BDGP Sequence Production Resources |
Search the DGRC for LD21403
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 214 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8920-RA |
Protein status: | LD21403.pep: gold |
Preliminary Size: | 4716 |
Sequenced Size: | 3089 |
Gene | Date | Evidence |
---|---|---|
CG8920 | 2000-02-14 | Blastp of sequenced clone |
CG8920 | 2001-01-01 | Release 2 assignment |
CG8920 | 2008-04-29 | Release 5.5 accounting |
CG8920 | 2008-08-15 | Release 5.9 accounting |
CG8920 | 2008-12-18 | 5.12 accounting |
3089 bp (3089 high quality bases) assembled on 2000-02-14
GenBank Submission: AF132168
> LD21403.complete TGAGCCGCTGCTGCTGCGCTGCTACCTTACCGCTTCACTCTGTGTGACCG ACCGCTCGACGGACCGTTCCCGCCCGCTCTCTCCGTCGAAAAGGGGCCGC CCGCCGCTGAAGGGGCAACGTGTCAACGGCGTCTTCTTCTTTTCATCTGC GCCGTGAAAAGTGTGTTCATCACAGCGAAGTATAACGCTAACACAGAACA TATTGTGCGTATGGTACGTCAGCAGAAGACCAGCAAGTCCACAAGCTTAT CGAAGCCCACTCCAATTGCCCAGAAGCCCAAGCCAATTGCCCAGAAGCAC ACTCACGGCAATAAGTACCACTACCAGCAACGGAATAAGCAGCCGAATCA TCAGCCGGATCAAGAAATAGGAAGAGCAGCTAAGTGTGAGAATCAGGCTA TAGCCGAGCATAAACAAGATCTAACGGGCATCATAACCCAAGAGCTGTTT GAAAGTTTCAATAATATTCAAGGTCCGTTTTCGGAAAACCTGCAGGTTTT CAACAAAAATCCAGAATATATCACAAGGCGAAAGAAAGAGCTTAAGAAAG AAGACGATCTAGATCGTGGTCAAATAACGAAGGAAGTCGCTAGGGAAAAA CAGAAGGAAAAAGAAACCCGCGATCGGGCTGTGACGGAAACGATCTTCGT AACAATTGAGAACAAAAAGGCACCAGTCATGAATGGACATGGACCAAGGC ACGTTAAAGTGGCTAACGGACAAGACAAACACAATGACGGCAAACCTCCG CTGCGTGCCATACTGGGCAACAGTGCTTCGCAGCGCCAGCAAGATACAAG CACCGTCTATCACAGCCCTGAATCCTCATTCAAGCGGCCACGTCATCCGC GAGTAATGTACCCTGGTCACCAGCGCACCACGGGCGTCTCTGTGAATCAC AGATTGAAAGTAACGCCGCAATCGGATGCACCCACGCCAGCGGTAGCGCC CATCACGCCGCCAGCTTCGCCGGAATACGCTCAAACGACAACCGCCGCTA AAGCGACGTACAAAGAAGATATCCACGGAGGTCAAGGTGAAACAGGCAAT GTCGTTACAAATCCAAAAGTTAAGGTGCCACTTAAATTCGATCCCTCACT TGATCCCGTCTCCACGCTCAACTTCTATTGCGCGGCAAATGACTTTGAGA AACCTGCATACAACATATTCAACAAGCTACGGAACCTACATTGTTCAGTG CAAATCGCTGGCGATGTTTACAGTAGCTATCCGCAGGAGTTCACCGATAA GGAGACAGCATACCAACGCACAGCACAGATCGCCATCCAGCGCATCATGC ATGCCCAGTCACACCAAAAGCTTTCTGCTTGCACATTTAGCGATGTGGAG TTTATCGATGGATTGTACAAGGAGCTGTTAAAGCACCCACATGGCATATT GGGTCACAAGCTGGAGGATTGGTACGGCAGCACCTTCCGGCAACATCTGC CCAGTCATTGGTACGATTTGATCGTGAAGTCAAATAAAATTCGTGTTGAG CACGGCATTGATCCAAGGATCATATTGTTTGCCAACGATCCTGGTTCATC GGAGCCGGACCGCACCAGCATAACCACCCTGCCACAGATGGTGCTGCCGT GGCAGTCAAGCGAAGGAGGATCGCACGACTGGAACATGTTCATCAGCTTC TGCGACTCCACCAAGATAGTGTGGGCTCGGATGATCGATCAGATCGCAAA CTTTGAGGAACTGACGAAGCATATTGGACGCCAAATGGAGTCTCCGCATT TCCGACAAAAGGTCTCTAAACCTTACGCTCAGGAAGTCTATTTAGTGGAG ATGCCCGATGGCTGGAATCGTGTTCGTGCAATTTCTGTGGATGAGGAGAC CCGCTCGGGCCGTTATCACTTTATCGACTTTGGCGATGTGGCAATGTTTC ATTCAGAAGATCTCTTCCACTGTCCACCGCAGTTCTTGGCGCTCCCGGCC CAGGCCGTGTGCCTCAGCATGTATGCGTTGGATAAGTTCGAGGATCATCC GCACGCTCTGCAGGTTTTAACAAAGGAGCTGGACGGCCAGACGGTTGTGG