Clone LD21248 Report

Search the DGRC for LD21248

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:212
Well:48
Vector:pOT2
Associated Gene/TranscriptVha100-1-RC
Protein status:LD21248.pep: gold
Preliminary Size:2937
Sequenced Size:2945

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1709 2000-02-14 Blastp of sequenced clone
CG1709 2001-01-01 Release 2 assignment
CG1709 2003-01-01 Sim4 clustering to Release 3
Vha100-1 2008-04-29 Release 5.5 accounting
Vha100-1 2008-08-15 Release 5.9 accounting
Vha100-1 2008-12-18 5.12 accounting

Clone Sequence Records

LD21248.complete Sequence

2945 bp (2945 high quality bases) assembled on 2000-02-14

GenBank Submission: AF132163

> LD21248.complete
GTTGCTGGAGTTTGTGGACGAATTTATATTTAATTTTTAAGCACTTGATA
TCGGGAATCCGGCTGCCACAATGGGTTCCCTATTCCGCAGCGAGGAAATG
GCGCTGTGCCAGCTGTTCCTGCAGAGCGAGGCGGCCTACGCCTGCGTCTC
CGAGTTGGGAGAACTGGGATTGGTCCAGTTCCGAGATCTCAATCCCGATG
TCAACGCTTTCCAGAGGAAGTTCGTCAACGAGGTGCGCCGCTGCGATGAG
ATGGAGCGCAAGCTGCGTTACCTGGAGAAGGAGATCAAGAAGGACGGCAT
CCCCATGTTGGACACCGGGGAGAGTCCCGAGGCCCCGCAGCCCCGCGAGA
TGATCGACCTGGAGGCCACCTTTGAGAAGCTGGAGAACGAGCTGAGGGAG
GTGAATCAGAACGCCGAGGCCCTGAAGCGCAACTTTCTGGAGCTGACCGA
GCTGAAGCATATTTTGCGCAAAACCCAAGTGTTCTTCGATGAGTCGGTGC
CCACGGTGTACAAGTCGAGTGGCGCATACTCATCCAGCAAATATCGGCGC
TATCCGCAGATGGCCGACAACCAAAACGAGGACGAGCAGGCGCAGCTGCT
GGGCGAGGAGGGTGTCCGGGCCAGCCAACCGGGCCAGAATTTGAAGCTTG
GCTTCGTGGCTGGCGTCATCCTGAGGGAGCGACTGCCGGCCTTCGAGCGG
ATGTTGTGGCGCGCCTGCAGGGGTAACGTCTTCCTGCGACAGGCGATGAT
TGAGACGCCGCTGGAGGATCCCACCAATGGCGACCAGGTGCACAAGTCCG
TGTTTATAATCTTCTTCCAGGGTGACCAGCTGAAGACGCGCGTCAAGAAG
ATCTGCGAGGGCTTCCGGGCCACGCTCTATCCTTGCCCTGAAGCTCCAGC
CGATCGGCGAGAGATGGCCATGGGTGTGATGACTCGCATCGAAGATCTGA
ACACCGTGCTCGGCCAGACGCAGGACCATCGCCATCGTGTGCTGGTCGCT
GCGGCCAAGAATCTTAAGAACTGGTTCGTCAAGGTGCGCAAGATAAAGGC
CATCTACCATACGCTGAATCTCTTCAATCTGGACGTGACCCAGAAGTGTC
TGATCGCCGAGTGCTGGGTACCGCTGCTGGACATTGAAACCATCCAGCTG
