BDGP Sequence Production Resources |
Search the DGRC for LD21347
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 213 |
Well: | 47 |
Vector: | pOT2 |
Associated Gene/Transcript | beag-RA |
Protein status: | LD21347.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1878 |
Gene | Date | Evidence |
---|---|---|
CG18005 | 2001-01-01 | Release 2 assignment |
CG18005 | 2001-11-29 | Blastp of sequenced clone |
CG18005 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18005 | 2008-04-29 | Release 5.5 accounting |
CG18005 | 2008-08-15 | Release 5.9 accounting |
CG18005 | 2008-12-18 | 5.12 accounting |
1878 bp (1878 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069471
> LD21347.complete TGTAAATATAGATTTTCTCTGCGAGTTTTCTTCGAATTTTCTTCGCCATG TCGGATGCCCACTTGGAAGCACCGCCTTCGGTGCGACTAACCAACGATGA CTTCCGCAAGCTGCTAGCGACGCCCCGAGCTCCTCCTCCTGGCTCCGGGA CGAGCAGCACCTCCGCTGGAGGATCTCTGGCCACTGCTACCTTTGCCACG CCCTCCACCGCCCCCGGCACGACAGGATTGAGTGGCGAAAAGAAGAAGGG TCAGAGCAGCAGCGAGCGGAATGATCTGCGTCGCAAGAAAAAGAACTTCT ATGCGGCGCTCAAGAAGCAGGAGGATGTGAAGCTGCAAGAGCTGTCCGAG AAGTACAGGGACCGAGCACGAGAACGACGCGATGGTGCCAATCCAGATTA CGTGAACGTGAGCACGCCGGGACACGGAAGCAGCACCAATGCGTATCGAG CTGTAGCGCCAGATATGAAATCCGGAATCGATGCCCAGGAGCGAAGAAGA CGTATCATTCAGGAGTCCAAGTTCTTGGGTGGAGACATCCAGCATACGCA TTTGGTGAAGGGTCTTGATTACGCCCTTCTGCAAAAAGTGCGCTCCGAGC TGCACTCGAAGGAAGCGGAAGAGGAGGAGATTGCCGCCGCTGTGGCAAGG GAAAAGCTCGCCGAAGCAGCTGCCGCCGCTGAGCAATTGGAAGCGGAACG CCGCGAGTCGGAGGATATTAATGCAATCAATGGTGCACTAGCGCGCAATA TTTACAATCTAGTGCAGGCAAGGCGTTCGAAAGAAGTTCCCCGCAATGAG CTATTTGCTCCAGGACGGATGGCCTATGTGATCGACCTGGATGACGAGCT AGGGGAGTCGGATATTCCAACCACACTGAAGCGCTCCAAGTTCGAGGTGC CGGTGTCACAAGAGGATGTTGCCACGCTGACCACCAATGACATTGTGATC AACAAGCTGTCCCAAATCCTGAGCTATCTACGTGCCGGTGGTCGCAACAA GAAGAACAAAAAGCGCGACAAGGACAAACCGCTGTTCTACGAAAAGGAGG TGGAAAATCTTCGTGGGTCGTCTAGCAATGGTGGCTCCAGTCGGCACGCC ACCTCGTCCTCATCGAACATGGGAGGGAAATCAGCTCCCTTGGGCGATAA TATCTACGACGATATAGGGGACTACCAACCTTCTGCCACGCGACCTGAGC GAAACCGCCAGGAGCAAGGCAAGTCCGCCCCGTCCTACTTTGGAGACGGC CCGCCGGAGGCATCAGAGGAGCCGATAATATCCAGTATTCCCCCGCCACC CAAGATATCGAAGGCCATGGCCGCACGGTTCGCTGAACCCGAGGGATACG CAGAATGCTATCCCGGGCTGGAGGAGATGAACGACGCCATCGACGACTCG GACGATGAGGTGGATTACACCAAGATGGATTTGGGCAATAAAAAGGGGCC CATTGGACGCTGGGACTTTGACACGCAGGAGGAGTACTCCGACTACATGA GCACGAAGGAGGCGCTGCCCAAGGCAGCCTTCCAGTACGGGGTCAAGATG CAGGACGGTCGCAAGACGCGCAAGAACAAGACGGAGAAGAACGAGAAGGC CGAGCTCGATAGGGAGTGGCAAAAGATTCAGACAATCATTCAAAAGCGAA AACTGCCAAAGGACGGTGGAGGCGGCGGTGCTGGTGGCGATGAACCCGAT TACAAATCCGCAAAGTACTAGAAATTCTTGAAACATTATTCTATATTTGT AATGTAATTCTGTAAAACATTAAATATAAGTATGCTCGTACTTGTATTAA TCTTACATGCTCTCAAATATATTTTAGCAACGTTATCACTAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18005-RA | 1977 | CG18005-RA | 116..1957 | 1..1842 | 9210 | 100 | Plus |
CG11033-RB | 5331 | CG11033-RB | 5188..5331 | 1842..1699 | 720 | 100 | Minus |
CG11033.a | 5190 | CG11033.a | 5075..5190 | 1842..1727 | 580 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4889031..4889239 | 1632..1840 | 100 | <- | Minus |
chr3R | 4889305..4890935 | 1..1631 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18005-RA | 1..1674 | 48..1721 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18005-RA | 1..1674 | 48..1721 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
beag-RA | 1..1674 | 48..1721 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18005-RA | 1..1674 | 48..1721 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
beag-RA | 1..1674 | 48..1721 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18005-RA | 62..1901 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18005-RA | 62..1901 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
