BDGP Sequence Production Resources |
Search the DGRC for LD21116
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 211 |
Well: | 16 |
Vector: | pOT2 |
Associated Gene/Transcript | Aats-tyr-RA |
Protein status: | LD21116.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1785 |
Gene | Date | Evidence |
---|---|---|
CG4561 | 2001-01-01 | Release 2 assignment |
CG4561 | 2001-07-04 | Blastp of sequenced clone |
CG4561 | 2003-01-01 | Sim4 clustering to Release 3 |
Aats-tyr | 2008-04-29 | Release 5.5 accounting |
Aats-tyr | 2008-08-15 | Release 5.9 accounting |
Aats-tyr | 2008-12-18 | 5.12 accounting |
1785 bp (1785 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051662
> LD21116.complete ACTTTTTGTGATTTCGCAGCGCACGCGAAAATCTGATAAATTCCCTAAAA AAATGGTCGGAATAACGCCCGCAGAGAAGAAAGCGCTGATAACGCGCAAT CTGCAGGAGACGCTCGGCGATGACAAGCTGACCAAGATCCTGGCGGAGCG CGATCTAAAGATCTACTGGGGAACGGCGACGACGGGCAAGCCACATGTCG CCTATTTCGTGCCCATGTCGAAGATTGCCGATTTCCTGAAGGCAGGATGC GAAGTGACCATCCTGTTCGCCGATCTCCACGCCTATCTGGACAACATGAA GGCACCGTGGTCTCTCCTGGAGCTGCGAACCAAGTACTACGAACAGGTCA TCAAGGCCATGTTGAGCTCCATCGGCGTTCCGCTGGAGAAACTGAAGTTC GTCAAGGGCAGCGACTATCAGCTGTCCAAGGAGTACACCCTGGATGTATA CAAGCTCAGCTCCGTGGTCACGCAACACGATGCCAAGAAGGCGGGCGCAG AGGTGGTCAAACAGGTGGAGTACCCACTGCTCTCCGGTTTGCTTTATCCT GGTCTGCAGGCTCTGGACGAGGAGTACCTCAAGGTGGACGCACAATTCGG TGGCGTGGATCAGCGCAAGATCTTTACCTTCTCAGAGAAGTATCTGCCGC AGTTGGGCTACGAAAAGCGCATTCACTTCATGAATCCCATGGTTCCCGGC TTGGCTGGTGGCAAGATGTCCTCTTCCGAGGAGGACTCAAAGATCGATCT TCTGGACTCCCCGGCCAACGTGAAGAAGAAGCTGAAGAAGGCTTTCTGTG AGCCGGGAAACATTGCCGACAACGGCCTGCTGTCCTTCGTGAAGCACGTC CTGTTCTCGCTGTTCAAGGAAGGCGAAGGCTTCGAGGTTAACCGCGAGGC GGAGCATGGCGGCGATGTTACCTTCCTGAAATACGAGGATCTGGAGAAGT ACTACGCGGAGGACAAACTGCACCCGGGTGACCTGAAGGCCACCGTGGAG AAGTACATCAACCGACTGCTAGATCCCATTCGAAAGGCCTTTGAAAACCC AGAACTGCAAAAACTGAGTGCTGCTGCTTATCCACCGCCTGCCAAGGTGA AGGCAGGAGCTGCTCCCGCTGCTGGAGCTGACGAAGATGCACCCCATCGC CTGGATATCCGCGTGGGCAAGGTCGTCGAGGTGGCCCGTCATCCAGATGC CGATACTCTATATGTGCTGAAGATAGACTTGGCTGAGGCGCAACCCAGAA CGATTATTAGTGGCCTGGTGAAGTTTGTCACCGAGGAGGAGCTGAACCAG CGATTGGTGGCGGTTCTTTGCAACCTGAAGCCGTCCAAGATGCGCGGCAT CTTGTCCGAGGGCATGGTTCTGTGCACCTCCAACGCTGACCACACGGTGG TGGAGCCTATTGTGCTGCCAGCCACTGCTACTGCTGGCAGTCGCCTCTCC TTCGAGGGATTCAGTGGCACGCCCGATGAGCAGCTTAATCCCAAGAAGAA GGTGTGGGAGAAACTCTCCGCCGACTTCAAGACGAACAGCGATGGACTGG CCGTGTGGAAGGACAACTTCCTGCTGACGCCCGAGGGCGAAAAGCTTTCC AGCAAGCTGGCCAACTGCTCCATTAAATAAAACTTTCAACGCCAACCTAC CTGAGCCGTGTAATACTTACAACTAAGCCGAATGTTCACAAAACAGAAAT TGCTGCTAATTTATTGATTCCTCTTCGTAAAGAAAATGCATTTTTTAATA AAGCGCTCAAAAATAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Aats-tyr-RA | 1935 | Aats-tyr-RA | 158..1923 | 1..1766 | 8830 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16408389..16409080 | 692..1 | 3400 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 16407134..16407521 | 1764..1377 | 1925 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 16407960..16408327 | 1059..692 | 1840 | 100 | Minus |
chr3L | 24539361 | chr3L | 16407574..16407897 | 1383..1060 | 1605 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16418604..16419295 | 692..1 | 3460 | 100 | Minus |
3L | 28110227 | 3L | 16417347..16417736 | 1766..1377 | 1935 | 99.7 | Minus |
3L | 28110227 | 3L | 16418175..16418542 | 1059..692 | 1840 | 100 | Minus |
