Clone LD21213 Report

Search the DGRC for LD21213

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:212
Well:13
Vector:pOT2
Associated Gene/TranscriptSap130-RA
Protein status:LD21213.pep: gold
Preliminary Size:4006
Sequenced Size:4688

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11006 2000-02-14 Blastp of sequenced clone
CG11006 2001-01-01 Release 2 assignment
CG11006 2008-04-29 Release 5.5 accounting
CG11006 2008-08-15 Release 5.9 accounting
RpS24 2008-08-15 Release 5.9 accounting
CG11006 2008-12-18 5.12 accounting
RpS24 2008-12-18 5.12 accounting

Clone Sequence Records

LD21213.complete Sequence

4688 bp (4688 high quality bases) assembled on 2000-02-14

GenBank Submission: AF132162

> LD21213.complete
AAAAGAAGAGCGGAAAACAAGAAAAACTTCTCGTATTAATAGGTGGCGCG
GTAAAAATCATCAAGTCTAATTTGCTGCGCTTAATGTGTGCGACCAATTA
GCATAAAAAGATATCGCAAAATCAAAGCTGGAATAATGAGTGCGCCTAGT
GAGGGTGGCGCGGGAGGAGGGCCGGTGGGCGGTGGAAGTACAGCTACAGC
GCCATCAGCGCACCCGGCGGTGGCCGCCAAGATCACCCACGTGAAATCCG
ACGGCGGCGGTGGGATATCCATTGCGGGCACACCGATCCTCAGCGGAGGC
ACAATTAAGGTGGCGTCAGCCAATCAAGTTCAACAAACTTCCCTAGGTGG
CACTCCAATTGCTCTGAATGCAGGACAAGCGACTACGGCAGCTTCGATCC
GTGCTATTGGCGCTGGTGGTCAGTCCACACAGGTGCGGGTGGTGATGCCA
ATGATCAAGCAGCTAGAGAATGTTACGGCCACCGGAAGGACTCAGATAAC
AGCCATACCAGCTGCACCGGCGAGGAGTGGGGCGAATGCATCGATCACGG
TTACCAGGCCCGTAACCCAGGCCACATACTTGCCGCGAGCCAGTGTGACG
GCCACCCAAATGGGAGGCGTTGGCGTTGGAGTTGGCCAGCGGCTCGTCAC
GCCATTGAGAGCCACATCATCGGCCACGGTTACGCCCACAGCGCCAACAG
TGCTGAGCTCAACCGGAGGATTCGTACGCGGAGCAACAGCATCGGTGAGC
AGAAGTGGAGTGGCGCTCACATCGCAACCATCGTCGGCTGTCATCTCGTC
CAGCAACAGTGGTGCTTGGATGCAGAGTCAGGGACAGGTGCAACTGATCC
GAACCATTCATCAGCCGCGCCAGCGAATTATAACGACATCCGCGGGGGTT
TCGAATGCCAGTGTAGTGACCACTACTCCAGTGCAGGCGCCAACAGCTCT
TTCCGTTTCCGCTGGCCAGCCCTTGGCGACACAACAGGCGACGGGACCGG
GAGGAGGTCCTCAGGCCTATGTGGCTACTGTATTGCCACAGAGGCAGCAT
CAGGCTACACTAGTTTACTCCTCCAATGTGTCTGCACCGAATGCAAGTCA
