Clone LD21405 Report

Search the DGRC for LD21405

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:214
Well:5
Vector:pOT2
Associated Gene/TranscriptCG9634-RA
Protein status:LD21405.pep: gold
Preliminary Size:3596
Sequenced Size:3624

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9634 2000-02-14 Blastp of sequenced clone
CG9634 2001-01-01 Release 2 assignment
CG9634 2003-01-01 Sim4 clustering to Release 3
CG9634 2008-04-29 Release 5.5 accounting
CG9634 2008-08-15 Release 5.9 accounting
CG9634 2008-12-18 5.12 accounting

Clone Sequence Records

LD21405.complete Sequence

3624 bp (3624 high quality bases) assembled on 2000-02-14

GenBank Submission: AF132169

> LD21405.complete
CCGTTTAAAAATTAAAAAAAAAAAAAATCATAAACCGCCGCGAAAATTAT
AAGAAGTTGGTATTTGAATTCTTGTTAAGGATACAAAATAATTGAACTCG
AATTTAAAATACGCACAACCCTGTTTTCATTGAGAAGGCGAACATAGCGG
TTTATTCGGTTTCTCGTTGTTGTTGTTGCTGAGCGCGTAAGAATTCAAAG
CAAACCTCCAAAAAATTCGCGCGTATGTGTACTGCCTGATTTTTTTTCGA
GTGTGTGTTTTTGCAAAAAAATATATTTGTAATTGTGGCGGGATGCAAAT
ATTTCGGAATGCCAATGAGCTATAAACAAAAAGAGCTACTTAGGAAGTGA
TTGAAAATGCCGAATCATCTGAATTGAGCGGTAGAAAACGACGAGAGCAC
GACTTAAATCGGCTGATCAGCTGGGGAAACATCGAGTTGCACATCCAAAC
GCAATGGCCATCAATCAGGGCAAGTACAAACCGTCAATCTGCGCCATCGA
CGAGGTGGATGACCGCAGTTTCAAGCTGCACAACAGCCAGGACGAGATCG
GTGGCAAGCAGCAGCTGCAGCAGATCGAGGGCAGCGAAACGGCTCCACTG
ACCACCAATCAGCAGAAGTTGCACATGGACGACGGTTCACATCTGACGCC
CAAGGATCTGGAGGCGGCGCGCCAGGATGCCCTCAACGAGGTCGCTGCCG
GAGGAGCAGGTGGCAGGACACCAGCGGCAATCACACCCAACTCCACGCAT
CCATCGGCCAATGGACTGAGAGCCTTGTTGCTTCCAGGCCGACGATCCTT
CGACGCGCTGATGAGCCTGTCGCGCAAGCGACGCATCCTGTACGTAACCA
CCGCCTGCCTGTGCGCCCTGCTCCTGCTGATCATCATCCTGCTGCTGGCC
TTTTGGCCGGAGGTGCCCTTCTACCTGCGGGCGCCGCTCTGCCTGGATAA
GGAGTGCGTGGAGAGCAGCCGGCAGCTGCTCCTGTGGGCCAACACCTCGA
AGAGTCCTTGCCACGAGACATACGAGTGGGCATGCGGCAATTTTGCCAGC
GATTATGCCAATCATGAGTACTTTGTGATCAAACGCGGCGAGTGGAACTA
CGAGACCTACAATGAGTATCAGGAACTCAATGAACTGAATCGATTTATTG
CAATGCTGCCAAATTCGCAAGAGGGTTCCGTGGAGTCCACGGTGAGCAGT
CTATATCGCAGTTGCCGCGAGACCGATGTCCTCGACAAGAGCCAGTCGGA
TCTGCTCCTGAAACGGGCCATTAATGCAGTGTATGGCTGGCAGGCATTCC
GCGACTCCAATCGACTGCAATCCTGGGAATACAAGCGGGTTCTGGTCGTC
CTACAGGCCAAACATGGCATATTTCCTTACTACCGCGTCACCGTGGAGAA
CGGCTTTAGTAATCCCCACGACTATGTGATCACCCTGGACGAGGGCGAAC
TTGGTCTGCCGGACAAGTACTTCTATGGCAACGATGCTGACGAGGAAGTG
