BDGP Sequence Production Resources |
Search the DGRC for LD21311
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 213 |
Well: | 11 |
Vector: | pOT2 |
Associated Gene/Transcript | yki-RD |
Protein status: | LD21311.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1275 |
Gene | Date | Evidence |
---|---|---|
CG4005 | 2001-01-01 | Release 2 assignment |
CG4005 | 2001-09-19 | Blastp of sequenced clone |
CG4005 | 2003-01-01 | Sim4 clustering to Release 3 |
yki | 2008-04-29 | Release 5.5 accounting |
yki | 2008-08-15 | Release 5.9 accounting |
yki | 2008-12-18 | 5.12 accounting |
1275 bp (1275 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058506
> LD21311.complete AACACCTTAATGTTATAGTTTCGCGCAGCGCGATGGAGTGATACGTATAT GGAAGAACATATATGTGCGCGTGCCTAATCGCTAAGATAATTCTATGTAG TTTTCGTTTGTATACAATAAGTGCCTTTTATATGTTAACGACGATGTCAG CCAGCAGCAATACAAACAGCCTGATCGAGAAGGAGATCGACGACGAGGAC ATGCTTTCGCCGATCAAGTCCAACAACCTGGTGGTGCGGGTCAACCAGGA CACGGACGACAACCTGCAGGCGCTATTCGACAGCGTCCTGAATCCGGGTG ACGCCAAGCGCCCGCTGCAGCTGCCCCTGCGCATGCGGAAGCTGCCCAAC TCCTTCTTCACGCCCCCGGCGCCCTCGCACTCGCGGGCCAACAGCGCCGA CTCCACCTACGACGCGGGCTCCCAGTCGAGCATCAACATCGGGAACAAGG CGTCCATCGTCCAGCAGCCAGATGGCCAGTCGCCCATCGCCGCCATCCCC CAGCTCCAGATTCAGCCGTCTCCCCAGCACAGCCGCCTGGCGATACATCA CTCCCGAGCCCGCAGCAGCCCCGCCTCGCTGCAGCAGAACTACAATGTGC GCGCCCGGAGCGACGCAGCAGCAGCCAACAATCCGAATGCCAATCCGAGC AGCCAACAGCAGCCCGCTGGGCCCACTTTCCCAGAGAACAGTGCCCAAGA GTTCCCCAGCGGCGCCCCGGCCAGCTCGGCCATTGATCTGGACGCCATGA ACACCTGCATGTCGCAGGACATTCCCATGTCCATGCAGACAGTGCACAAG AAGCAGCGCTCCTACGACGTCATCAGCCCCATTCAGTTGAACCGCCAACT AGGCGCCTTGCCGCCGGGATGGGAGCAAGCCAAGACCAATGATGGCCAGA TCTACTACTTGAATCATACTACAAAATCTACGCAGTGGGAGGATCCCAGA ATCCAATATCGCCAGCAGCAGCAAATCTTGATGGCCGAGCGAATAAAGCA GAATGAATCTGGGCTTAGCGTGCTCGACTGCCCAGATAACTTAGTGTCTT CCCTCCAGATTGAGGATAATCTTTGCAGTAACTTGTTCAATGACGCACAG GCCATTGTAAATCCGCCGTCTTCCCACAAACCTGACGATTTGGAATGGTA TAAAATTAATTAATTCAATGTATACATCTGTATTAGACCTAAAAGTTTTA TATTTTGTATTATTCTAAATTAAATATTTTTCAAATTTTATAGTATTTCT TTACATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yki-RD | 1523 | yki-RD | 183..1441 | 1..1259 | 6295 | 100 | Plus |
yki.f | 1679 | yki.f | 183..1188 | 1..1006 | 5030 | 100 | Plus |
yki-RF | 1679 | yki-RF | 183..1188 | 1..1006 | 5030 | 100 | Plus |
yki.f | 1679 | yki.f | 1344..1597 | 1006..1259 | 1270 | 100 | Plus |
yki-RF | 1679 | yki-RF | 1344..1597 | 1006..1259 | 1270 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19953482..19954394 | 913..1 | 4550 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 19951997..19952197 | 1256..1056 | 1005 | 100 | Minus |
chr2R | 21145070 | chr2R | 19953180..19953271 | 1005..914 | 460 | 100 | Minus |
chr2R | 21145070 | chr2R | 19952278..19952331 | 1058..1005 | 270 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24067465..24068377 | 913..1 | 4565 | 100 | Minus |
2R | 25286936 | 2R | 24065977..24066180 | 1259..1056 | 1020 | 100 | Minus |
2R | 25286936 | 2R | 24067163..24067254 | 1005..914 | 460 | 100 | Minus |
2R | 25286936 | 2R | 24066261..24066314 | 1058..1005 | 270 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24068664..24069576 | 913..1 | 4565 | 100 | Minus |
2R | 25260384 | 2R | 24067176..24067379 | 1259..1056 | 1020 | 100 | Minus |
2R | 25260384 | 2R | 24068362..24068453 | 1005..914 | 460 | 100 | Minus |
2R | 25260384 | 2R | 24067460..24067513 | 1058..1005 | 270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19952278..19952330 | 1006..1058 | 100 | <- | Minus |
chr2R | 19953180..19953271 | 914..1005 | 100 | <- | Minus |
chr2R | 19953482..19954394 | 1..913 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yki-RD | 1..1032 | 132..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yki-RD | 1..1032 | 132..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yki-RD | 1..1032 | 132..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yki-RD | 1..1032 | 132..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yki-RD | 1..1032 | 132..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yki-RD | 109..1364 | 1..1256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yki-RD | 109..1364 | 1..1256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yki-RD | 109..1364 | 1..1256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yki-RD | 109..1364 | 1..1256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yki-RD | 109..1364 | 1..1256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24065980..24066177 | 1059..1256 | 100 | <- | Minus |