GAATCCGGGTCAGCAATTTAATCCACGCTTTGCTGTGGCCACGCCCACAG
GCGGAGTAACAACAACGACGCCCGGTGGAACGACAGTAACACCTCGACAG
GTGCGACCAATTCCGCTGGGCAAGAGTTTTCCAACCGCTAAGCTGAACAC
AACCAGCATAAGTATCAGGGCACCAAGCATACCGCAGCTGAATACCAGCG
TTACGGCATCTCCAACGGCCGTTAGTGTTTCCGGTGGAGCAACAGTGGCA
CCCGGGCGGGGTCCCGGAGCCGGAGGAACTGCTCTGACGGCCACTAATTT
GCCCACCACACGGATCATTCAGCTGCAGCAGCCAGCGACGGGAACCACTC
AACAGATCATCGGATCCGGAGCTCGTCTGGCCGGGAACGTGATGCTGCAG
CCATTCTTGATGAGCACTACCGCGGCGGCTAAGATGGGCATTCGTCCACC
TGTCACCATGACCGCTAAGGTTCAGCCATCGCTAACTATTACACAGCTTA
ATCCCATCGGAAAACTGTCAGCTGGCGGAGGAAGTGGAGGACAAACAATG
GGGCCGCAGGGCGTGGCCAGCATCCAGGCGGTGCCAGTGCCGAATGTCTC
TGCCAGTGTGGTCAATTCAAGCTCGGTGACGGGTGCCACATCGGCGGCCG
GTGGAGCCACTGTCCTGCCACTTACCATCAGTGGCAGGGGAGCGGGAGTG
GGACCAGGCGGTAATATCCTCACGGGAACTCTGACGCCCATCAAGAACGC
AAGCGGCATCACTTTGGGCAAGATGATGATGGCACCAGCTTCTTCTGCCC
CTGGAGCAGATGGTTCCAGCACAAGCGGGGCAACAGTGACGGGCTTTCAA
CGCACCTGGAATCCTGTAGTTGCTTCACAGAGCCAGTTGATGAAGATCGA
TGAGAAGGGAAGTGCTGCCACAATCTACTACGAATCTATGCCAGCCTCCG
CCTCCACAGGCGTTCTATCATTGACTACGACAACAGTGACGCAGAGCACC
CAGGCGCAGGCACAATTGGTTAGCAGCGCCGGTGGCAGCTTGTCGGTATC
TTCGTTACCCTTTGCAAGTCACGCGACTGCCGGAGCGGGATCAGGTGGCG
GCGGATCGCAGGCTACTTTTACGGTGTTGCCGTCGGGGGCTGGTGGAACA
GCCACCCGAACCATTGGCCACCAGCAATTGATAATACCAGCAGGACCAAA
TAGTGCGCCGCCGCAGCACATGGTTATTCCGCTGCATACGTCCGTTAAGG
TGACCACGGGAGCGGGCAATCCGCAACAAGCAACTGCAAGTGGAGCACTG
GTGTCCAGCTTTATGCGCAAGCGGGATGCGGAAGGTTCGCCAATACGGGC
GGCTAAAAATCTAGGACCCACTTTGCTTTCAATGGCTAGCAATAACAGTG
GACAAAACATGCCACCGGCTCCGGGCACCACGTTCAACATTCAGCCGGTG
TCCGTGACAGTGCCTCAATCAGTTGGCTCTGGGCTGACCGTAGAGGCGCT
GGCCAAGAAGGAACGGGAGCGAGTCACCCATGGTGTAGCAAGTAGCGCCG
CTAGTGTGCCTGCCACAGTTGGCCCCGTGAACTCAACGAGAAATTCGAGG
GCGGACTCGCCGGCTTCGTCGGACGGCTCAACTACAGTGTCGGCGAATTC
CTCACCTGGTGTGGATCAGCAATTACAGGACAGGATTGGCGATCAGCCAG
CCACGGGAGGCGCTGGTGGGCGCGATAATTCCACGCATTTTAATCCCATT
AATGAGATGTACTCATCACACCAATCGATTCAGCAGAACCTTGGTCACTC