GTTCGTGGCTATAAGCTGCTCCTCCGGGACTTTGCCATCAATATGGGAAT
CGTTTCACGGGAAGCGGATCTATTTGCCGACGATATTTTCCACTATGAAC
GTCGCATTGTTAATCACATTGAGGACGCCAAAGCTGATGCAAATCGTCCG
ATAAATAAACTAATGCGTCTGGCCGATCTGAAGATAAAAGCACCATCTTT
GCCAATTCTGGAGTCCCTGCAGGCCATTTTCCCAAAAACCAAAATCACTG
AAGACACCGAGGTTTTGGTACGAGATCCAGAGGTTATGCATGCCCTATCT
GTTTTACTCTCCACTTCGGATAAGAAGCCTATTAACAACTTTATTGTATG
GTCGCTGGCTCGTAAAATGTTGCCGCATTTGTCCAAGGAGTATCGCACTT
TGGCAGAGACCTTCGACCATGCGTTGTATGGACGCACAGCTAGCTATCCG
AGGTGGCTCATATGCAGCAAAGTGGTGCGTGATTGGCTGCCCTTTGCGGT
GGATGCATTGCAGCAACAGCCACCCAGGCAGCAATTCGAAACGATGACGT
CCAAGAGCCGGGGCTTAAACAAGACCCAGGGCAACGAGGAGCTCCTCAAG
CTGATGTTCTTCAGTCTGCGGAATCAGTTGAAAGATTCGCTGGAGCAAGC
CAAATGGCTGGAGCCGGCGGCTAGGCAATTTATCCAAAAGAAACTGAACG
AGATGCGCCTGCAGTTTGGCATACCCGATGAGGTATTGCAGCAACCCACC
TATCTTGCGCAATACTACAATGAACTGATACTCAATAATGTGTTTTTCGT
GGAGCATTTGGAGTGGATTTGGACATTCCGTCGATCGCAAATGGAAAAGA
AGCTGGGACCGCTGGCCATACTGGATGTCATTGTTTCCGAGATGTACACA
AGGGACAATCCACAGGCCATCGCCTACTCCAATAAACTGAATATGCTGCT
GGTCTCTAAGGTGTTGATTAGCTCCAATTACTATGACTACCGATATCCTG
TAGCTGTGAATTTTGCCCGCATAGGCACTGATATATTGGAGGCCCTGATC
GATAACTTCTCCACCTTCCTGCTGCAGTTCAACACCCAGAGCACGGATAT
CAGTGATGCAGCACCGGAGATTCGGTATGCCCAGCCGGATGTTAATTGTC
TGGCAGCAGGACAGCCACCGAGGTTGGTCCACGAGCTGAATGAGCTGTCT
AGTAATGCACTGAAGAGCTTCCATGTAACGCTGAGTGCAGCTCGAACGGC
AGCGAGGGCGTTGAGTAACTTCGTGAATGCCATCGATGCGGGCAGTGCCA
TCCAGGGATCGGGAATCGATCAGGCTAATACCTATGAGGCCCTTGGACTT
ACCAGGCGCTTGAGAATACCCGGTCTGAGGTCTTTCAACGAGAACGAACT
CTTTACGCTCTCCTACATGCAGCAGCACTGCAGCACCACAATTGCTGACA
AGGACTACGCCAGGATTAAGCCGCTCGTAGAGAGCCAGCTGGCCGAGAGT
TATCTCTTTAACGCCACATGGCAGCATATCCAGTTTCTACCCCGCTCCAC
AAACTGTGCCGCCGCGGAGGCGACTTGCTCCAACCTGCTCTGAGATGCGA
TTTTCCATCCACCAGGACCTCCACCTCAGCCAGAGCCCTGTGGATGAACC
GGATGATGATGTCCTTCGGCAGCTGCGAAACGGAACAACCTATTTATTGT
ACTTTTTTTTACTCCCACACATTGCCAGAGACACAGATACAGAATACACG
ATACACCTGACAGATACAGACAGACACTGACCCCACACCACACACACATC
GCCCTAGTTGTAGTTTAGCGATTAAGCCTAGCACGTAGCTTAACCATGAA
GGATCAGACTTGACATTGACTAGCCACTGTTGACATCACGCCACACATTC
GCAATCTGCTCCAATTGGACACGAAGTAACCAAGTGGGGCAGCAAGTCGG
CTTAAGTACGAACCCTACGCCTAGTTTAGTCTAGTTCGATAGCCATAACT
TAGTTAGTTGCTAAGCGCCGTCTGCCACCCTGTATAAATTGATTGAATTT
GATTTTTGAAGAACCATTAAATGCGAATGACTTTTCACACAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