GCCTTGCGCCGCGGAACCGAAAGATCGGGATCGTCGGTGCCGCCAATTCT
CAACCGGATGCAGACGTTCGAGAATCCACCGACCTACAATCGAACGAATA
AGTTTACCAAGGCCTTTCAGGCATTGATCGATGCCTATGGCGTGGCCAGC
TATCGGGAGATGAATCCGGCACCCTACACGATCATCACCTTCCCCTTCCT
GTTCGCCGTGATGTTTGGAGATTTGGGCCACGGAGCTATCATGGCGCTCT
TTGGTCTCTGGATGATTCGAAAGGAGAAGGGACTGGCGGCTCAGAAGACG
GACAACGAGATCTGGAACATATTCTTTGGCGGACGGTACATCATCTTCCT
CATGGGCGTCTTCTCCATGTACACGGGTCTTATATACAACGATATATTCT
CCAAGTCGCTGAATATCTTTGGATCGCATTGGCACTTATCCTACAACAAG
TCCACCGTGATGGAGAACAAGTTCCTGCAGTTGAGCCCGAAAGGCGACTA
CGAGGGCGCTCCGTATCCGTTCGGCATGGATCCCATTTGGCAGGTGGCGG
GAGCCAATAAGATCATCTTCCACAACGCTTACAAGATGAAGATCTCGATC
ATTTTCGGTGTTATTCACATGATCTTCGGTGTGGTGATGAGCTGGCACAA
TCATACGTATTTCAGGAACAGGATCTCCCTGCTCTACGAGTTCATTCCCC
AGCTGGTCTTCCTGCTGCTGCTTTTCTTCTACATGGTTTTGTTGATGTTC
ATCAAGTGGATCAAGTTTGCCGCCACCAATGATAAGCCCTACTCCGAAGC
CTGTGCGCCTTCAATCCTGATCACCTTTATCGACATGGTGCTTTTTAACA
CGCCCAAGCCACCTCCGGAGAACTGTGAAACCTATATGTTCATGGGCCAG
CACTTTATCCAGGTGTTATTCGTCCTGGTTGCCGTCGGCTGCATTCCCGT
AATGTTGCTGGCCAAGCCGCTGCTCATCATGCAGGCCCGCAAGCAGGCGA
ACGTACAGCCCATTGCAGGAGCAACTTCAGATGCAGAAGCCGGCGGCGTG
TCCAATAGCGGCTCACACGGTGGTGGCGGTGGCCATGAGGAGGAAGAGGA
GCTCTCTGAGATCTTCATTCACCAGAGCATCCACACCATCGAGTACGTCC
TAGGTTCGGTATCCCACACCGCTTCCTATCTGCGATTGTGGGCGCTTTCC
TTGGCCCATGCCCAGTTGGCTGAGGTGCTGTGGACCATGGTCCTATCGAT
TGGCTTGAAGCAGGAAGGGCCGGTGGGTGGCATTGTATTGACCTGCGTGT
TTGCCTTCTGGGCCATTCTCACCGTTGGCATTCTGGTACTCATGGAGGGC
TTGTCTGCCTTCCTGCACACCCTGCGTCTCCATTGGGTCGAGTTCCAGAG
CAAGTTCTACAAGGGCCAGGGTTACGCCTTCCAACCCTTCTCGTTTGATG
CCATCATAGAAAACGGAGCTGCCGCCGCCGAGGAGTAAATAAAGCGGAAT
ATCGGTCAGAGCAACAACCAAAGCACGTTGAGAGTCTCATTGCGTTATAT
GAAATTAACTATCCAAATAAGTGGAATCTACCAGTTACAGTAACAAACAT
ATATGTACGTTTTAATGTTTAATTGTCGTGAATTTATCTATGTATGTATA
TCGTATAGCCCCAGCAAACGTTAGATTGCTAACAATATTTAATGTTCTTC
GTAGACGTTCTCCTGTTTATTAACTATACTTGTAAACTCAAATAAATAGA
AAAGGCTAACCCCTTGGGGTTGGCACCAAAAAAAAAAAAAAAAAA

