BDGP Sequence Production Resources |
Search the DGRC for LD21289
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 212 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | Df31-RA |
Protein status: | LD21289.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 833 |
Gene | Date | Evidence |
---|---|---|
CG2207 | 2001-01-01 | Release 2 assignment |
CG2207 | 2001-07-04 | Blastp of sequenced clone |
CG2207 | 2003-01-01 | Sim4 clustering to Release 3 |
Df31 | 2008-04-29 | Release 5.5 accounting |
Df31 | 2008-08-15 | Release 5.9 accounting |
Df31 | 2008-12-18 | 5.12 accounting |
833 bp (833 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051664
> LD21289.complete GACGTTCTTAATTGTACGGCAAAATCTCCAGCAACCAAGCTACTTTCTTA GCAAAGCTACTAAAGAGGAAACTATATTGATAAAATTTCGTTCTTTTAAA ATCTTTGTGCTGATATTTAAGGCGTGCTTGGTGATCCAAAAACCCTCAGT TACAACGTGTTTTCTCGCTTCGCGTTTGAAAAGTAATATCTAACAGTAAT TCAAAATGGCTGATGTGGCTGAGCAAAAGAATGAGACCCCTGTTGTCGAG AAGGTCGCAGCTGAGGAAGTTGATGCTGTGAAGAAAGATGCAGTTGCCGC CGAGGAGGTAGCAGCTGAGAAGGCGAGCATCACAGAAAACGGTGGCGCCG AAGAGGAGAGCGTAGCCAAGGAGAACGGAGCCGCCGACAGCAGCGCGACC GAGCCCACCGACGCAGTCGATGGTGAAAAGGCGTCTGAGCCCACTGTTTC TTTTGCCGCCGATAAGGATGAGAAGAAGGACGAGGATAAAAAAGAGGATT CCGCTGCCGATGGGGAGGACACCAAAAAAGAGAGCAGCGAAGCTGTTCTA CCTGCTGTCGAGAATGGCTCCGAGGAGGTCACCAACGGTGACTCAACAGA TGCTCCCGCCATTGAGGCTGTAAAGCGGAAGGTGGATGAGGCTGCAGCCA AGGCAGATGAGGCCGTCGCCACGCCGGAGAAAAAGGCTAAGCTTGATGAG GCCAGCACAAAGGATGAGGTTCAGAATGGGGCCGAGGCTAGCGAAGTGGC CGCCTAAGGGAATCGCCCGCGGAGCAGCAAACTCAGTAATCTACTTATTA AATACTTACTAACACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 21626344..21626711 | 599..232 | 1840 | 100 | Minus |
chr2L | 23010047 | chr2L | 21628171..21628401 | 231..1 | 1155 | 100 | Minus |
chr2L | 23010047 | chr2L | 21626035..21626254 | 815..596 | 1100 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21627842..21628209 | 599..232 | 1840 | 100 | Minus |
2L | 23513712 | 2L | 21629667..21629897 | 231..1 | 1155 | 100 | Minus |
2L | 23513712 | 2L | 21627535..21627761 | 822..596 | 1135 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21627842..21628209 | 599..232 | 1840 | 100 | Minus |
2L | 23513712 | 2L | 21629667..21629897 | 231..1 | 1155 | 100 | Minus |
2L | 23513712 | 2L | 21627535..21627761 | 822..596 | 1135 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 21626035..21626250 | 600..815 | 100 | <- | Minus |
chr2L | 21626344..21626711 | 232..599 | 100 | <- | Minus |
chr2L | 21628171..21628401 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Df31-RB | 1..552 | 206..757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Df31-RB | 1..552 | 206..757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Df31-RF | 1..552 | 206..757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Df31-RB | 1..552 | 206..757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Df31-RF | 1..552 | 206..757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Df31-RA | 32..846 | 1..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Df31-RA | 32..846 | 1..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Df31-RF | 36..850 | 1..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Df31-RA | 32..846 | 1..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Df31-RF | 36..850 | 1..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21627542..21627757 | 600..815 | 100 | <- | Minus |
2L | 21627842..21628209 | 232..599 | 100 | <- | Minus |
2L | 21629667..21629897 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21627542..21627757 | 600..815 | 100 | <- | Minus |
2L | 21627842..21628209 | 232..599 | 100 | <- | Minus |
2L | 21629667..21629897 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21627542..21627757 | 600..815 | 100 | <- | Minus |
2L | 21627842..21628209 | 232..599 | 100 | <- | Minus |
2L | 21629667..21629897 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 21627542..21627757 | 600..815 | 100 | <- | Minus |
arm_2L | 21627842..21628209 | 232..599 | 100 | <- | Minus |
arm_2L | 21629667..21629897 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21627542..21627757 | 600..815 | 100 | <- | Minus |
2L | 21627842..21628209 | 232..599 | 100 | <- | Minus |
2L | 21629667..21629897 | 1..231 | 100 | Minus |
Translation from 205 to 756
> LD21289.hyp MADVAEQKNETPVVEKVAAEEVDAVKKDAVAAEEVAAEKASITENGGAEE ESVAKENGAADSSATEPTDAVDGEKASEPTVSFAADKDEKKDEDKKEDSA ADGEDTKKESSEAVLPAVENGSEEVTNGDSTDAPAIEAVKRKVDEAAAKA DEAVATPEKKAKLDEASTKDEVQNGAEASEVAA*
Translation from 205 to 756
> LD21289.pep MADVAEQKNETPVVEKVAAEEVDAVKKDAVAAEEVAAEKASITENGGAEE ESVAKENGAADSSATEPTDAVDGEKASEPTVSFAADKDEKKDEDKKEDSA ADGEDTKKESSEAVLPAVENGSEEVTNGDSTDAPAIEAVKRKVDEAAAKA DEAVATPEKKAKLDEASTKDEVQNGAEASEVAA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14424-PA | 168 | GF14424-PA | 1..168 | 1..183 | 356 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21483-PA | 184 | GG21483-PA | 1..184 | 1..183 | 643 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10947-PA | 199 | GH10947-PA | 1..199 | 1..183 | 284 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Df31-PB | 183 | CG2207-PB | 1..183 | 1..183 | 886 | 100 | Plus |
Df31-PA | 183 | CG2207-PA | 1..183 | 1..183 | 886 | 100 | Plus |
Df31-PF | 183 | CG2207-PF | 1..183 | 1..183 | 886 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12144-PA | 180 | GI12144-PA | 1..180 | 1..183 | 340 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25953-PA | 182 | GL25953-PA | 1..182 | 1..183 | 412 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15302-PA | 182 | GA15302-PA | 1..182 | 1..183 | 407 | 69.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16132-PA | 183 | GM16132-PA | 1..183 | 1..183 | 684 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21634-PA | 183 | GD21634-PA | 1..183 | 1..183 | 636 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14182-PA | 128 | GJ14182-PA | 1..128 | 1..183 | 279 | 53.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24871-PA | 187 | GK24871-PA | 1..187 | 1..183 | 246 | 62.4 | Plus |
Dwil\GK23384-PA | 187 | GK23384-PA | 1..187 | 1..183 | 244 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Df31-PA | 184 | GE12984-PA | 1..184 | 1..183 | 606 | 85.4 | Plus |