LD21405.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:42:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG9634-RA 3769 CG9634-RA 71..3663 1..3592 17910 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16616956..16617541 3590..3006 2865 99.7 Minus
chrX 22417052 chrX 16618425..16618976 2378..1827 2655 98.7 Minus
chrX 22417052 chrX 16617602..16618105 3005..2502 2445 99 Minus
chrX 22417052 chrX 16635177..16635617 772..332 2190 99.8 Minus
chrX 22417052 chrX 16634507..16634863 1123..767 1710 98.6 Minus
chrX 22417052 chrX 16641169..16641485 333..17 1540 99.1 Minus
chrX 22417052 chrX 16619433..16619697 1547..1283 1295 99.2 Minus
chrX 22417052 chrX 16634276..16634435 1282..1123 785 99.4 Minus
chrX 22417052 chrX 16619224..16619375 1697..1546 745 99.3 Minus
chrX 22417052 chrX 16618190..16618312 2501..2379 615 100 Minus
chrX 22417052 chrX 16619038..16619166 1827..1699 600 97.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:09:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:47:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16727302..16727889 3592..3006 2890 99.8 Minus
X 23542271 X 16728774..16729325 2378..1827 2745 99.8 Minus
X 23542271 X 16727950..16728453 3005..2502 2520 100 Minus
X 23542271 X 16745515..16745955 772..332 2205 100 Minus
X 23542271 X 16744845..16745201 1123..767 1770 99.7 Minus
X 23542271 X 16751508..16751840 333..1 1665 100 Minus
X 23542271 X 16729782..16730046 1547..1283 1325 100 Minus
X 23542271 X 16744614..16744773 1282..1123 800 100 Minus
X 23542271 X 16729572..16729724 1698..1546 765 100 Minus
X 23542271 X 16729387..16729515 1827..1699 645 100 Minus
X 23542271 X 16728538..16728660 2501..2379 615 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16735400..16735987 3592..3006 2900 99.8 Minus
X 23527363 X 16736872..16737423 2378..1827 2745 99.8 Minus
X 23527363 X 16736048..16736551 3005..2502 2520 100 Minus
X 23527363 X 16753613..16754053 772..332 2205 100 Minus
X 23527363 X 16752943..16753299 1123..767 1770 99.7 Minus
X 23527363 X 16759606..16759938 333..1 1665 100 Minus
X 23527363 X 16737880..16738144 1547..1283 1325 100 Minus
X 23527363 X 16752712..16752871 1282..1123 800 100 Minus
X 23527363 X 16737670..16737822 1698..1546 765 100 Minus
X 23527363 X 16737485..16737613 1827..1699 645 100 Minus
X 23527363 X 16736636..16736758 2501..2379 615 100 Minus
Blast to na_te.dros performed on 2019-03-16 18:47:28 has no hits.