LD21248.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:04:28
Subject Length Description Subject Range Query Range Score Percent Strand
Vha100-1-RC 3105 Vha100-1-RC 176..3105 1..2930 14650 100 Plus
Vha100-1.c 3103 Vha100-1.c 176..3100 1..2931 14540 99.7 Plus
Vha100-1.a 3096 Vha100-1.a 176..2710 1..2535 12675 100 Plus
Vha100-1.a 3096 Vha100-1.a 2710..3093 2548..2931 1920 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:02:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 24958131..24959286 779..1934 5705 99.6 Plus
chr3R 27901430 chr3R 24960448..24960844 2531..2927 1940 99.2 Plus
chr3R 27901430 chr3R 24959351..24959571 1935..2155 1075 99.1 Plus
chr3R 27901430 chr3R 24959945..24960155 2153..2363 1025 99.1 Plus
chr3R 27901430 chr3R 24955024..24955201 188..365 875 99.4 Plus
chr3R 27901430 chr3R 24960221..24960393 2364..2536 850 99.4 Plus
chr3R 27901430 chr3R 24956168..24956327 492..651 800 100 Plus
chr3R 27901430 chr3R 24954583..24954723 47..187 705 100 Plus
chr3R 27901430 chr3R 24955272..24955402 363..493 655 100 Plus
chr3R 27901430 chr3R 24957917..24958045 651..779 645 100 Plus
chr2L 23010047 chr2L 11740259..11740472 83..296 320 76.6 Plus
chr3R 27901430 chr3R 14217278..14217376 301..203 315 87.9 Minus
chr3R 27901430 chr3R 14214855..14214962 2590..2483 300 85.2 Minus
chr2L 23010047 chr2L 11741564..11741692 1457..1585 255 79.8 Plus
chr2R 21145070 chr2R 14796204..14796304 2558..2458 250 83.2 Minus
chr3R 27901430 chr3R 14216072..14216197 1582..1457 240 79.4 Minus
chr3R 27901430 chr3R 24954123..24954169 1..47 235 100 Plus
chr3R 27901430 chr3R 14212521..14212631 1384..1274 225 80.2 Minus
chr3R 27901430 chr3R 14216535..14216614 1119..1040 220 85 Minus
chr2R 21145070 chr2R 14797438..14797516 1384..1306 215 84.8 Minus
chr2L 23010047 chr2L 11742320..11742405 2258..2343 205 82.6 Plus
chr3R 27901430 chr3R 14216271..14216379 1383..1275 185 78 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:08:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:02:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29135262..29136417 779..1934 5780 100 Plus
3R 32079331 3R 29137579..29137979 2531..2931 1990 99.8 Plus
3R 32079331 3R 29136482..29136702 1935..2155 1105 100 Plus
3R 32079331 3R 29137076..29137286 2153..2363 1055 100 Plus
3R 32079331 3R 29132126..29132303 188..365 890 100 Plus
3R 32079331 3R 29137352..29137524 2364..2536 865 100 Plus
3R 32079331 3R 29133270..29133429 492..651 800 100 Plus
3R 32079331 3R 29131685..29131825 47..187 705 100 Plus
3R 32079331 3R 29132374..29132504 363..493 655 100 Plus
3R 32079331 3R 29135048..29135176 651..779 645 100 Plus
2L 23513712 2L 11741563..11741776 83..296 320 76.6 Plus
3R 32079331 3R 18393092..18393190 301..203 315 87.9 Minus
3R 32079331 3R 18390664..18390771 2590..2483 285 84.3 Minus
2L 23513712 2L 11742868..11742996 1457..1585 270 80.6 Plus
2R 25286936 2R 18909062..18909162 2558..2458 250 83.2 Minus
3R 32079331 3R 18392349..18392428 1119..1040 235 86.2 Minus
3R 32079331 3R 29131225..29131271 1..47 235 100 Plus
3R 32079331 3R 18391886..18392011 1582..1457 225 78.6 Minus
3R 32079331 3R 18388331..18388441 1384..1274 225 80.2 Minus
2R 25286936 2R 18910296..18910374 1384..1306 215 84.8 Minus
3R 32079331 3R 18391691..18391807 1783..1664 205 80 Minus
2L 23513712 2L 11743624..11743709 2258..2343 205 82.6 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:59:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 28876093..28877248 779..1934 5780 100 Plus
3R 31820162 3R 28878410..28878810 2531..2931 1990 99.7 Plus
3R 31820162 3R 28877313..28877533 1935..2155 1105 100 Plus
3R 31820162 3R 28877907..28878117 2153..2363 1055 100 Plus
3R 31820162 3R 28872957..28873134 188..365 890 100 Plus
3R 31820162 3R 28878183..28878355 2364..2536 865 100 Plus
3R 31820162 3R 28874101..28874260 492..651 800 100 Plus
3R 31820162 3R 28872516..28872656 47..187 705 100 Plus
3R 31820162 3R 28873205..28873335 363..493 655 100 Plus
3R 31820162 3R 28875879..28876007 651..779 645 100 Plus
2L 23513712 2L 11741563..11741776 83..296 320 76.6 Plus
3R 31820162 3R 18133923..18134021 301..203 315 87.8 Minus
3R 31820162 3R 18131495..18131602 2590..2483 285 84.2 Minus
2L 23513712 2L 11742868..11742996 1457..1585 270 80.6 Plus
2R 25260384 2R 18910261..18910361 2558..2458 250 83.1 Minus
3R 31820162 3R 18133180..18133259 1119..1040 235 86.2 Minus
3R 31820162 3R 28872056..28872102 1..47 235 100 Plus
3R 31820162 3R 18132717..18132842 1582..1457 225 78.5 Minus
3R 31820162 3R 18129162..18129272 1384..1274 225 80.1 Minus
2R 25260384 2R 18911495..18911573 1384..1306 215 84.8 Minus
2L 23513712 2L 11743624..11743709 2258..2343 205 82.5 Plus
3R 31820162 3R 18132522..18132596 1783..1709 195 84 Minus
3R 31820162 3R 18132916..18132966 1383..1333 180 90.1 Minus
2L 23513712 2L 11742728..11742801 1311..1384 175 82.4 Plus
2L 23513712 2L 11743116..11743190 1705..1779 165 81.3 Plus
3R 31820162 3R 18129025..18129093 1524..1456 150 81.1 Minus
3R 31820162 3R 18127848..18127915 2559..2492 145 80.8 Minus
Blast to na_te.dros performed 2019-03-15 22:02:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6819..6865 1899..1853 127 74.5 Minus