CTCACTGGGAGCCCGCAGTGGTAGCAGTGCCTTTGTGGATGTGCAAGCAC
CAACGCCGCAGCAACAGCAGCCTCAGCAGGTGCCTCATTTGGTGGGATCG
ACGCAGATGCAACAAGGAACGCGTATGAATGGTACTGGTAATAGCTCCAG
CTCCAGTTATGACTGCTCCTCTAGGAAAAAGCCGCGACGATCGACCAATG
ACAGCCAGCACTCTACGCAGAGTCAAGCATCCTTATCGCTGCCACCTCCA
AGTTCGGAGCCAACGCCGCCGGCTGGCGCTTCGTACATGCAGAAGCACAA
CAATGGAGGACTACTGGTGACAGCAGCGACCCCGGGTGTTGCTCCCAACA
GTGCGCCAGGCGATGCCAACCACCGGAACAGTACACCTGCTGTGGCGGGC
AACAAGGAGAACGCAAATCCCGTCGACTTTGTGATTCGTCGTCCGCGCAA
TTGTGCTTTGCTCAATACGTATAAGCCCACACATAAGTTGGCCAACAATC
ATTTTCATCGGTACACTGATGTTAAGCCAAGGGAGGAGCGGCGGGCCACA
GTCATTGATTTGGCCAATCAGCCAAATGTGCAGGGCAAAATCAATGGATG
GAAAATTTATCATTTACGCTCGCAAATGGAGGACTTGAATGAATCGGAAG
TCTTTAGTCTGGGCAGGCTGGAGACCATGCTGCAGGATCTCGAAAAGGAC
AAGGAGAAGCACAGCGAAATTGAGCGAGTCACTGAACTGCTAAAGGGAAA
CATTCAACGCAGCAAGATTATTACCGATGGCATCAACGAGGCACAGAATC
AGTTAATGAAGATCTTCGAGCATAAGCCACACGTTTCTAATATAATCACC
CGCTGCGCTTCGAAAAGGAATTTCAAGAAGCGCGAAAAGATCTAAAAGTA
ATTGACGAACGGAGATGGCCAGCCAAGTGTGTATTAATAAGTTGTACATT
ACCTAATTTAAGCAGAAATTATAGAATCCAAGATAATTACCTTAAACGCG
ATCGATTTGTAAGTCGTACAGCTACAAAGAAAACCAGCAATATTTTTTCA
ATTTATTAAGCTAGAAACACAAATACAAAAACCCTCGAGTTGTATTAAGT
AGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGGCAAA
ACGACGTGTTTAAAACCTTTTCAAGTGTTTTAAAAGCTCCGTCAAAATGT
CCGGTACAACCGCTACCATCCGCACCCGCAAGTTCATGACCAACCGCCTG
CTCGCCAGGAAACAGATGGTCTGCGATGTCCTCCACCCAGGATTGTCGTC
GGTGAACAAGACCGAGATCCGCGAGAAGCTCGCCGCCATGTACAAGGTCA
CCCCCGATGTGGTCTTCGCCTTCGGATTCCGCACCAACTTCGGTGGCGGC
CGCTCCACCGGCTTTGCCCTCATCTACGACACCCTGGACTTCGCCAAGAA
GTTCGAGCCCAAGTACCGCCTGGCCCGTCACGGCCTCTTCGAACAGAAGA
AGCAGACCCGCAAGCAGCGCAAGGAGCGTCGCAACAGGATGAAGAAGGTG
CGCGGTACTGCCAAGGCCAAGATCGGCACTGGCAAGAAGTAAGCCTGATG
GAGGAAAGCTCGTCTGCGGGCATCGCCTGCTATTCCCAAAAGCTGCTGGT
TATGCGTTAGTCAAACTTCTTTACCAACCAATCAACAACCGACAAAACAA
AATCAGTGTTTACTTTTGGAGCGGCTTTTGTTTGTAAACTAAGGAAATAA
AACTCTAAAAGTATAAAAAAAAAAAAAAAAAAAAAAAA