LD21405.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:48:08 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16616956..16617541 3006..3590 99 <- Minus
chrX 16617602..16618105 2502..3005 99 <- Minus
chrX 16618190..16618312 2379..2501 100 <- Minus
chrX 16618425..16618976 1827..2378 98 <- Minus
chrX 16619039..16619166 1699..1826 97 <- Minus
chrX 16619223..16619374 1547..1698 98 <- Minus
chrX 16619434..16619697 1283..1546 99 <- Minus
chrX 16634276..16634434 1124..1282 99 <- Minus
chrX 16634507..16634857 773..1123 98 <- Minus
chrX 16635177..16635615 334..772 99 <- Minus
chrX 16641169..16641498 1..333 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:51:03 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
CG9634-RA 1..2640 454..3093 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:35:50 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
CG9634-RA 1..2640 454..3093 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:17:21 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
CG9634-RA 1..2640 454..3093 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:11:46 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
CG9634-RA 1..2640 454..3093 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:51:16 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
CG9634-RA 1..2640 454..3093 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:51:01 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
CG9634-RA 71..3661 1..3590 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:35:50 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
CG9634-RA 71..3661 1..3590 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:17:21 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
CG9634-RA 71..3661 1..3590 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:11:46 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
CG9634-RA 71..3661 1..3590 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:51:16 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
CG9634-RA 71..3661 1..3590 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:48:08 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
X 16729572..16729723 1547..1698 100 <- Minus
X 16729783..16730046 1283..1546 100 <- Minus
X 16744614..16744772 1124..1282 100 <- Minus
X 16727304..16727889 3006..3590 99 <- Minus
X 16727950..16728453 2502..3005 100 <- Minus
X 16728538..16728660 2379..2501 100 <- Minus
X 16728774..16729325 1827..2378 99 <- Minus
X 16729388..16729515 1699..1826 100 <- Minus
X 16744845..16745195 773..1123 100 <- Minus
X 16745515..16745953 334..772 100 <- Minus
X 16751508..16751840 1..333 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:48:08 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
X 16729572..16729723 1547..1698 100 <- Minus
X 16729783..16730046 1283..1546 100 <- Minus
X 16744614..16744772 1124..1282 100 <- Minus
X 16727304..16727889 3006..3590 99 <- Minus
X 16727950..16728453 2502..3005 100 <- Minus
X 16728538..16728660 2379..2501 100 <- Minus
X 16728774..16729325 1827..2378 99 <- Minus
X 16729388..16729515 1699..1826 100 <- Minus
X 16744845..16745195 773..1123 100 <- Minus
X 16745515..16745953 334..772 100 <- Minus
X 16751508..16751840 1..333 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:48:08 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
X 16729572..16729723 1547..1698 100 <- Minus
X 16729783..16730046 1283..1546 100 <- Minus
X 16744614..16744772 1124..1282 100 <- Minus
X 16727304..16727889 3006..3590 99 <- Minus
X 16727950..16728453 2502..3005 100 <- Minus
X 16728538..16728660 2379..2501 100 <- Minus
X 16728774..16729325 1827..2378 99 <- Minus
X 16729388..16729515 1699..1826 100 <- Minus
X 16744845..16745195 773..1123 100 <- Minus
X 16745515..16745953 334..772 100 <- Minus
X 16751508..16751840 1..333 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:17:21 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16623816..16624079 1283..1546 100 <- Minus
arm_X 16638647..16638805 1124..1282 100 <- Minus
arm_X 16621337..16621922 3006..3590 99 <- Minus
arm_X 16621983..16622486 2502..3005 100 <- Minus
arm_X 16622571..16622693 2379..2501 100 <- Minus
arm_X 16622807..16623358 1827..2378 99 <- Minus
arm_X 16623421..16623548 1699..1826 100 <- Minus
arm_X 16623605..16623756 1547..1698 100 <- Minus
arm_X 16638878..16639228 773..1123 100 <- Minus
arm_X 16639548..16639986 334..772 100 <- Minus
arm_X 16645541..16645873 1..333 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:48:11 Download gff for LD21405.complete
Subject Subject Range Query Range Percent Splice Strand
X 16735402..16735987 3006..3590 99 <- Minus
X 16736048..16736551 2502..3005 100 <- Minus
X 16736636..16736758 2379..2501 100 <- Minus
X 16736872..16737423 1827..2378 99 <- Minus
X 16737486..16737613 1699..1826 100 <- Minus
X 16737670..16737821 1547..1698 100 <- Minus
X 16737881..16738144 1283..1546 100 <- Minus
X 16752712..16752870 1124..1282 100 <- Minus
X 16752943..16753293 773..1123 100 <- Minus
X 16753613..16754051 334..772 100 <- Minus
X 16759606..16759938 1..333 100   Minus