CCCATGTGCTCACCACGGAGAAGCAGTTCCTGGAACTGGGTGGATCTGCC CAGGGTGTGGTGGAGAACGGTAAGCGTCGGGCGTGCTTGGTGGCCACGCT GTACGACACCTCAACGGCTGAGGACATTCATCTGAACGATCTGGTTGCGA AAAGAATAACGAAGTGCACGCCGGCACCATCGCTGAGTGATGAAAAGAAG ATCGGCAAGACCACGCCCATTCTTGTGTCTCACATCAACGATGATGGTGA TCTAATGGTGCTGCTACGCAATGATGACCTTAAGTTTGTGGAGCGCAGTA TTGCGCAAACTGTGGCTGATTTGGGCGAGCAGGACCGAGTGAGCTATTCG GATCTGCTCCACGACCGCCATATATTCGTGTGCGACGAGACTGTCGATGG CGTCAAGCAGTGGTTCCGCGGGCGACTGGTCACCAGACCACTGAATCCGG ACGAAGAGTCCTTCGATGTCTACTACGTGGACGATGGACGGCAGCGTAAG GCGCACATCTCTAATATCTACCGCCTGGAGGCAAACAACAGAGCTCTGGC TACGTTCCCGCCACAGGCGATACCCGTTCGCCTGCACGACGTTCCAGAGA TCGGAGGTCATATGCTTCATCGCCTGCGTGGTCTGATACCTTGGCGCACC GAAGCTCTCCTGAAGGTTGTGGCCATGGATGGTGGTAAGCCTCTGGTAAA CGTATTCATCCGCGAGGATCCGGAGTCCATGTATATGTGCGTGAACATTG GCCTTCGCCTGGAGCTCGAGATGGCTAGCTCCCTAAACAACGACATCTGA ATTGTGACTGGTGCCCTATAAGTTTATATTAACAATATAATTGATCCTTT GCTTAATGCTATCTCTATAAGTGCTTCAATAAACCGGAACTGACTTGATA TGTTATTGCTAACACAAATTCGATCTACGTTTTGTAAGCTTACCCTAAAA TCATGCACATCTTTGTATATAATCTGAAAAATATACTCTTAAGCTGCAAT TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 16208691..16211237 | 163..2709 | 12570 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 16211509..16211729 | 2827..3047 | 1075 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 16207551..16207714 | 1..164 | 820 | 100 | Plus |
chr2R | 21145070 | chr2R | 16211306..16211424 | 2710..2828 | 580 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 20321678..20324224 | 163..2709 | 12735 | 100 | Plus |
2R | 25286936 | 2R | 20324496..20324716 | 2827..3047 | 1105 | 100 | Plus |
2R | 25286936 | 2R | 20320527..20320690 | 1..164 | 820 | 100 | Plus |
2R | 25286936 | 2R | 20324293..20324411 | 2710..2828 | 595 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 20322877..20325423 | 163..2709 | 12735 | 100 | Plus |
2R | 25260384 | 2R | 20325695..20325915 | 2827..3047 | 1105 | 100 | Plus |
2R | 25260384 | 2R | 20321726..20321889 | 1..164 | 820 | 100 | Plus |
2R | 25260384 | 2R | 20325492..20325610 | 2710..2828 | 595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 16207551..16207712 | 1..162 | 100 | -> | Plus |
chr2R | 16208691..16211237 | 163..2709 | 99 | -> | Plus |
chr2R | 16211306..16211424 | 2710..2828 | 99 | -> | Plus |
chr2R | 16211511..16211731 | 2829..3051 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8920-RC | 203..2880 | 154..2832 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8920-RE | 203..2898 | 154..2850 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8920-RD | 203..2898 | 154..2850 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8920-RC | 203..2880 | 154..2832 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8920-RD | 203..2898 | 154..2850 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8920-RA | 31..3079 | 1..3051 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8920-RA | 31..3078 | 1..3048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8920-RA | 32..3079 | 1..3048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8920-RA | 31..3079 | 1..3051 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8920-RA | 32..3079 | 1..3048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20320527..20320688 | 1..162 | 100 | -> | Plus |
2R | 20321678..20324224 | 163..2709 | 100 | -> | Plus |
2R | 20324293..20324411 | 2710..2828 | 100 | -> | Plus |
2R | 20324498..20324718 | 2829..3051 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20320527..20320688 | 1..162 | 100 | -> | Plus |
2R | 20321678..20324224 | 163..2709 | 100 | -> | Plus |
2R | 20324293..20324411 | 2710..2828 | 100 | -> | Plus |
2R | 20324498..20324718 | 2829..3051 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20320527..20320688 | 1..162 | 100 | -> | Plus |
2R | 20321678..20324224 | 163..2709 | 100 | -> | Plus |
2R | 20324293..20324411 | 2710..2828 | 100 | -> | Plus |
2R | 20324498..20324718 | 2829..3051 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 16208032..16208193 | 1..162 | 100 | -> | Plus |
arm_2R | 16209183..16211729 | 163..2709 | 100 | -> | Plus |
arm_2R | 16211798..16211916 | 2710..2828 | 100 | -> | Plus |
arm_2R | 16212003..16212223 | 2829..3051 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20325697..20325917 | 2829..3051 | 98 | Plus | |
2R | 20322877..20325423 | 163..2709 | 100 | -> | Plus |
2R | 20325492..20325610 | 2710..2828 | 100 | -> | Plus |
2R | 20321726..20321887 | 1..162 | 100 | -> | Plus |
Translation from 210 to 2849
> LD21403.pep MVRQQKTSKSTSLSKPTPIAQKPKPIAQKHTHGNKYHYQQRNKQPNHQPD QEIGRAAKCENQAIAEHKQDLTGIITQELFESFNNIQGPFSENLQVFNKN PEYITRRKKELKKEDDLDRGQITKEVAREKQKEKETRDRAVTETIFVTIE NKKAPVMNGHGPRHVKVANGQDKHNDGKPPLRAILGNSASQRQQDTSTVY HSPESSFKRPRHPRVMYPGHQRTTGVSVNHRLKVTPQSDAPTPAVAPITP PASPEYAQTTTAAKATYKEDIHGGQGETGNVVTNPKVKVPLKFDPSLDPV STLNFYCAANDFEKPAYNIFNKLRNLHCSVQIAGDVYSSYPQEFTDKETA YQRTAQIAIQRIMHAQSHQKLSACTFSDVEFIDGLYKELLKHPHGILGHK LEDWYGSTFRQHLPSHWYDLIVKSNKIRVEHGIDPRIILFANDPGSSEPD RTSITTLPQMVLPWQSSEGGSHDWNMFISFCDSTKIVWARMIDQIANFEE LTKHIGRQMESPHFRQKVSKPYAQEVYLVEMPDGWNRVRAISVDEETRSG RYHFIDFGDVAMFHSEDLFHCPPQFLALPAQAVCLSMYALDKFEDHPHAL QVLTKELDGQTVVAHVLTTEKQFLELGGSAQGVVENGKRRACLVATLYDT STAEDIHLNDLVAKRITKCTPAPSLSDEKKIGKTTPILVSHINDDGDLMV LLRNDDLKFVERSIAQTVADLGEQDRVSYSDLLHDRHIFVCDETVDGVKQ WFRGRLVTRPLNPDEESFDVYYVDDGRQRKAHISNIYRLEANNRALATFP PQAIPVRLHDVPEIGGHMLHRLRGLIPWRTEALLKVVAMDGGKPLVNVFI REDPESMYMCVNIGLRLELEMASSLNNDI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12261-PA | 1266 | GF12261-PA | 259..1007 | 116..879 | 2439 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22026-PA | 1040 | GG22026-PA | 192..1040 | 39..879 | 3629 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21825-PA | 1006 | GH21825-PA | 283..1004 | 178..871 | 1661 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tapas-PD | 965 | CG8920-PD | 87..965 | 1..879 | 4654 | 100 | Plus |