LD21213.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:43:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG11006-RC 4283 CG11006-RC 483..4283 206..4006 18990 99.9 Plus
CG11006-RB 4208 CG11006-RB 408..4208 206..4006 18990 99.9 Plus
CG11006.d 4291 CG11006.d 495..4291 206..4002 18970 99.9 Plus
CG11006-RC 4283 CG11006-RC 53..261 1..209 1045 100 Plus
CG11006-RB 4208 CG11006-RB 89..297 1..209 1045 100 Plus
CG11006.d 4291 CG11006.d 53..261 1..209 1045 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:34:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12801083..12801949 1994..2860 4305 99.8 Plus
chr3L 24539361 chr3L 12797447..12798187 206..946 3660 99.6 Plus
chr3L 24539361 chr3L 12798241..12798834 945..1538 2955 99.8 Plus
chr2R 21145070 chr2R 18527052..18527631 4664..4085 2870 99.7 Minus
chr3L 24539361 chr3L 12800562..12801020 1537..1995 2295 100 Plus
chr3L 24539361 chr3L 12803035..12803397 3644..4006 1770 99.2 Plus
chr3L 24539361 chr3L 12802307..12802577 3096..3366 1340 99.6 Plus
chr3L 24539361 chr3L 12802003..12802243 2855..3095 1205 100 Plus
chr3L 24539361 chr3L 12802637..12802807 3367..3537 825 98.8 Plus
chr3L 24539361 chr3L 12802865..12802974 3537..3646 550 100 Plus
chr3L 24539361 chr3L 12796299..12796408 1..110 535 99.1 Plus
chr3L 24539361 chr3L 12796595..12796694 109..208 500 100 Plus
chr2R 21145070 chr2R 18527880..18527920 4086..4046 205 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:08:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:34:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12810726..12811592 1994..2860 4320 99.9 Plus
3L 28110227 3L 12807090..12807830 206..946 3705 100 Plus
3L 28110227 3L 12807884..12808477 945..1538 2970 100 Plus
2R 25286936 2R 22640527..22641107 4665..4085 2905 100 Minus
3L 28110227 3L 12810205..12810663 1537..1995 2295 100 Plus
3L 28110227 3L 12812678..12813040 3644..4006 1815 100 Plus
3L 28110227 3L 12811950..12812220 3096..3366 1355 100 Plus
3L 28110227 3L 12811646..12811886 2855..3095 1205 100 Plus
3L 28110227 3L 12812280..12812450 3367..3537 840 99.4 Plus
3L 28110227 3L 12805945..12806054 1..110 550 100 Plus
3L 28110227 3L 12812508..12812617 3537..3646 550 100 Plus
3L 28110227 3L 12806238..12806337 109..208 500 100 Plus
2R 25286936 2R 22641354..22641394 4086..4046 205 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 12803826..12804692 1994..2860 4320 99.8 Plus
3L 28103327 3L 12800190..12800930 206..946 3705 100 Plus
3L 28103327 3L 12800984..12801577 945..1538 2970 100 Plus
2R 25260384 2R 22641726..22642306 4665..4085 2905 100 Minus
3L 28103327 3L 12803305..12803763 1537..1995 2295 100 Plus
3L 28103327 3L 12805778..12806140 3644..4006 1815 100 Plus
3L 28103327 3L 12805050..12805320 3096..3366 1355 100 Plus
3L 28103327 3L 12804746..12804986 2855..3095 1205 100 Plus
3L 28103327 3L 12805380..12805550 3367..3537 840 99.4 Plus
3L 28103327 3L 12805608..12805717 3537..3646 550 100 Plus
3L 28103327 3L 12799045..12799154 1..110 550 100 Plus
3L 28103327 3L 12799338..12799437 109..208 500 100 Plus
2R 25260384 2R 22642553..22642593 4086..4046 205 100 Minus
Blast to na_te.dros performed on 2019-03-16 04:34:53 has no hits.