LD21405.pep Sequence

Translation from 453 to 3092

> LD21405.pep
MAINQGKYKPSICAIDEVDDRSFKLHNSQDEIGGKQQLQQIEGSETAPLT
TNQQKLHMDDGSHLTPKDLEAARQDALNEVAAGGAGGRTPAAITPNSTHP
SANGLRALLLPGRRSFDALMSLSRKRRILYVTTACLCALLLLIIILLLAF
WPEVPFYLRAPLCLDKECVESSRQLLLWANTSKSPCHETYEWACGNFASD
YANHEYFVIKRGEWNYETYNEYQELNELNRFIAMLPNSQEGSVESTVSSL
YRSCRETDVLDKSQSDLLLKRAINAVYGWQAFRDSNRLQSWEYKRVLVVL
QAKHGIFPYYRVTVENGFSNPHDYVITLDEGELGLPDKYFYGNDADEEVV
RGYKLLLRDFAINMGIVSREADLFADDIFHYERRIVNHIEDAKADANRPI
NKLMRLADLKIKAPSLPILESLQAIFPKTKITEDTEVLVRDPEVMHALSV
LLSTSDKKPINNFIVWSLARKMLPHLSKEYRTLAETFDHALYGRTASYPR
WLICSKVVRDWLPFAVDALQQQPPRQQFETMTSKSRGLNKTQGNEELLKL
MFFSLRNQLKDSLEQAKWLEPAARQFIQKKLNEMRLQFGIPDEVLQQPTY
LAQYYNELILNNVFFVEHLEWIWTFRRSQMEKKLGPLAILDVIVSEMYTR
DNPQAIAYSNKLNMLLVSKVLISSNYYDYRYPVAVNFARIGTDILEALID
NFSTFLLQFNTQSTDISDAAPEIRYAQPDVNCLAAGQPPRLVHELNELSS
NALKSFHVTLSAARTAARALSNFVNAIDAGSAIQGSGIDQANTYEALGLT
RRLRIPGLRSFNENELFTLSYMQQHCSTTIADKDYARIKPLVESQLAESY
LFNATWQHIQFLPRSTNCAAAEATCSNLL*