tapas-PA | 879 | CG8920-PA | 1..879 | 1..879 | 4654 | 100 | Plus |
tapas-PF | 1136 | CG8920-PF | 1..876 | 1..876 | 4631 | 99.8 | Plus |
tapas-PB | 1222 | CG8920-PB | 87..962 | 1..876 | 4631 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20795-PA | 1055 | GI20795-PA | 331..1053 | 178..871 | 1692 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17657-PA | 1304 | GL17657-PA | 336..1038 | 157..871 | 1918 | 52.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24863-PA | 1302 | GA24863-PA | 334..1036 | 157..871 | 1941 | 52.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22008-PA | 714 | GM22008-PA | 87..699 | 1..597 | 2482 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15443-PA | 558 | GD15443-PA | 6..558 | 323..879 | 2806 | 92.6 | Plus |
Dsim\GD15442-PA | 163 | GD15442-PA | 1..146 | 1..141 | 222 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20530-PA | 1865 | GJ20530-PA | 885..1604 | 178..874 | 1649 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17950-PA | 1758 | GK17950-PA | 886..1489 | 285..878 | 1793 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12104-PA | 974 | GE12104-PA | 88..974 | 1..879 | 3642 | 78.8 | Plus |
Translation from 210 to 2849
> LD21403.hyp MVRQQKTSKSTSLSKPTPIAQKPKPIAQKHTHGNKYHYQQRNKQPNHQPD QEIGRAAKCENQAIAEHKQDLTGIITQELFESFNNIQGPFSENLQVFNKN PEYITRRKKELKKEDDLDRGQITKEVAREKQKEKETRDRAVTETIFVTIE NKKAPVMNGHGPRHVKVANGQDKHNDGKPPLRAILGNSASQRQQDTSTVY HSPESSFKRPRHPRVMYPGHQRTTGVSVNHRLKVTPQSDAPTPAVAPITP PASPEYAQTTTAAKATYKEDIHGGQGETGNVVTNPKVKVPLKFDPSLDPV STLNFYCAANDFEKPAYNIFNKLRNLHCSVQIAGDVYSSYPQEFTDKETA YQRTAQIAIQRIMHAQSHQKLSACTFSDVEFIDGLYKELLKHPHGILGHK LEDWYGSTFRQHLPSHWYDLIVKSNKIRVEHGIDPRIILFANDPGSSEPD RTSITTLPQMVLPWQSSEGGSHDWNMFISFCDSTKIVWARMIDQIANFEE LTKHIGRQMESPHFRQKVSKPYAQEVYLVEMPDGWNRVRAISVDEETRSG RYHFIDFGDVAMFHSEDLFHCPPQFLALPAQAVCLSMYALDKFEDHPHAL QVLTKELDGQTVVAHVLTTEKQFLELGGSAQGVVENGKRRACLVATLYDT STAEDIHLNDLVAKRITKCTPAPSLSDEKKIGKTTPILVSHINDDGDLMV LLRNDDLKFVERSIAQTVADLGEQDRVSYSDLLHDRHIFVCDETVDGVKQ WFRGRLVTRPLNPDEESFDVYYVDDGRQRKAHISNIYRLEANNRALATFP PQAIPVRLHDVPEIGGHMLHRLRGLIPWRTEALLKVVAMDGGKPLVNVFI REDPESMYMCVNIGLRLELEMASSLNNDI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8920-PD | 965 | CG8920-PD | 87..965 | 1..879 | 4654 | 100 | Plus |
CG8920-PA | 879 | CG8920-PA | 1..879 | 1..879 | 4654 | 100 | Plus |
CG8920-PF | 1136 | CG8920-PF | 1..876 | 1..876 | 4631 | 99.8 | Plus |
CG8920-PB | 1222 | CG8920-PB | 87..962 | 1..876 | 4631 | 99.8 | Plus |