LD21213.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:35:46 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12802307..12802577 3096..3366 99 -> Plus
chr3L 12802637..12802807 3367..3537 98 -> Plus
chr3L 12802866..12802973 3538..3645 100 -> Plus
chr3L 12796299..12796408 1..110 99 -> Plus
chr3L 12796597..12796694 111..208 100 -> Plus
chr3L 12797450..12798187 209..946 99 -> Plus
chr3L 12798243..12798833 947..1537 99 -> Plus
chr3L 12800563..12801020 1538..1995 100 -> Plus
chr3L 12801085..12801945 1996..2856 99 -> Plus
chr3L 12802005..12802243 2857..3095 100 -> Plus
chr3L 12803037..12803397 3646..4006 99 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:55:34 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
CG11006-RE 1..76 136..213 97 <- Plus
CG11006-RE 193..3774 214..3795 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:36:35 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
Sap130-RE 1..76 136..213 97 <- Plus
Sap130-RE 193..3774 214..3795 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:34:57 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
Sap130-RA 1..3660 136..3795 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:12:34 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
CG11006-RE 1..76 136..213 97 <- Plus
CG11006-RE 193..3774 214..3795 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:44:33 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
Sap130-RA 1..3660 136..3795 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:39:58 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
CG11006-RA 53..4064 1..4008 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:36:34 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
Sap130-RA 53..4054 1..4002 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:34:57 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
Sap130-RA 44..4045 1..4002 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:12:34 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
CG11006-RA 53..4064 1..4008 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:44:33 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
Sap130-RA 44..4045 1..4002 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:35:46 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12805945..12806054 1..110 100 -> Plus
3L 12806240..12806337 111..208 100 -> Plus
3L 12807093..12807830 209..946 100 -> Plus
3L 12807886..12808476 947..1537 100 -> Plus
3L 12810206..12810663 1538..1995 100 -> Plus
3L 12810728..12811588 1996..2856 100 -> Plus
3L 12811648..12811886 2857..3095 100 -> Plus
3L 12811950..12812220 3096..3366 100 -> Plus
3L 12812280..12812450 3367..3537 99 -> Plus
3L 12812509..12812616 3538..3645 100 -> Plus
3L 12812680..12813039 3646..4005 100 <- Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:35:46 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12805945..12806054 1..110 100 -> Plus
3L 12806240..12806337 111..208 100 -> Plus
3L 12807093..12807830 209..946 100 -> Plus
3L 12807886..12808476 947..1537 100 -> Plus
3L 12810206..12810663 1538..1995 100 -> Plus
3L 12810728..12811588 1996..2856 100 -> Plus
3L 12811648..12811886 2857..3095 100 -> Plus
3L 12811950..12812220 3096..3366 100 -> Plus
3L 12812280..12812450 3367..3537 99 -> Plus
3L 12812509..12812616 3538..3645 100 -> Plus
3L 12812680..12813039 3646..4005 100 <- Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:35:46 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12805945..12806054 1..110 100 -> Plus
3L 12806240..12806337 111..208 100 -> Plus
3L 12807093..12807830 209..946 100 -> Plus
3L 12807886..12808476 947..1537 100 -> Plus
3L 12810206..12810663 1538..1995 100 -> Plus
3L 12810728..12811588 1996..2856 100 -> Plus
3L 12811648..12811886 2857..3095 100 -> Plus
3L 12811950..12812220 3096..3366 100 -> Plus
3L 12812280..12812450 3367..3537 99 -> Plus
3L 12812509..12812616 3538..3645 100 -> Plus
3L 12812680..12813039 3646..4005 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:34:57 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12799045..12799154 1..110 100 -> Plus
arm_3L 12799340..12799437 111..208 100 -> Plus
arm_3L 12800193..12800930 209..946 100 -> Plus
arm_3L 12800986..12801576 947..1537 100 -> Plus
arm_3L 12803306..12803763 1538..1995 100 -> Plus
arm_3L 12803828..12804688 1996..2856 100 -> Plus
arm_3L 12804748..12804986 2857..3095 100 -> Plus
arm_3L 12805050..12805320 3096..3366 100 -> Plus
arm_3L 12805380..12805550 3367..3537 99 -> Plus
arm_3L 12805609..12805716 3538..3645 100 -> Plus
arm_3L 12805780..12806139 3646..4005 100 <- Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:49:03 Download gff for LD21213.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12805050..12805320 3096..3366 100 -> Plus
3L 12805380..12805550 3367..3537 99 -> Plus
3L 12805609..12805716 3538..3645 100 -> Plus
3L 12805780..12806139 3646..4005 100 <- Plus
3L 12800193..12800930 209..946 100 -> Plus
3L 12800986..12801576 947..1537 100 -> Plus
3L 12803306..12803763 1538..1995 100 -> Plus
3L 12803828..12804688 1996..2856 100 -> Plus
3L 12804748..12804986 2857..3095 100 -> Plus
3L 12799045..12799154 1..110 100 -> Plus
3L 12799340..12799437 111..208 100 -> Plus