beag-RA | 43..1882 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18005-RA | 62..1901 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
beag-RA | 43..1882 | 1..1840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9063132..9063340 | 1632..1840 | 100 | <- | Minus |
3R | 9063406..9065036 | 1..1631 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9063132..9063340 | 1632..1840 | 100 | <- | Minus |
3R | 9063406..9065036 | 1..1631 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9063132..9063340 | 1632..1840 | 100 | <- | Minus |
3R | 9063406..9065036 | 1..1631 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4888854..4889062 | 1632..1840 | 100 | <- | Minus |
arm_3R | 4889128..4890758 | 1..1631 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8803963..8804171 | 1632..1840 | 100 | <- | Minus |
3R | 8804237..8805867 | 1..1631 | 100 | Minus |
Translation from 47 to 1720
> LD21347.pep MSDAHLEAPPSVRLTNDDFRKLLATPRAPPPGSGTSSTSAGGSLATATFA TPSTAPGTTGLSGEKKKGQSSSERNDLRRKKKNFYAALKKQEDVKLQELS EKYRDRARERRDGANPDYVNVSTPGHGSSTNAYRAVAPDMKSGIDAQERR RRIIQESKFLGGDIQHTHLVKGLDYALLQKVRSELHSKEAEEEEIAAAVA REKLAEAAAAAEQLEAERRESEDINAINGALARNIYNLVQARRSKEVPRN ELFAPGRMAYVIDLDDELGESDIPTTLKRSKFEVPVSQEDVATLTTNDIV INKLSQILSYLRAGGRNKKNKKRDKDKPLFYEKEVENLRGSSSNGGSSRH ATSSSSNMGGKSAPLGDNIYDDIGDYQPSATRPERNRQEQGKSAPSYFGD GPPEASEEPIISSIPPPPKISKAMAARFAEPEGYAECYPGLEEMNDAIDD SDDEVDYTKMDLGNKKGPIGRWDFDTQEEYSDYMSTKEALPKAAFQYGVK MQDGRKTRKNKTEKNEKAELDREWQKIQTIIQKRKLPKDGGGGGAGGDEP DYKSAKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18429-PA | 555 | GF18429-PA | 1..555 | 1..557 | 2185 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17395-PA | 558 | GG17395-PA | 1..558 | 1..557 | 2873 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18236-PA | 584 | GH18236-PA | 1..584 | 1..557 | 1976 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
beag-PA | 557 | CG18005-PA | 1..557 | 1..557 | 2864 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10192-PA | 541 | GI10192-PA | 1..541 | 1..557 | 2063 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21550-PA | 558 | GL21550-PA | 1..558 | 1..557 | 2111 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14763-PA | 558 | GA14763-PA | 1..558 | 1..557 | 2103 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26285-PA | 557 | GM26285-PA | 1..557 | 1..557 | 2889 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20821-PA | 557 | GD20821-PA | 1..557 | 1..557 | 2884 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23479-PA | 299 | GJ23479-PA | 1..294 | 1..303 | 1114 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11519-PA | 560 | GK11519-PA | 1..560 | 1..557 | 2141 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24799-PA | 554 | GE24799-PA | 1..554 | 1..557 | 2853 | 97.8 | Plus |
Translation from 47 to 1720
> LD21347.hyp MSDAHLEAPPSVRLTNDDFRKLLATPRAPPPGSGTSSTSAGGSLATATFA TPSTAPGTTGLSGEKKKGQSSSERNDLRRKKKNFYAALKKQEDVKLQELS EKYRDRARERRDGANPDYVNVSTPGHGSSTNAYRAVAPDMKSGIDAQERR RRIIQESKFLGGDIQHTHLVKGLDYALLQKVRSELHSKEAEEEEIAAAVA REKLAEAAAAAEQLEAERRESEDINAINGALARNIYNLVQARRSKEVPRN ELFAPGRMAYVIDLDDELGESDIPTTLKRSKFEVPVSQEDVATLTTNDIV INKLSQILSYLRAGGRNKKNKKRDKDKPLFYEKEVENLRGSSSNGGSSRH ATSSSSNMGGKSAPLGDNIYDDIGDYQPSATRPERNRQEQGKSAPSYFGD GPPEASEEPIISSIPPPPKISKAMAARFAEPEGYAECYPGLEEMNDAIDD SDDEVDYTKMDLGNKKGPIGRWDFDTQEEYSDYMSTKEALPKAAFQYGVK MQDGRKTRKNKTEKNEKAELDREWQKIQTIIQKRKLPKDGGGGGAGGDEP DYKSAKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
beag-PA | 557 | CG18005-PA | 1..557 | 1..557 | 2864 | 100 | Plus |