BDGP Sequence Production Resources |
Search the DGRC for LD21120
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 211 |
Well: | 20 |
Vector: | pOT2 |
Associated Gene/Transcript | Prp18-RA |
Protein status: | LD21120.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1304 |
Gene | Date | Evidence |
---|---|---|
CG6011 | 2001-01-01 | Release 2 assignment |
CG6011 | 2002-05-31 | Blastp of sequenced clone |
CG6011 | 2003-01-01 | Sim4 clustering to Release 3 |
Prp18 | 2008-04-29 | Release 5.5 accounting |
Prp18 | 2008-08-15 | Release 5.9 accounting |
Prp18 | 2008-12-18 | 5.12 accounting |
1304 bp (1304 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118327
> LD21120.complete CTAAGGCATTTGTTTTGGTTACTCCACATTGTTATTAACTACAAATAACA ATCACATGGATATTCTGAAAGCTGAAATAGCGCGAAAGCGCAAGCTGCTG GAGCAAAGGCAGCTGGTGGACGAAAAGAAGAAGTACTTCAGACGCGGTGA CCTGAACGCCAAGAACACAGAGGAAGTGCTGCAGAAGGTGGGCTACATAA AGCAGGAGTCCGTCGAGGCACAAGGACAAACGACCGAAGGCGCGTACAGT TTTGTGGCCGATGGCCAGAACATATTGCCGCGCACGGAGGTCATTCGGAG GCTAAGGGAACGCGGCGAACCCATCCTTATATTTGGCGAGACGGAGCCCG AGGCCTTTGACCGATTGCGACAATGCGAGATTTCGCAGCCAGAGGCAAAT CGCGGTTTCCGCAACGATTTCCAGGAGGCCATGGAGCAGGTGGACGCCGC CTACCTGCAGGAGATGTTCGCCAACACACCCACCACCAAGGAAGACAAGA AGTCGGACTTCGCTGAGCTCGACGAGTCCGTGTCGTGGGAGAGCATACAG ACAATGGCTGCAAATATGGGCCGCAACAAGGACTACGACATGGATGTGAT CATCACGCTGCTCACCTTCCTGCTCAAGCTGTGGAACGACCAGATCGCCA ACTACAGCAAGCACGAAAAGATGTCCACAAAGGTGAAAATGACCCGCGTC ATTTACACGCAGACTAAGGAATACGTTAAGCCGCTGTTTCGCAAGTTAAA GCATCACACCCTGCCAGAGGACATTCTGGACAGTCTGCGAGACATCTGCA AGCACCTGCTCAACCGCAACTATATCACAGCAAGCGATGCCTACCTAGAA ATGGCCATCGGAAACGCGCCTTGGCCCATTGGTGTCACTATGGTGGGTAT CCACGCTCGTACGGGTCGCGAAAAGATTTTCTCCAAAAACGTAGCCCACG TAATGAACGATGAAACACAACGGAAGTACATCCAGGGTCTCAAACGACTG ATGACCAAGTGCCAAGAGTACTTTCCCACCGATCCCTCCAAGTGCGTGGA GTACGTCAGCAAGAAGGATCGGGAATAAACTTGAGCTTTATGTTAGTCAT TATTGTAATAACAATATCAAGCGTTTAACTATATGTATGTGTAGAGAGCA AGGGGATGTTCCGGGGGATTACATTTTCACTTCTTTCCCAGTTCAGCAGA GCGCTGTGACGACTTTTCCACGGCGTTTATTAAAGTAGACCTGAAAGCAC GAAAGAAAGCAATAAAAAAACAGTGTAATGTAAAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 14853951..14855231 | 1281..1 | 6330 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19029967..19031248 | 1282..1 | 6410 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 18770798..18772079 | 1282..1 | 6410 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 14853951..14855231 | 1..1281 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp18-RA | 1..1023 | 56..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp18-RA | 1..1023 | 56..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp18-RA | 1..1023 | 56..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp18-RA | 1..1023 | 56..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp18-RA | 1..1023 | 56..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp18-RA | 4..1284 | 1..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp18-RA | 4..1284 | 1..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp18-RA | 4..1284 | 1..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp18-RA | 4..1284 | 1..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prp18-RA | 24..1304 | 1..1281 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19029968..19031248 | 1..1281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19029968..19031248 | 1..1281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19029968..19031248 | 1..1281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 14855690..14856970 | 1..1281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18770799..18772079 | 1..1281 | 100 | Minus |
Translation from 55 to 1077
> LD21120.hyp MDILKAEIARKRKLLEQRQLVDEKKKYFRRGDLNAKNTEEVLQKVGYIKQ ESVEAQGQTTEGAYSFVADGQNILPRTEVIRRLRERGEPILIFGETEPEA FDRLRQCEISQPEANRGFRNDFQEAMEQVDAAYLQEMFANTPTTKEDKKS DFAELDESVSWESIQTMAANMGRNKDYDMDVIITLLTFLLKLWNDQIANY SKHEKMSTKVKMTRVIYTQTKEYVKPLFRKLKHHTLPEDILDSLRDICKH LLNRNYITASDAYLEMAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVM NDETQRKYIQGLKRLMTKCQEYFPTDPSKCVEYVSKKDRE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prp18-PA | 340 | CG6011-PA | 1..340 | 1..340 | 1760 | 100 | Plus |
Translation from 55 to 1077
> LD21120.pep MDILKAEIARKRKLLEQRQLVDEKKKYFRRGDLNAKNTEEVLQKVGYIKQ ESVEAQGQTTEGAYSFVADGQNILPRTEVIRRLRERGEPILIFGETEPEA FDRLRQCEISQPEANRGFRNDFQEAMEQVDAAYLQEMFANTPTTKEDKKS DFAELDESVSWESIQTMAANMGRNKDYDMDVIITLLTFLLKLWNDQIANY SKHEKMSTKVKMTRVIYTQTKEYVKPLFRKLKHHTLPEDILDSLRDICKH LLNRNYITASDAYLEMAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVM NDETQRKYIQGLKRLMTKCQEYFPTDPSKCVEYVSKKDRE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16419-PA | 340 | GF16419-PA | 1..340 | 1..340 | 1760 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16208-PA | 340 | GG16208-PA | 1..340 | 1..340 | 1795 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22411-PA | 338 | GH22411-PA | 1..338 | 1..340 | 1681 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prp18-PA | 340 | CG6011-PA | 1..340 | 1..340 | 1760 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24151-PA | 338 | GI24151-PA | 1..338 | 1..340 | 1696 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13914-PA | 340 | GL13914-PA | 1..340 | 1..340 | 1752 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19293-PA | 340 | GA19293-PA | 1..340 | 1..340 | 1752 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23352-PA | 340 | GM23352-PA | 1..340 | 1..340 | 1823 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20137-PA | 340 | GD20137-PA | 1..340 | 1..340 | 1821 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23455-PA | 338 | GJ23455-PA | 1..338 | 1..340 | 1673 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13717-PA | 340 | GK13717-PA | 1..340 | 1..340 | 1733 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25155-PA | 340 | GE25155-PA | 1..340 | 1..340 | 1810 | 98.5 | Plus |