3L | 28110227 | 3L | 16417789..16418112 | 1383..1060 | 1620 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16411704..16412395 | 692..1 | 3460 | 100 | Minus |
3L | 28103327 | 3L | 16410447..16410836 | 1766..1377 | 1935 | 99.7 | Minus |
3L | 28103327 | 3L | 16411275..16411642 | 1059..692 | 1840 | 100 | Minus |
3L | 28103327 | 3L | 16410889..16411212 | 1383..1060 | 1620 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16407134..16407514 | 1384..1764 | 100 | <- | Minus |
chr3L | 16407574..16407897 | 1060..1383 | 99 | <- | Minus |
chr3L | 16407960..16408326 | 693..1059 | 100 | <- | Minus |
chr3L | 16408389..16409080 | 1..692 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-tyr-RA | 1..1578 | 53..1630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-tyr-RA | 1..1578 | 53..1630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-tyr-RA | 1..1578 | 53..1630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-tyr-RA | 1..1578 | 53..1630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-tyr-RA | 1..1578 | 53..1630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-tyr-RA | 1..1764 | 1..1764 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-tyr-RA | 1..1764 | 1..1764 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-tyr-RA | 8..1771 | 1..1764 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-tyr-RA | 1..1764 | 1..1764 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-tyr-RA | 8..1771 | 1..1764 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16417349..16417729 | 1384..1764 | 100 | <- | Minus |
3L | 16417789..16418112 | 1060..1383 | 100 | <- | Minus |
3L | 16418175..16418541 | 693..1059 | 100 | <- | Minus |
3L | 16418604..16419295 | 1..692 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16417349..16417729 | 1384..1764 | 100 | <- | Minus |
3L | 16417789..16418112 | 1060..1383 | 100 | <- | Minus |
3L | 16418175..16418541 | 693..1059 | 100 | <- | Minus |
3L | 16418604..16419295 | 1..692 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16417349..16417729 | 1384..1764 | 100 | <- | Minus |
3L | 16417789..16418112 | 1060..1383 | 100 | <- | Minus |
3L | 16418175..16418541 | 693..1059 | 100 | <- | Minus |
3L | 16418604..16419295 | 1..692 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16410449..16410829 | 1384..1764 | 100 | <- | Minus |
arm_3L | 16410889..16411212 | 1060..1383 | 100 | <- | Minus |
arm_3L | 16411275..16411641 | 693..1059 | 100 | <- | Minus |
arm_3L | 16411704..16412395 | 1..692 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16410449..16410829 | 1384..1764 | 100 | <- | Minus |
3L | 16410889..16411212 | 1060..1383 | 100 | <- | Minus |
3L | 16411275..16411641 | 693..1059 | 100 | <- | Minus |
3L | 16411704..16412395 | 1..692 | 100 | Minus |
Translation from 0 to 1629
> LD21116.hyp LFVISQRTRKSDKFPKKMVGITPAEKKALITRNLQETLGDDKLTKILAER DLKIYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMK APWSLLELRTKYYEQVIKAMLSSIGVPLEKLKFVKGSDYQLSKEYTLDVY KLSSVVTQHDAKKAGAEVVKQVEYPLLSGLLYPGLQALDEEYLKVDAQFG GVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDSKIDL LDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREA EHGGDVTFLKYEDLEKYYAEDKLHPGDLKATVEKYINRLLDPIRKAFENP ELQKLSAAAYPPPAKVKAGAAPAAGADEDAPHRLDIRVGKVVEVARHPDA DTLYVLKIDLAEAQPRTIISGLVKFVTEEELNQRLVAVLCNLKPSKMRGI LSEGMVLCTSNADHTVVEPIVLPATATAGSRLSFEGFSGTPDEQLNPKKK VWEKLSADFKTNSDGLAVWKDNFLLTPEGEKLSSKLANCSIK*