LD21248.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:03:06 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 24954123..24954169 1..47 100 -> Plus
chr3R 24954584..24954723 48..187 100 -> Plus
chr3R 24955024..24955200 188..364 99 -> Plus
chr3R 24955274..24955402 365..493 100 -> Plus
chr3R 24956170..24956327 494..651 100 -> Plus
chr3R 24957918..24958044 652..778 100 -> Plus
chr3R 24958131..24959286 779..1934 99 -> Plus
chr3R 24959351..24959568 1935..2152 99 -> Plus
chr3R 24959945..24960155 2153..2363 99 -> Plus
chr3R 24960221..24960392 2364..2535 99 -> Plus
chr3R 24960453..24960844 2536..2927 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:55:39 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
Vha100-1-RE 1..2568 71..2638 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:03:50 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
Vha100-1-RE 1..2568 71..2638 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:06:55 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
Vha100-1-RC 1..2568 71..2638 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:04:31 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
Vha100-1-RE 1..2568 71..2638 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:10:33 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
Vha100-1-RC 1..2568 71..2638 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:29:30 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
Vha100-1-RC 176..3102 1..2927 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:03:50 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
Vha100-1-RC 176..3102 1..2927 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:06:55 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
Vha100-1-RC 33..2959 1..2927 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:04:31 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
Vha100-1-RC 176..3102 1..2927 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:33 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
Vha100-1-RC 33..2959 1..2927 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:03:06 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29131225..29131271 1..47 100 -> Plus
3R 29131686..29131825 48..187 100 -> Plus
3R 29132126..29132302 188..364 100 -> Plus
3R 29132376..29132504 365..493 100 -> Plus
3R 29133272..29133429 494..651 100 -> Plus
3R 29135049..29135175 652..778 100 -> Plus
3R 29135262..29136417 779..1934 100 -> Plus
3R 29136482..29136699 1935..2152 100 -> Plus
3R 29137076..29137286 2153..2363 100 -> Plus
3R 29137352..29137523 2364..2535 100 -> Plus
3R 29137584..29137975 2536..2927 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:03:06 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29131225..29131271 1..47 100 -> Plus
3R 29131686..29131825 48..187 100 -> Plus
3R 29132126..29132302 188..364 100 -> Plus
3R 29132376..29132504 365..493 100 -> Plus
3R 29133272..29133429 494..651 100 -> Plus
3R 29135049..29135175 652..778 100 -> Plus
3R 29135262..29136417 779..1934 100 -> Plus
3R 29136482..29136699 1935..2152 100 -> Plus
3R 29137076..29137286 2153..2363 100 -> Plus
3R 29137352..29137523 2364..2535 100 -> Plus
3R 29137584..29137975 2536..2927 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:03:06 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29131225..29131271 1..47 100 -> Plus
3R 29131686..29131825 48..187 100 -> Plus
3R 29132126..29132302 188..364 100 -> Plus
3R 29132376..29132504 365..493 100 -> Plus
3R 29133272..29133429 494..651 100 -> Plus
3R 29135049..29135175 652..778 100 -> Plus
3R 29135262..29136417 779..1934 100 -> Plus
3R 29136482..29136699 1935..2152 100 -> Plus
3R 29137076..29137286 2153..2363 100 -> Plus
3R 29137352..29137523 2364..2535 100 -> Plus
3R 29137584..29137975 2536..2927 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:06:55 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24957408..24957547 48..187 100 -> Plus
arm_3R 24957848..24958024 188..364 100 -> Plus
arm_3R 24958098..24958226 365..493 100 -> Plus
arm_3R 24958994..24959151 494..651 100 -> Plus
arm_3R 24960771..24960897 652..778 100 -> Plus
arm_3R 24956947..24956993 1..47 100 -> Plus
arm_3R 24960984..24962139 779..1934 100 -> Plus
arm_3R 24962204..24962421 1935..2152 100 -> Plus
arm_3R 24962798..24963008 2153..2363 100 -> Plus
arm_3R 24963074..24963245 2364..2535 100 -> Plus
arm_3R 24963306..24963697 2536..2927 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:38:01 Download gff for LD21248.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28872056..28872102 1..47 100 -> Plus
3R 28872517..28872656 48..187 100 -> Plus
3R 28872957..28873133 188..364 100 -> Plus
3R 28873207..28873335 365..493 100 -> Plus
3R 28874103..28874260 494..651 100 -> Plus
3R 28875880..28876006 652..778 100 -> Plus
3R 28876093..28877248 779..1934 100 -> Plus
3R 28877313..28877530 1935..2152 100 -> Plus
3R 28877907..28878117 2153..2363 100 -> Plus
3R 28878183..28878354 2364..2535 100 -> Plus
3R 28878415..28878806 2536..2927 100   Plus