LD21213.pep Sequence

Translation from 135 to 3794

> LD21213.pep
MSAPSEGGAGGGPVGGGSTATAPSAHPAVAAKITHVKSDGGGGISIAGTP
ILSGGTIKVASANQVQQTSLGGTPIALNAGQATTAASIRAIGAGGQSTQV
RVVMPMIKQLENVTATGRTQITAIPAAPARSGANASITVTRPVTQATYLP
RASVTATQMGGVGVGVGQRLVTPLRATSSATVTPTAPTVLSSTGGFVRGA
TASVSRSGVALTSQPSSAVISSSNSGAWMQSQGQVQLIRTIHQPRQRIIT
TSAGVSNASVVTTTPVQAPTALSVSAGQPLATQQATGPGGGPQAYVATVL
PQRQHQATLVYSSNVSAPNASQNPGQQFNPRFAVATPTGGVTTTTPGGTT
VTPRQVRPIPLGKSFPTAKLNTTSISIRAPSIPQLNTSVTASPTAVSVSG
GATVAPGRGPGAGGTALTATNLPTTRIIQLQQPATGTTQQIIGSGARLAG
NVMLQPFLMSTTAAAKMGIRPPVTMTAKVQPSLTITQLNPIGKLSAGGGS
GGQTMGPQGVASIQAVPVPNVSASVVNSSSVTGATSAAGGATVLPLTISG
RGAGVGPGGNILTGTLTPIKNASGITLGKMMMAPASSAPGADGSSTSGAT
VTGFQRTWNPVVASQSQLMKIDEKGSAATIYYESMPASASTGVLSLTTTT
VTQSTQAQAQLVSSAGGSLSVSSLPFASHATAGAGSGGGGSQATFTVLPS
GAGGTATRTIGHQQLIIPAGPNSAPPQHMVIPLHTSVKVTTGAGNPQQAT
ASGALVSSFMRKRDAEGSPIRAAKNLGPTLLSMASNNSGQNMPPAPGTTF
NIQPVSVTVPQSVGSGLTVEALAKKERERVTHGVASSAASVPATVGPVNS
TRNSRADSPASSDGSTTVSANSSPGVDQQLQDRIGDQPATGGAGGRDNST
HFNPINEMYSSHQSIQQNLGHSSLGARSGSSAFVDVQAPTPQQQQPQQVP
HLVGSTQMQQGTRMNGTGNSSSSSYDCSSRKKPRRSTNDSQHSTQSQASL
SLPPPSSEPTPPAGASYMQKHNNGGLLVTAATPGVAPNSAPGDANHRNST
PAVAGNKENANPVDFVIRRPRNCALLNTYKPTHKLANNHFHRYTDVKPRE
ERRATVIDLANQPNVQGKINGWKIYHLRSQMEDLNESEVFSLGRLETMLQ
DLEKDKEKHSEIERVTELLKGNIQRSKIITDGINEAQNQLMKIFEHKPHV
SNIITRCASKRNFKKREKI*

