGAGCTGAAACACTTTCTCCAGCGAAAA GTCAGGGAGCACAAGCTAATATTCTCGGGTGGAGTTTACCAATTGGCCAA ATAAGTTTCGGAGATCCAAAACCAAGTTGCAAACGACTGAAGGAATCATG AAATAAATAATGAATTAACGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19859840..19860549 | 1045..1754 | 3460 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 19858713..19859230 | 108..625 | 2575 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 19861220..19861488 | 2254..2522 | 1315 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 19860594..19860857 | 1748..2011 | 1290 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 19860922..19861165 | 2012..2255 | 1220 | 100 | Plus |
chr2R | 21145070 | chr2R | 19859286..19859525 | 625..864 | 1155 | 98.8 | Plus |
chr2R | 21145070 | chr2R | 19859601..19859781 | 865..1045 | 875 | 98.9 | Plus |
chr2R | 21145070 | chr2R | 19858545..19858652 | 1..108 | 540 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23973759..23974468 | 1045..1754 | 3520 | 99.7 | Plus |
2R | 25286936 | 2R | 23972632..23973149 | 108..625 | 2590 | 100 | Plus |
2R | 25286936 | 2R | 23975140..23975409 | 2254..2523 | 1350 | 100 | Plus |
2R | 25286936 | 2R | 23974513..23974776 | 1748..2011 | 1320 | 100 | Plus |
2R | 25286936 | 2R | 23974842..23975085 | 2012..2255 | 1220 | 100 | Plus |
2R | 25286936 | 2R | 23973205..23973444 | 625..864 | 1200 | 100 | Plus |
2R | 25286936 | 2R | 23973520..23973700 | 865..1045 | 890 | 99.4 | Plus |
2R | 25286936 | 2R | 23972464..23972571 | 1..108 | 540 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23974958..23975667 | 1045..1754 | 3520 | 99.7 | Plus |
2R | 25260384 | 2R | 23973831..23974348 | 108..625 | 2590 | 100 | Plus |
2R | 25260384 | 2R | 23976339..23976608 | 2254..2523 | 1350 | 100 | Plus |
2R | 25260384 | 2R | 23975712..23975975 | 1748..2011 | 1320 | 100 | Plus |
2R | 25260384 | 2R | 23976041..23976284 | 2012..2255 | 1220 | 100 | Plus |
2R | 25260384 | 2R | 23974404..23974643 | 625..864 | 1200 | 100 | Plus |
2R | 25260384 | 2R | 23974719..23974899 | 865..1045 | 890 | 99.4 | Plus |
2R | 25260384 | 2R | 23973663..23973770 | 1..108 | 540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19858545..19858652 | 1..108 | 100 | -> | Plus |
chr2R | 19858714..19859230 | 109..625 | 99 | -> | Plus |
chr2R | 19859287..19859525 | 626..864 | 98 | -> | Plus |
chr2R | 19859601..19859781 | 865..1045 | 98 | -> | Plus |
chr2R | 19859841..19860542 | 1046..1747 | 99 | -> | Plus |
chr2R | 19860594..19860857 | 1748..2011 | 99 | -> | Plus |
chr2R | 19860922..19861163 | 2012..2253 | 100 | -> | Plus |
chr2R | 19861220..19861488 | 2254..2522 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mr-RA | 1..2409 | 46..2454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mr-RA | 1..2409 | 46..2454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mr-RA | 1..2409 | 46..2454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mr-RA | 1..2409 | 46..2454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mr-RA | 1..2409 | 46..2454 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mr-RA | 32..2553 | 1..2522 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mr-RA | 32..2553 | 1..2522 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mr-RA | 34..2555 | 1..2522 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mr-RA | 32..2553 | 1..2522 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mr-RA | 34..2555 | 1..2522 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23972464..23972571 | 1..108 | 100 | -> | Plus |
2R | 23972633..23973149 | 109..625 | 100 | -> | Plus |
2R | 23973206..23973444 | 626..864 | 100 | -> | Plus |
2R | 23973520..23973700 | 865..1045 | 99 | -> | Plus |
2R | 23973760..23974461 | 1046..1747 | 100 | -> | Plus |
2R | 23974513..23974776 | 1748..2011 | 100 | -> | Plus |
2R | 23974842..23975083 | 2012..2253 | 100 | -> | Plus |
2R | 23975140..23975408 | 2254..2522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23972464..23972571 | 1..108 | 100 | -> | Plus |
2R | 23972633..23973149 | 109..625 | 100 | -> | Plus |
2R | 23973206..23973444 | 626..864 | 100 | -> | Plus |
2R | 23973520..23973700 | 865..1045 | 99 | -> | Plus |
2R | 23973760..23974461 | 1046..1747 | 100 | -> | Plus |
2R | 23974513..23974776 | 1748..2011 | 100 | -> | Plus |
2R | 23974842..23975083 | 2012..2253 | 100 | -> | Plus |
2R | 23975140..23975408 | 2254..2522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23972464..23972571 | 1..108 | 100 | -> | Plus |
2R | 23972633..23973149 | 109..625 | 100 | -> | Plus |
2R | 23973206..23973444 | 626..864 | 100 | -> | Plus |
2R | 23973520..23973700 | 865..1045 | 99 | -> | Plus |
2R | 23973760..23974461 | 1046..1747 | 100 | -> | Plus |
2R | 23974513..23974776 | 1748..2011 | 100 | -> | Plus |
2R | 23974842..23975083 | 2012..2253 | 100 | -> | Plus |
2R | 23975140..23975408 | 2254..2522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19859987..19860094 | 1..108 | 100 | -> | Plus |
arm_2R | 19860156..19860672 | 109..625 | 100 | -> | Plus |
arm_2R | 19860729..19860967 | 626..864 | 100 | -> | Plus |
arm_2R | 19861043..19861223 | 865..1045 | 99 | -> | Plus |
arm_2R | 19861283..19861984 | 1046..1747 | 100 | -> | Plus |
arm_2R | 19862036..19862299 | 1748..2011 | 100 | -> | Plus |
arm_2R | 19862365..19862606 | 2012..2253 | 100 | -> | Plus |
arm_2R | 19862663..19862931 | 2254..2522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23973850..23974366 | 109..625 | 100 | -> | Plus |
2R | 23974423..23974661 | 626..864 | 100 | -> | Plus |
2R | 23974737..23974917 | 865..1045 | 99 | -> | Plus |
2R | 23974977..23975678 | 1046..1747 | 100 | -> | Plus |
2R | 23975730..23975993 | 1748..2011 | 100 | -> | Plus |
2R | 23976059..23976300 | 2012..2253 | 100 | -> | Plus |
2R | 23976357..23976625 | 2254..2522 | 100 | Plus | |
2R | 23973681..23973788 | 1..108 | 100 | -> | Plus |
Translation from 45 to 2453