LD21248.pep Sequence

Translation from 70 to 2637

> LD21248.pep
MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK
FVNEVRRCDEMERKLRYLEKEIKKDGIPMLDTGESPEAPQPREMIDLEAT
FEKLENELREVNQNAEALKRNFLELTELKHILRKTQVFFDESVPTVYKSS
GAYSSSKYRRYPQMADNQNEDEQAQLLGEEGVRASQPGQNLKLGFVAGVI
LRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQ
GDQLKTRVKKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQT
QDHRHRVLVAAAKNLKNWFVKVRKIKAIYHTLNLFNLDVTQKCLIAECWV
PLLDIETIQLALRRGTERSGSSVPPILNRMQTFENPPTYNRTNKFTKAFQ
ALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIR
KEKGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIF
GSHWHLSYNKSTVMENKFLQLSPKGDYEGAPYPFGMDPIWQVAGANKIIF
HNAYKMKISIIFGVIHMIFGVVMSWHNHTYFRNRISLLYEFIPQLVFLLL
LFFYMVLLMFIKWIKFAATNDKPYSEACAPSILITFIDMVLFNTPKPPPE
NCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIMQARKQANVQPIAG
ATSDAEAGGVSNSGSHGGGGGHEEEEELSEIFIHQSIHTIEYVLGSVSHT
ASYLRLWALSLAHAQLAEVLWTMVLSIGLKQEGPVGGIVLTCVFAFWAIL
TVGILVLMEGLSAFLHTLRLHWVEFQSKFYKGQGYAFQPFSFDAIIENGA
AAAEE*