LD21213.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23573-PA 1293 GF23573-PA 106..1293 24..1219 4258 82.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:16:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15599-PA 1215 GG15599-PA 1..1215 1..1219 5194 95.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:16:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\anon-1-PA 1296 GH17068-PA 24..1296 25..1219 3152 62.1 Plus
Dgri\GH23785-PA 497 GH23785-PA 15..461 23..467 1265 70.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:43
Subject Length Description Subject Range Query Range Score Percent Strand
Sap130-PA 1219 CG11006-PA 1..1219 1..1219 6140 100 Plus
Sap130-PB 1257 CG11006-PB 1..1257 1..1219 6091 97 Plus
Sap130-PE 1257 CG11006-PE 1..1257 1..1219 6091 97 Plus
Sap130-PG 1210 CG11006-PG 1..1210 1..1219 6074 99.3 Plus
Sap130-PF 1209 CG11006-PF 1..1209 1..1219 6068 99.2 Plus
Sap130-PC 1294 CG11006-PC 99..1294 24..1219 6016 99.9 Plus
Muc68Ca-PA 3135 CG18331-PA 372..1449 15..1053 272 20.6 Plus
Muc68Ca-PA 3135 CG18331-PA 767..1849 5..1035 261 20.3 Plus
Muc68Ca-PA 3135 CG18331-PA 132..1156 15..1008 260 20.7 Plus
Muc68Ca-PA 3135 CG18331-PA 1492..2574 15..1045 238 19.8 Plus
Muc68Ca-PA 3135 CG18331-PA 85..996 117..1008 236 20.4 Plus
Sgs1-PA 1286 CG3047-PA 175..907 122..874 234 20 Plus
Sgs1-PA 1286 CG3047-PA 405..1099 114..874 234 22.2 Plus
Sgs1-PA 1286 CG3047-PA 196..987 81..874 211 19.7 Plus
CG46026-PA 666 CG46026-PA 127..664 45..675 211 21.1 Plus
Alh-PD 1323 CG1070-PD 225..1064 53..875 210 20.2 Plus
Alh-PA 1376 CG1070-PA 278..1117 53..875 210 20.2 Plus
Alh-PL 1332 CG1070-PL 225..1073 53..875 202 20.3 Plus
Alh-PK 1385 CG1070-PK 278..1126 53..875 202 20.3 Plus
CG46026-PA 666 CG46026-PA 123..662 169..741 193 20.5 Plus
MED1-PA 1475 CG7162-PA 680..1457 312..1034 184 21.1 Plus
Sgs1-PA 1286 CG3047-PA 598..1155 68..655 182 21 Plus
Alh-PB 824 CG1070-PB 122..565 380..875 169 20.8 Plus
Alh-PN 1052 CG1070-PN 122..565 380..875 169 20.8 Plus
Alh-PM 1084 CG1070-PM 122..565 380..875 169 20.8 Plus
Alh-PO 1133 CG1070-PO 122..565 380..875 169 20.8 Plus
Alh-PI 1134 CG1070-PI 122..565 380..875 169 20.8 Plus
Alh-PH 1165 CG1070-PH 122..565 380..875 169 20.8 Plus
Alh-PJ 1448 CG1070-PJ 122..565 380..875 169 20.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:16:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11663-PA 1279 GI11663-PA 31..1279 29..1219 3247 64.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:16:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22680-PA 1260 GL22680-PA 23..1260 22..1219 4044 76.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:16:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10703-PA 1260 GA10703-PA 23..1260 22..1219 4054 76.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25373-PA 932 GM25373-PA 1..621 1..621 2583 97.9 Plus
Dsec\GM25373-PA 932 GM25373-PA 618..932 905..1219 1479 97.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14406-PA 1011 GD14406-PA 273..1011 469..1219 3110 91.7 Plus
Dsim\GD17636-PA 242 GD17636-PA 1..238 229..467 1151 99.2 Plus
Dsim\GD14406-PA 1011 GD14406-PA 100..246 24..170 654 98 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:16:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11341-PA 1305 GJ11341-PA 22..1305 19..1219 3437 64.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:16:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16826-PA 1352 GK16826-PA 34..1352 28..1219 3026 62.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:16:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21925-PA 1220 GE21925-PA 1..1220 1..1219 6023 97 Plus

