BDGP Sequence Production Resources |
Search the DGRC for LD21091
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 210 |
Well: | 91 |
Vector: | pBS SK- |
Associated Gene/Transcript | Abp1-RA |
Protein status: | LD21091.pep: gold |
Sequenced Size: | 2528 |
Gene | Date | Evidence |
---|---|---|
CG10083 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10083 | 2004-12-02 | Blastp of sequenced clone |
CG10083 | 2008-04-29 | Release 5.5 accounting |
CG10083 | 2008-08-15 | Release 5.9 accounting |
CG10083 | 2008-12-18 | 5.12 accounting |
2528 bp (2528 high quality bases) assembled on 2004-12-02
GenBank Submission: BT021389
> LD21091.complete CCCAGCTCTAGTTTGTTGTTGCAAAAAAAGTGTGTGGGTCGCCGCCAGCG ATCGAATATTTTAAAATTCCAATCAAATTGGTTAATTGGGGAGTTGCAAT TGCTTGAGCGTTAAGTTAAACCTATTTCTGCACGCATAACTCGAAGGATT AAGGTGGAAAAGTGGAATTTGGAAAGCCGCTGGAAATTCGCACATACTGG AAAATCAATCACCCACTATCCCATTGTTCTGCTTGTGTTTGTGTACGTCT GTGTGCCTTTGTGAGGCGGCTGCACTTAATTAAAATTTAAGACAAGACAA CCCAAGCAAATTTGGAGTCTTCGCGAGGCGTTGGCTTTCACTTGACGAAG AGGGCACCCCGATAAGGCGACCCAGTGAAAGCTGGCCAAGATCTCGCTGC TCAAGGTCGTTGTCAGTCTGGAATTATGGCCGTCAGCTTCGAGAAGAATC GGGCGCAAATAGTGGCCGCCTGGAAGGATGTGCTGGACGATAAGAGCGAC ACGAACTGGTCCCTCTTTGGCTACGAGGGTCAGACCAACGAGCTGAAGGT GGTGGCCACCGGCGATGGCGGCGTGGATGAGCTAAACGAAGACCTAAATA GCGGCAAGATTATGTACGCCTTCGTCCGAATCGAAGACCCCAAAACGGGC CTCAACAAGTACTTGCTCATCAACTGGCAGGGCGAGGGCGCACCTGTTCT ACGCAAGGGTACCTGCGCCAACCACATACGTGATGTGAGTAATTTGCTGT CCGGCGCTCACCTTACCATCAATGCCCGGAACGAGGACGATATTGACTTG GATCGGCTTCTCAAGAAGCTGAGCACCGTGAGCTCAGCCTACAGCTTTAA GGAACCTCGAGGCGCCATGGAGGAGCAGAAGGCGCCGGTGGGAACCAACT ATACTCGGGTCATTCCCACCAAGGAGTTAAACGCCAGCGTTATGCAGGAC TTCTGGAAAAAGGAGGAGGCCGAGGAGAAATTGCGACAGGAGGCAGAGAA GGAATCCAAGCGGCTTGAGCTTCAAAAGTTGGAGCAGGAGCAACGTAGTC GCGAGGAGAAGGAGCACAAGGAGCGGGAGAAGTTGGTCATAAGCACCACC AAGCTCCAGCCGGCCCACGTACCCATCAAAACGTCACCGCAACCTTTGAG CCCTGAGAAAACTGCACCAGGATTTGCCAACAATCTGACCGATGCGGAGC GCATGCGTCAGGCGAGGAACCAGGAGGCCCGCGAATTGATTGGCTCTCGT GTGGGTGCTGCCAAGGCCATGTTTACAAAGCACACGAGCGAGGGACAACT TCAGTCTAAACTAAATACGCAACCGCCGGCCAAACCAGCTCGCAACTCGA TTGCCCAGCGCATCAACGTTTTCAACCAAAACCAGCCTCAAGATGCACCT GTGCCTTCACCACCACGCGCTGCGTCCCCTGCCAAACCGTTGCCTGTAGA GGCTCCCGAACCAGTAGTCCCCGCTCCAGCTATAGCTCCTGCTGCTCCCG TGGCTGCCGAGGTTGTTTCCACAATAGCGGAGGTGGAGGAGTCGCAACCG GTAGACGATTTGCCACTGGCCCATGAGAGCGAACAGTTCTCGACTATCAA GCGATCACCCCATAGTAAATCGAACTCGCTGCAGTCTCAGTCGCCCGACG AGACCACCTCTTCCAATGAAACAGACACCGCTGTTTCCCAGGAACAGGAA GAGGAGGTCCGCACCAAGGTGTCAGTCACCGTGCAGCAGTCGCAATCGGT CAAGTCGAGCGGCATGAGCACACTCGAAAGGAATGCATTAACGGATTTGG TAAACGAGGACGATTTTATCTGCCAGGAGACCTTAGGCGATCTGGGACAA CGGGCACGAGCTCTATACGATTACCAGGCAGCCGACGAGACAGAGATCAC TTTCGATCCAGGCGATGTCATTACGCATATCGATCAAATCGACGAGGGAT GGTGGCAGGGACTGGGCCCTGATGGAACCTATGGACTGTTTCCGGCAAAC TATGTCGAGATCATCAACTAGGGAAACCCAAGTGCCAAGCAGCTGGGACG CCCTTTTGCTAAATATCTACACCAATGCAGCTAGCAACTATATTTTGGAT CCGGACTATAGCTACTTAAACACTTTACCCCATAATCTTGAACAATAATG