LD21248.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:27:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23290-PA 871 GF23290-PA 1..869 1..854 4466 95.9 Plus
Dana\GF18112-PA 835 GF18112-PA 1..830 1..847 2575 57.9 Plus
Dana\GF14569-PA 810 GF14569-PA 1..805 1..847 2399 55.9 Plus
Dana\GF18113-PA 844 GF18113-PA 15..838 3..846 2285 52 Plus
Dana\GF13738-PA 1074 GF13738-PA 516..1035 366..854 1216 46.8 Plus
Dana\GF13738-PA 1074 GF13738-PA 74..430 1..372 293 24.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:27:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11646-PA 890 GG11646-PA 1..890 1..855 4442 94.2 Plus
Dere\GG23732-PA 814 GG23732-PA 1..809 1..847 2387 56.5 Plus
Dere\GG16473-PA 751 GG16473-PA 14..745 94..846 2026 51.8 Plus
Dere\GG20932-PA 895 GG20932-PA 1..888 10..842 1388 36.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:27:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17453-PA 682 GH17453-PA 38..680 195..855 3021 85 Plus
Dgri\GH19224-PA 837 GH19224-PA 1..831 1..847 2528 57 Plus
Dgri\GH11370-PA 816 GH11370-PA 1..811 1..847 2265 54.5 Plus
Dgri\GH19225-PA 848 GH19225-PA 17..842 3..846 2248 51.4 Plus
Dgri\GH19727-PA 869 GH19727-PA 4..862 3..842 1526 38.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:09:28
Subject Length Description Subject Range Query Range Score Percent Strand
Vha100-1-PE 855 CG1709-PE 1..855 1..855 4466 100 Plus
Vha100-1-PC 855 CG1709-PC 1..855 1..855 4466 100 Plus
Vha100-1-PA 833 CG1709-PA 1..833 1..855 4319 97.4 Plus
Vha100-1-PF 833 CG1709-PF 1..833 1..855 4319 97.4 Plus
Vha100-1-PK 836 CG1709-PK 1..836 1..855 4178 94.6 Plus
Vha100-1-PD 836 CG1709-PD 1..836 1..855 4178 94.6 Plus
Vha100-1-PB 836 CG1709-PB 1..836 1..855 4178 94.6 Plus
Vha100-1-PG 850 CG1709-PG 1..850 1..855 4161 94.3 Plus
Vha100-1-PJ 852 CG1709-PJ 1..852 1..855 4148 94 Plus
Vha100-1-PI 852 CG1709-PI 1..852 1..855 4148 94 Plus
Vha100-2-PA 834 CG18617-PA 1..829 1..847 2511 57.9 Plus
Vha100-2-PB 834 CG18617-PB 1..829 1..847 2511 57.9 Plus
Vha100-5-PB 814 CG12602-PB 1..809 1..847 2392 56.6 Plus
Vha100-5-PA 814 CG12602-PA 1..809 1..847 2392 56.6 Plus
Vha100-4-PA 844 CG7678-PA 15..838 3..846 2258 52.6 Plus
Vha100-3-PA 904 CG30329-PA 13..897 3..842 1394 37 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:27:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22777-PA 892 GI22777-PA 1..890 1..854 3955 85.4 Plus
Dmoj\GI24258-PA 835 GI24258-PA 1..830 1..847 2535 57 Plus
Dmoj\GI18075-PA 818 GI18075-PA 1..816 1..850 2318 54.3 Plus
Dmoj\GI24259-PA 847 GI24259-PA 17..841 3..846 2262 51.5 Plus
Dmoj\GI20149-PA 870 GI20149-PA 4..863 5..842 1476 37.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:27:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23912-PA 868 GL23912-PA 1..868 1..855 4025 88.4 Plus
Dper\GL23189-PA 834 GL23189-PA 1..829 1..847 2530 57.6 Plus
Dper\GL24346-PA 842 GL24346-PA 15..836 3..846 2353 52.8 Plus
Dper\GL19314-PA 819 GL19314-PA 1..819 1..852 2351 55.7 Plus
Dper\GL10577-PA 901 GL10577-PA 4..896 3..844 1477 38.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:27:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14320-PD 855 GA14320-PD 1..855 1..855 4231 94.7 Plus
Dpse\GA14320-PF 833 GA14320-PF 1..833 1..855 4125 93 Plus
Dpse\GA14320-PC 836 GA14320-PC 1..836 1..855 3992 90.2 Plus
Dpse\GA14320-PE 850 GA14320-PE 1..850 1..855 3970 89.9 Plus
Dpse\GA14320-PH 852 GA14320-PH 1..852 1..855 3956 89.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:27:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12768-PA 890 GM12768-PA 1..890 1..855 4475 94.6 Plus
Dsec\GM18705-PA 834 GM18705-PA 1..829 1..847 2570 57.9 Plus
Dsec\GM19181-PA 814 GM19181-PA 1..809 1..847 2366 55.7 Plus
Dsec\GM18706-PA 1538 GM18706-PA 14..627 2..644 1774 52.4 Plus
Dsec\GM19860-PA 904 GM19860-PA 13..897 3..842 1450 37.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:27:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20170-PA 816 GD20170-PA 1..811 1..847 2578 58.3 Plus
Dsim\GD21418-PA 342 GD21418-PA 1..342 514..855 1805 98.8 Plus
Dsim\GD21417-PA 355 GD21417-PA 38..348 195..505 1694 100 Plus
Dsim\GD23787-PA 634 GD23787-PA 88..629 273..847 1348 52.1 Plus
Dsim\GD20171-PA 580 GD20171-PA 113..574 392..846 1345 56.4 Plus
Dsim\GD23787-PA 634 GD23787-PA 1..197 1..218 500 47.7 Plus
Dsim\GD20171-PA 580 GD20171-PA 15..113 3..100 319 59.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:27:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22780-PA 869 GJ22780-PA 14..867 18..855 3847 83.4 Plus
Dvir\GJ10832-PA 836 GJ10832-PA 1..831 1..847 2536 56.9 Plus
Dvir\GJ16665-PA 818 GJ16665-PA 1..814 1..848 2342 55.4 Plus
Dvir\GJ10833-PA 851 GJ10833-PA 17..845 3..846 2305 51.6 Plus
Dvir\GJ22427-PA 870 GJ22427-PA 19..863 20..842 1485 39.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:27:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11891-PA 894 GK11891-PA 1..892 1..855 3977 86.8 Plus
Dwil\GK11490-PA 833 GK11490-PA 1..828 1..847 2551 57.3 Plus
Dwil\GK11491-PA 850 GK11491-PA 22..844 3..846 2364 52.4 Plus
Dwil\GK24362-PA 759 GK24362-PA 1..755 61..847 2150 55.4 Plus
Dwil\GK20688-PA 873 GK20688-PA 1..866 10..842 1512 37.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23836-PA 888 GE23836-PA 1..888 1..855 4080 90.3 Plus
Dyak\GE25199-PA 834 GE25199-PA 1..829 1..847 2572 57.9 Plus
Dyak\GE18538-PA 814 GE18538-PA 1..809 1..847 2419 56.4 Plus
Dyak\GE25200-PA 841 GE25200-PA 12..835 3..846 2312 52.3 Plus
Dyak\GE13869-PA 911 GE13869-PA 13..904 3..842 1444 37.6 Plus