2R | 24066261..24066313 | 1006..1058 | 100 | <- | Minus |
2R | 24067163..24067254 | 914..1005 | 100 | <- | Minus |
2R | 24067465..24068377 | 1..913 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24065980..24066177 | 1059..1256 | 100 | <- | Minus |
2R | 24066261..24066313 | 1006..1058 | 100 | <- | Minus |
2R | 24067163..24067254 | 914..1005 | 100 | <- | Minus |
2R | 24067465..24068377 | 1..913 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24065980..24066177 | 1059..1256 | 100 | <- | Minus |
2R | 24066261..24066313 | 1006..1058 | 100 | <- | Minus |
2R | 24067163..24067254 | 914..1005 | 100 | <- | Minus |
2R | 24067465..24068377 | 1..913 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19953503..19953700 | 1059..1256 | 100 | <- | Minus |
arm_2R | 19953784..19953836 | 1006..1058 | 100 | <- | Minus |
arm_2R | 19954686..19954777 | 914..1005 | 100 | <- | Minus |
arm_2R | 19954988..19955900 | 1..913 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24067197..24067394 | 1059..1256 | 100 | <- | Minus |
2R | 24067478..24067530 | 1006..1058 | 100 | <- | Minus |
2R | 24068380..24068471 | 914..1005 | 100 | <- | Minus |
2R | 24068682..24069594 | 1..913 | 100 | Minus |
Translation from 62 to 1162
> LD21311.pep MCACLIAKIILCSFRLYTISAFYMLTTMSASSNTNSLIEKEIDDEDMLSP IKSNNLVVRVNQDTDDNLQALFDSVLNPGDAKRPLQLPLRMRKLPNSFFT PPAPSHSRANSADSTYDAGSQSSINIGNKASIVQQPDGQSPIAAIPQLQI QPSPQHSRLAIHHSRARSSPASLQQNYNVRARSDAAAANNPNANPSSQQQ PAGPTFPENSAQEFPSGAPASSAIDLDAMNTCMSQDIPMSMQTVHKKQRS YDVISPIQLNRQLGALPPGWEQAKTNDGQIYYLNHTTKSTQWEDPRIQYR QQQQILMAERIKQNESGLSVLDCPDNLVSSLQIEDNLCSNLFNDAQAIVN PPSSHKPDDLEWYKIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13481-PA | 342 | GF13481-PA | 2..342 | 30..366 | 1290 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19955-PA | 418 | GG19955-PA | 1..418 | 1..366 | 1867 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20170-PA | 330 | GH20170-PA | 5..330 | 33..366 | 1049 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yki-PH | 418 | CG4005-PH | 1..418 | 1..366 | 1833 | 87.3 | Plus |
yki-PD | 343 | CG4005-PD | 1..343 | 24..366 | 1778 | 100 | Plus |
yki-PF | 395 | CG4005-PF | 1..395 | 24..366 | 1712 | 86.6 | Plus |
yki-PG | 395 | CG4005-PG | 1..395 | 24..366 | 1712 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18856-PA | 323 | GI18856-PA | 4..323 | 32..366 | 1086 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10424-PA | 317 | GL10424-PA | 2..317 | 30..366 | 1281 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17846-PA | 317 | GA17846-PA | 2..317 | 30..366 | 1283 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18275-PA | 391 | GM18275-PA | 1..391 | 28..366 | 1712 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24973-PA | 366 | GD24973-PA | 1..366 | 1..366 | 1934 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20440-PA | 312 | GJ20440-PA | 4..312 | 32..366 | 1080 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21386-PA | 391 | GK21386-PA | 1..391 | 24..366 | 1080 | 60.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11487-PA | 418 | GE11487-PA | 1..418 | 1..366 | 1843 | 86.4 | Plus |
Translation from 62 to 1162
> LD21311.hyp MCACLIAKIILCSFRLYTISAFYMLTTMSASSNTNSLIEKEIDDEDMLSP IKSNNLVVRVNQDTDDNLQALFDSVLNPGDAKRPLQLPLRMRKLPNSFFT PPAPSHSRANSADSTYDAGSQSSINIGNKASIVQQPDGQSPIAAIPQLQI QPSPQHSRLAIHHSRARSSPASLQQNYNVRARSDAAAANNPNANPSSQQQ PAGPTFPENSAQEFPSGAPASSAIDLDAMNTCMSQDIPMSMQTVHKKQRS YDVISPIQLNRQLGALPPGWEQAKTNDGQIYYLNHTTKSTQWEDPRIQYR QQQQILMAERIKQNESGLSVLDCPDNLVSSLQIEDNLCSNLFNDAQAIVN PPSSHKPDDLEWYKIN*