LD21213.hyp Sequence

Translation from 135 to 3794

> LD21213.hyp
MSAPSEGGAGGGPVGGGSTATAPSAHPAVAAKITHVKSDGGGGISIAGTP
ILSGGTIKVASANQVQQTSLGGTPIALNAGQATTAASIRAIGAGGQSTQV
RVVMPMIKQLENVTATGRTQITAIPAAPARSGANASITVTRPVTQATYLP
RASVTATQMGGVGVGVGQRLVTPLRATSSATVTPTAPTVLSSTGGFVRGA
TASVSRSGVALTSQPSSAVISSSNSGAWMQSQGQVQLIRTIHQPRQRIIT
TSAGVSNASVVTTTPVQAPTALSVSAGQPLATQQATGPGGGPQAYVATVL
PQRQHQATLVYSSNVSAPNASQNPGQQFNPRFAVATPTGGVTTTTPGGTT
VTPRQVRPIPLGKSFPTAKLNTTSISIRAPSIPQLNTSVTASPTAVSVSG
GATVAPGRGPGAGGTALTATNLPTTRIIQLQQPATGTTQQIIGSGARLAG
NVMLQPFLMSTTAAAKMGIRPPVTMTAKVQPSLTITQLNPIGKLSAGGGS
GGQTMGPQGVASIQAVPVPNVSASVVNSSSVTGATSAAGGATVLPLTISG
RGAGVGPGGNILTGTLTPIKNASGITLGKMMMAPASSAPGADGSSTSGAT
VTGFQRTWNPVVASQSQLMKIDEKGSAATIYYESMPASASTGVLSLTTTT
VTQSTQAQAQLVSSAGGSLSVSSLPFASHATAGAGSGGGGSQATFTVLPS
GAGGTATRTIGHQQLIIPAGPNSAPPQHMVIPLHTSVKVTTGAGNPQQAT
ASGALVSSFMRKRDAEGSPIRAAKNLGPTLLSMASNNSGQNMPPAPGTTF
NIQPVSVTVPQSVGSGLTVEALAKKERERVTHGVASSAASVPATVGPVNS
TRNSRADSPASSDGSTTVSANSSPGVDQQLQDRIGDQPATGGAGGRDNST
HFNPINEMYSSHQSIQQNLGHSSLGARSGSSAFVDVQAPTPQQQQPQQVP
HLVGSTQMQQGTRMNGTGNSSSSSYDCSSRKKPRRSTNDSQHSTQSQASL
SLPPPSSEPTPPAGASYMQKHNNGGLLVTAATPGVAPNSAPGDANHRNST
PAVAGNKENANPVDFVIRRPRNCALLNTYKPTHKLANNHFHRYTDVKPRE
ERRATVIDLANQPNVQGKINGWKIYHLRSQMEDLNESEVFSLGRLETMLQ
DLEKDKEKHSEIERVTELLKGNIQRSKIITDGINEAQNQLMKIFEHKPHV
SNIITRCASKRNFKKREKI*

LD21213.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:59:44
Subject Length Description Subject Range Query Range Score Percent Strand
Sap130-PA 1219 CG11006-PA 1..1219 1..1219 6140 100 Plus
Sap130-PB 1257 CG11006-PB 1..1257 1..1219 6091 97 Plus
Sap130-PE 1257 CG11006-PE 1..1257 1..1219 6091 97 Plus
Sap130-PG 1210 CG11006-PG 1..1210 1..1219 6074 99.3 Plus
Sap130-PF 1209 CG11006-PF 1..1209 1..1219 6068 99.2 Plus