> LD21042.pep MCDFDALWADVLRIFPVLGGANAVSNDPVEENVFQNVRQHLMVLGSIDTF AAVVDLEIQSTIRNVLVPKFWKHIHDGLVSSKLQGWINDQALAIEALPDK NGLFTQFIDAINELHDSFQSLMQVKPRLIQLVGAETKPTAKTVKLMQEEG IKNCLRDCLLAQLPPNFSVVVGAFYWVHFKLFTKASNLALTTVDSDVFDE LLCVGCNFEAEQCCCQRLTDMVNKTNMKLFEMNLIDRLTGSALTALIKLK IKEHISDTCMGIFDRSHLKQLETWLSDVIMSWLTNIFTEWKSKDSISDIE VPESVKSFKVKLTYFMYETFAQSVIGQFFSIIIDYPDSIPAIDDLKICME KIDMRVYLTESLRNSLEARILHPGVNTMDILTGYVAAIKAIRHLDSTGVI LEMVTAPIKDYLRKRNDTVRRVVTGLTEEGPTDLSEELAKGETIKECKDS GTDEFSNWENWQPDPFGIDASIMQYNSSRKMRSADIISMVVDIYGSKELF MTEYRNLMADRLLAQLDFNSEKEIRNLELLKIRFGESLLHSCEVMLKDVT DSKRINAHIHSDGDRTENQLFDISSLIVSAQFWPSFNKESLQLPEEIENE FKKYTKAYEAYKGNRTLNWRTVTGRVNIEIEIGDRTMEMVVSPILAVIIY HFQTKNEWTIEDLSSITKVPASALRRRLSFWQNHGLISETTPGIFTLLEK ESEKSQYEDMSLAEADEEDLESAMASASDQREEELQVFWSYIVGMLTNLD SMPIDRIHQMLKLFASHSGGVEFTQDELKHFLQRKVREHKLIFSGGVYQL AK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12886-PA | 803 | GF12886-PA | 1..803 | 1..802 | 3801 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22916-PA | 802 | GG22916-PA | 1..802 | 1..802 | 4092 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20172-PA | 792 | GH20172-PA | 1..792 | 1..802 | 3183 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mr-PA | 802 | CG3060-PA | 1..802 | 1..802 | 4132 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20702-PA | 793 | GI20702-PA | 1..793 | 1..802 | 3190 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11645-PA | 802 | GL11645-PA | 1..802 | 1..802 | 3682 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15898-PA | 802 | GA15898-PA | 1..802 | 1..802 | 3681 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16075-PA | 802 | GM16075-PA | 1..802 | 1..802 | 4233 | 98 | Plus |
Dsec\GM11953-PA | 258 | GM11953-PA | 1..258 | 545..802 | 1347 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11818-PA | 802 | GD11818-PA | 1..802 | 1..802 | 4247 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21890-PA | 789 | GJ21890-PA | 1..789 | 1..802 | 3156 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15727-PA | 808 | GK15727-PA | 1..808 | 1..802 | 3469 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14353-PA | 802 | GE14353-PA | 1..802 | 1..802 | 4124 | 95.5 | Plus |
Translation from 45 to 2453
> LD21042.hyp MCDFDALWADVLRIFPVLGGANAVSNDPVEENVFQNVRQHLMVLGSIDTF AAVVDLEIQSTIRNVLVPKFWKHIHDGLVSSKLQGWINDQALAIEALPDK NGLFTQFIDAINELHDSFQSLMQVKPRLIQLVGAETKPTAKTVKLMQEEG IKNCLRDCLLAQLPPNFSVVVGAFYWVHFKLFTKASNLALTTVDSDVFDE LLCVGCNFEAEQCCCQRLTDMVNKTNMKLFEMNLIDRLTGSALTALIKLK IKEHISDTCMGIFDRSHLKQLETWLSDVIMSWLTNIFTEWKSKDSISDIE VPESVKSFKVKLTYFMYETFAQSVIGQFFSIIIDYPDSIPAIDDLKICME KIDMRVYLTESLRNSLEARILHPGVNTMDILTGYVAAIKAIRHLDSTGVI LEMVTAPIKDYLRKRNDTVRRVVTGLTEEGPTDLSEELAKGETIKECKDS GTDEFSNWENWQPDPFGIDASIMQYNSSRKMRSADIISMVVDIYGSKELF MTEYRNLMADRLLAQLDFNSEKEIRNLELLKIRFGESLLHSCEVMLKDVT DSKRINAHIHSDGDRTENQLFDISSLIVSAQFWPSFNKESLQLPEEIENE FKKYTKAYEAYKGNRTLNWRTVTGRVNIEIEIGDRTMEMVVSPILAVIIY HFQTKNEWTIEDLSSITKVPASALRRRLSFWQNHGLISETTPGIFTLLEK ESEKSQYEDMSLAEADEEDLESAMASASDQREEELQVFWSYIVGMLTNLD SMPIDRIHQMLKLFASHSGGVEFTQDELKHFLQRKVREHKLIFSGGVYQL AK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mr-PA | 802 | CG3060-PA | 1..802 | 1..802 | 4132 | 100 | Plus |