CGATACACCTAGAAGAGATTCAACGATGACTAAATGCGACTATAAGATTT TTATCGTACATCACGCGTCTGTTTTTTATCTACATACATATTATTATATA ACGTATAATCCATGCCACATATGCAACCCTATCATACGTTGTTCCCATTT GTATACATATTATATCATTGTTTGGCCTCGATTGCCGAAGCCGTGTTGCG TCCTTTTAAAATGTTCTTAGGATACATACAAAGTAACCACTTAGTCAGTA TTTAAGGCCCGCTCCATTCCCGATCCAGGGTTCTTTTGTATATGTATTAT TGATCGAGATTTATAACCTTTTCGATAATAAACTTTGATAATTGTGCAAC CGAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 13473748..13474461 | 2502..1789 | 3540 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 13475817..13476497 | 681..1 | 3315 | 99.1 | Minus |
chr3L | 24539361 | chr3L | 13474525..13475003 | 1788..1310 | 2380 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 13475302..13475758 | 1134..678 | 2270 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 13475066..13475242 | 1309..1133 | 885 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 13483531..13484246 | 2504..1789 | 3580 | 100 | Minus |
3L | 28110227 | 3L | 13485602..13486282 | 681..1 | 3405 | 100 | Minus |
3L | 28110227 | 3L | 13484310..13484788 | 1788..1310 | 2395 | 100 | Minus |
3L | 28110227 | 3L | 13485087..13485543 | 1134..678 | 2285 | 100 | Minus |
3L | 28110227 | 3L | 13484851..13485027 | 1309..1133 | 885 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 13476631..13477346 | 2504..1789 | 3580 | 100 | Minus |
3L | 28103327 | 3L | 13478702..13479382 | 681..1 | 3405 | 100 | Minus |
3L | 28103327 | 3L | 13477410..13477888 | 1788..1310 | 2395 | 100 | Minus |
3L | 28103327 | 3L | 13478187..13478643 | 1134..678 | 2285 | 100 | Minus |
3L | 28103327 | 3L | 13477951..13478127 | 1309..1133 | 885 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 13473748..13474461 | 1789..2502 | 99 | <- | Minus |
chr3L | 13474525..13475003 | 1310..1788 | 99 | <- | Minus |
chr3L | 13475066..13475242 | 1133..1309 | 100 | <- | Minus |
chr3L | 13475304..13475755 | 681..1132 | 99 | <- | Minus |
chr3L | 13475818..13476497 | 1..680 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10083-RA | 1..1596 | 426..2021 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10083-RA | 1..1596 | 426..2021 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abp1-RA | 1..1596 | 426..2021 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10083-RA | 1..1596 | 426..2021 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abp1-RA | 1..1596 | 426..2021 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10083-RA | 17..2518 | 1..2502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10083-RA | 17..2518 | 1..2502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abp1-RA | 1..2500 | 3..2502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10083-RA | 17..2518 | 1..2502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Abp1-RA | 1..2500 | 3..2502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13483533..13484246 | 1789..2502 | 100 | <- | Minus |
3L | 13484310..13484788 | 1310..1788 | 100 | <- | Minus |