Translation from 52 to 1629
> LD21116.pep MVGITPAEKKALITRNLQETLGDDKLTKILAERDLKIYWGTATTGKPHVA YFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWSLLELRTKYYEQVI KAMLSSIGVPLEKLKFVKGSDYQLSKEYTLDVYKLSSVVTQHDAKKAGAE VVKQVEYPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTFSEKYLPQ LGYEKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDSPANVKKKLKKAFCE PGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVTFLKYEDLEKY YAEDKLHPGDLKATVEKYINRLLDPIRKAFENPELQKLSAAAYPPPAKVK AGAAPAAGADEDAPHRLDIRVGKVVEVARHPDADTLYVLKIDLAEAQPRT IISGLVKFVTEEELNQRLVAVLCNLKPSKMRGILSEGMVLCTSNADHTVV EPIVLPATATAGSRLSFEGFSGTPDEQLNPKKKVWEKLSADFKTNSDGLA VWKDNFLLTPEGEKLSSKLANCSIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10209-PA | 525 | GF10209-PA | 1..525 | 1..525 | 2579 | 96.2 | Plus |
Dana\GF12729-PA | 292 | GF12729-PA | 134..292 | 366..525 | 423 | 52.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13450-PA | 525 | GG13450-PA | 1..525 | 1..525 | 2714 | 97.7 | Plus |
Dere\GG10606-PA | 320 | GG10606-PA | 51..320 | 282..525 | 432 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15893-PA | 529 | GH15893-PA | 1..529 | 1..525 | 2443 | 89 | Plus |
Dgri\GH22683-PA | 296 | GH22683-PA | 138..296 | 366..525 | 427 | 52.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TyrRS-PA | 525 | CG4561-PA | 1..525 | 1..525 | 2695 | 100 | Plus |
AIMP1-PA | 323 | CG8235-PA | 148..323 | 346..525 | 426 | 50.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16545-PA | 528 | GI16545-PA | 1..528 | 1..525 | 2468 | 89.6 | Plus |
Dmoj\GI20611-PA | 291 | GI20611-PA | 133..291 | 366..525 | 427 | 52.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17993-PA | 525 | GL17993-PA | 1..525 | 1..525 | 2545 | 94.7 | Plus |
Dper\GL10404-PA | 295 | GL10404-PA | 137..295 | 366..525 | 441 | 52.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18259-PA | 525 | GA18259-PA | 1..525 | 1..525 | 2548 | 94.9 | Plus |
Dpse\GA20918-PA | 295 | GA20918-PA | 137..295 | 366..525 | 437 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24400-PA | 498 | GM24400-PA | 1..498 | 1..525 | 2549 | 93.1 | Plus |
Dsec\GM20651-PA | 320 | GM20651-PA | 149..320 | 350..525 | 435 | 50.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12469-PA | 525 | GD12469-PA | 1..525 | 1..525 | 2738 | 98.5 | Plus |
Dsim\GD15265-PA | 313 | GD15265-PA | 152..313 | 353..525 | 373 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Aats-tyr-PA | 528 | GJ12797-PA | 1..528 | 1..525 | 2470 | 90 | Plus |
Dvir\GJ21051-PA | 289 | GJ21051-PA | 131..289 | 366..525 | 414 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17487-PA | 529 | GK17487-PA | 1..529 | 1..525 | 2439 | 89 | Plus |
Dwil\GK10745-PA | 290 | GK10745-PA | 132..290 | 366..525 | 414 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22552-PA | 525 | GE22552-PA | 1..525 | 1..525 | 2726 | 98.1 | Plus |
Dyak\GE22999-PA | 525 | GE22999-PA | 1..525 | 1..525 | 2723 | 97.9 | Plus |
Dyak\GE22699-PA | 111 | GE22699-PA | 1..111 | 414..525 | 233 | 43.4 | Plus |