LD21248.hyp Sequence

Translation from 70 to 2637

> LD21248.hyp
MGSLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK
FVNEVRRCDEMERKLRYLEKEIKKDGIPMLDTGESPEAPQPREMIDLEAT
FEKLENELREVNQNAEALKRNFLELTELKHILRKTQVFFDESVPTVYKSS
GAYSSSKYRRYPQMADNQNEDEQAQLLGEEGVRASQPGQNLKLGFVAGVI
LRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQ
GDQLKTRVKKICEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQT
QDHRHRVLVAAAKNLKNWFVKVRKIKAIYHTLNLFNLDVTQKCLIAECWV
PLLDIETIQLALRRGTERSGSSVPPILNRMQTFENPPTYNRTNKFTKAFQ
ALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIR
KEKGLAAQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIF
GSHWHLSYNKSTVMENKFLQLSPKGDYEGAPYPFGMDPIWQVAGANKIIF
HNAYKMKISIIFGVIHMIFGVVMSWHNHTYFRNRISLLYEFIPQLVFLLL
LFFYMVLLMFIKWIKFAATNDKPYSEACAPSILITFIDMVLFNTPKPPPE
NCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIMQARKQANVQPIAG
ATSDAEAGGVSNSGSHGGGGGHEEEEELSEIFIHQSIHTIEYVLGSVSHT
ASYLRLWALSLAHAQLAEVLWTMVLSIGLKQEGPVGGIVLTCVFAFWAIL
TVGILVLMEGLSAFLHTLRLHWVEFQSKFYKGQGYAFQPFSFDAIIENGA
AAAEE*

LD21248.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:15:28
Subject Length Description Subject Range Query Range Score Percent Strand
Vha100-1-PE 855 CG1709-PE 1..855 1..855 4466 100 Plus
Vha100-1-PC 855 CG1709-PC 1..855 1..855 4466 100 Plus
Vha100-1-PA 833 CG1709-PA 1..833 1..855 4319 97.4 Plus
Vha100-1-PF 833 CG1709-PF 1..833 1..855 4319 97.4 Plus
Vha100-1-PK 836 CG1709-PK 1..836 1..855 4178 94.6 Plus