3L | 13484851..13485027 | 1133..1309 | 100 | <- | Minus |
3L | 13485089..13485540 | 681..1132 | 100 | <- | Minus |
3L | 13485603..13486282 | 1..680 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13483533..13484246 | 1789..2502 | 100 | <- | Minus |
3L | 13484310..13484788 | 1310..1788 | 100 | <- | Minus |
3L | 13484851..13485027 | 1133..1309 | 100 | <- | Minus |
3L | 13485089..13485540 | 681..1132 | 100 | <- | Minus |
3L | 13485603..13486282 | 1..680 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13483533..13484246 | 1789..2502 | 100 | <- | Minus |
3L | 13484310..13484788 | 1310..1788 | 100 | <- | Minus |
3L | 13484851..13485027 | 1133..1309 | 100 | <- | Minus |
3L | 13485089..13485540 | 681..1132 | 100 | <- | Minus |
3L | 13485603..13486282 | 1..680 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 13476633..13477346 | 1789..2502 | 100 | <- | Minus |
arm_3L | 13477410..13477888 | 1310..1788 | 100 | <- | Minus |
arm_3L | 13477951..13478127 | 1133..1309 | 100 | <- | Minus |
arm_3L | 13478189..13478640 | 681..1132 | 100 | <- | Minus |
arm_3L | 13478703..13479382 | 1..680 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13476633..13477346 | 1789..2502 | 100 | <- | Minus |
3L | 13477410..13477888 | 1310..1788 | 100 | <- | Minus |
3L | 13477951..13478127 | 1133..1309 | 100 | <- | Minus |
3L | 13478189..13478640 | 681..1132 | 100 | <- | Minus |
3L | 13478703..13479382 | 1..680 | 100 | Minus |
Translation from 425 to 2020
> LD21091.pep MAVSFEKNRAQIVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGV DELNEDLNSGKIMYAFVRIEDPKTGLNKYLLINWQGEGAPVLRKGTCANH IRDVSNLLSGAHLTINARNEDDIDLDRLLKKLSTVSSAYSFKEPRGAMEE QKAPVGTNYTRVIPTKELNASVMQDFWKKEEAEEKLRQEAEKESKRLELQ KLEQEQRSREEKEHKEREKLVISTTKLQPAHVPIKTSPQPLSPEKTAPGF ANNLTDAERMRQARNQEARELIGSRVGAAKAMFTKHTSEGQLQSKLNTQP PAKPARNSIAQRINVFNQNQPQDAPVPSPPRAASPAKPLPVEAPEPVVPA PAIAPAAPVAAEVVSTIAEVEESQPVDDLPLAHESEQFSTIKRSPHSKSN SLQSQSPDETTSSNETDTAVSQEQEEEVRTKVSVTVQQSQSVKSSGMSTL ERNALTDLVNEDDFICQETLGDLGQRARALYDYQAADETEITFDPGDVIT HIDQIDEGWWQGLGPDGTYGLFPANYVEIIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10969-PA | 519 | GF10969-PA | 1..519 | 1..531 | 2339 | 87 | Plus |
Dana\GF18522-PA | 548 | GF18522-PA | 485..544 | 470..530 | 231 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13760-PA | 533 | GG13760-PA | 1..533 | 1..531 | 2761 | 97.7 | Plus |
Dere\GG14937-PA | 555 | GG14937-PA | 266..552 | 258..531 | 239 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16682-PA | 532 | GH16682-PA | 1..532 | 1..531 | 2273 | 83.2 | Plus |
Dgri\GH24032-PA | 212 | GH24032-PA | 43..212 | 362..531 | 809 | 87.6 | Plus |
Dgri\GH23174-PA | 557 | GH23174-PA | 492..554 | 468..531 | 233 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Abp1-PA | 531 | CG10083-PA | 1..531 | 1..531 | 2719 | 100 | Plus |
Cortactin-PD | 559 | CG3637-PD | 248..555 | 184..530 | 293 | 29.1 | Plus |
Cortactin-PC | 559 | CG3637-PC | 248..555 | 184..530 | 293 | 29.1 | Plus |
Cortactin-PB | 559 | CG3637-PB | 248..555 | 184..530 | 293 | 29.1 | Plus |
Cortactin-PA | 559 | CG3637-PA | 248..555 | 184..530 | 293 | 29.1 | Plus |
Synd-PD | 495 | CG33094-PD | 320..493 | 355..528 | 159 | 27.8 | Plus |
Synd-PC | 495 | CG33094-PC | 320..493 | 355..528 | 159 | 27.8 | Plus |
Synd-PB | 494 | CG33094-PB | 320..492 | 355..528 | 158 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11368-PA | 526 | GI11368-PA | 1..526 | 1..531 | 2338 | 83.5 | Plus |
Dmoj\GI10305-PA | 553 | GI10305-PA | 265..550 | 258..531 | 269 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20789-PA | 531 | GL20789-PA | 1..531 | 1..531 | 2404 | 90.4 | Plus |
Dper\GL12684-PA | 563 | GL12684-PA | 498..559 | 468..530 | 223 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10060-PA | 531 | GA10060-PA | 1..531 | 1..531 | 2404 | 90.6 | Plus |
Dpse\GA17577-PA | 563 | GA17577-PA | 498..559 | 468..530 | 223 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24586-PA | 531 | GM24586-PA | 1..531 | 1..531 | 2802 | 99.1 | Plus |
Dsec\GM15108-PA | 549 | GM15108-PA | 266..546 | 258..531 | 245 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12654-PA | 531 | GD12654-PA | 1..531 | 1..531 | 2811 | 99.4 | Plus |
Dsim\GD20012-PA | 549 | GD20012-PA | 266..546 | 258..531 | 245 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11623-PA | 524 | GJ11623-PA | 1..524 | 1..531 | 2312 | 85.6 | Plus |
Dvir\GJ10159-PA | 549 | GJ10159-PA | 265..546 | 258..531 | 251 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17105-PA | 534 | GK17105-PA | 1..534 | 1..531 | 2394 | 86.8 | Plus |
Dwil\GK13516-PA | 557 | GK13516-PA | 266..557 | 258..531 | 244 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20057-PA | 531 | GE20057-PA | 1..531 | 1..531 | 2776 | 97.9 | Plus |
Translation from 425 to 2020
> LD21091.hyp MAVSFEKNRAQIVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGV DELNEDLNSGKIMYAFVRIEDPKTGLNKYLLINWQGEGAPVLRKGTCANH IRDVSNLLSGAHLTINARNEDDIDLDRLLKKLSTVSSAYSFKEPRGAMEE QKAPVGTNYTRVIPTKELNASVMQDFWKKEEAEEKLRQEAEKESKRLELQ KLEQEQRSREEKEHKEREKLVISTTKLQPAHVPIKTSPQPLSPEKTAPGF ANNLTDAERMRQARNQEARELIGSRVGAAKAMFTKHTSEGQLQSKLNTQP PAKPARNSIAQRINVFNQNQPQDAPVPSPPRAASPAKPLPVEAPEPVVPA PAIAPAAPVAAEVVSTIAEVEESQPVDDLPLAHESEQFSTIKRSPHSKSN SLQSQSPDETTSSNETDTAVSQEQEEEVRTKVSVTVQQSQSVKSSGMSTL ERNALTDLVNEDDFICQETLGDLGQRARALYDYQAADETEITFDPGDVIT HIDQIDEGWWQGLGPDGTYGLFPANYVEIIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Abp1-PA | 531 | CG10083-PA | 1..531 | 1..531 | 2719 | 100 | Plus |
Cortactin-PD | 559 | CG3637-PD | 248..555 | 184..530 | 293 | 29.1 | Plus |
Cortactin-PC | 559 | CG3637-PC | 248..555 | 184..530 | 293 | 29.1 | Plus |
Cortactin-PB | 559 | CG3637-PB | 248..555 | 184..530 | 293 | 29.1 | Plus |
Cortactin-PA | 559 | CG3637-PA | 248..555 | 184..530 | 293 | 29.1 | Plus |