LD21405.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:00:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22288-PA 885 GF22288-PA 1..885 1..879 4078 87 Plus
Dana\GF20227-PA 794 GF20227-PA 54..636 121..702 294 21.4 Plus
Dana\GF18324-PA 1042 GF18324-PA 435..880 235..702 269 22.9 Plus
Dana\GF20372-PA 867 GF20372-PA 190..719 162..713 236 19.4 Plus
Dana\GF16094-PA 765 GF16094-PA 85..728 162..844 220 21.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:00:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18227-PA 879 GG18227-PA 1..879 1..879 4650 97.8 Plus
Dere\GG19262-PA 790 GG19262-PA 107..738 163..829 305 21.6 Plus
Dere\GG19572-PA 842 GG19572-PA 165..805 162..844 270 20 Plus
Dere\GG15258-PA 1038 GG15258-PA 443..876 247..702 259 21.2 Plus
Dere\GG11422-PA 764 GG11422-PA 84..616 162..713 214 22 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:00:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12802-PA 886 GH12802-PA 1..886 1..879 3700 76.5 Plus
Dgri\GH24626-PA 787 GH24626-PA 104..629 163..702 298 21.2 Plus
Dgri\GH16092-PA 1033 GH16092-PA 434..871 243..702 245 20.2 Plus
Dgri\GH24851-PA 875 GH24851-PA 198..727 162..713 244 20.2 Plus
Dgri\GH18118-PA 769 GH18118-PA 89..621 162..713 207 21.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
goe-PC 879 CG9634-PC 1..879 1..879 4556 100 Plus
goe-PA 879 CG9634-PA 1..879 1..879 4556 100 Plus
goe-PB 874 CG9634-PB 1..874 1..879 4517 99.4 Plus
Nep3-PC 786 CG9565-PC 103..617 163..691 313 22 Plus
Nep3-PB 786 CG9565-PB 103..617 163..691 313 22 Plus
Nep3-PA 786 CG9565-PA 103..617 163..691 313 22 Plus
Nep4-PC 978 CG4058-PC 385..816 249..702 277 21.3 Plus
Nep4-PB 978 CG4058-PB 385..816 249..702 277 21.3 Plus
Nep4-PA 1040 CG4058-PA 447..878 249..702 277 21.3 Plus
Nep1-PD 849 CG5905-PD 172..700 162..712 268 20.1 Plus
Nep1-PC 849 CG5905-PC 172..700 162..712 268 20.1 Plus
Nep1-PA 849 CG5905-PA 172..700 162..712 268 20.1 Plus
Nep1-PB 849 CG5905-PB 172..700 162..712 268 20.1 Plus
Nep2-PB 774 CG9761-PB 83..625 162..712 219 20.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:00:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15957-PA 879 GI15957-PA 1..879 1..879 3672 78.1 Plus
Dmoj\GI15813-PA 794 GI15813-PA 46..626 121..702 294 20.8 Plus
Dmoj\GI22167-PA 617 GI22167-PA 24..455 249..702 255 21.1 Plus
Dmoj\GI16188-PA 880 GI16188-PA 203..732 162..713 241 20.5 Plus
Dmoj\GI23832-PA 788 GI23832-PA 108..640 162..713 211 21.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:00:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26769-PA 1124 GL26769-PA 1..620 1..604 2601 82.9 Plus
Dper\GL13072-PA 757 GL13072-PA 50..585 121..659 293 22.7 Plus
Dper\GL27139-PA 1049 GL27139-PA 457..887 250..702 248 22 Plus
Dper\GL21487-PA 768 GL21487-PA 89..620 163..713 216 21.1 Plus
Dper\GL14909-PA 775 GL14909-PA 142..738 162..844 191 18.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:00:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21929-PA 884 GA21929-PA 1..884 1..879 3906 85.2 Plus
Dpse\GA21880-PA 785 GA21880-PA 46..627 121..702 315 22.6 Plus
Dpse\GA19217-PA 887 GA19217-PA 210..850 162..844 247 19.6 Plus
Dpse\GA26744-PA 1045 GA26744-PA 453..883 250..702 246 22 Plus
Dpse\GA22015-PB 768 GA22015-PB 89..620 163..713 209 21 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:00:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13369-PA 609 GM13369-PA 6..609 276..879 3171 97.7 Plus
Dsec\GM20510-PA 274 GM20510-PA 1..271 1..276 1445 97.5 Plus
Dsec\GM23172-PA 1040 GM23172-PA 447..878 249..702 259 21.3 Plus
Dsec\GM12465-PA 850 GM12465-PA 173..813 162..844 246 19.3 Plus
Dsec\GM23001-PA 759 GM23001-PA 111..707 163..829 241 20.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15726-PA 879 GD15726-PA 1..879 1..879 4662 98.4 Plus
Dsim\GD20045-PA 1040 GD20045-PA 447..878 249..702 256 21.3 Plus
Dsim\GD17471-PA 579 GD17471-PA 170..578 168..585 216 21.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18849-PA 881 GJ18849-PA 1..881 1..879 3684 78.5 Plus
Dvir\GJ18666-PA 792 GJ18666-PA 54..634 121..702 305 20.8 Plus
Dvir\GJ24287-PA 1056 GJ24287-PA 461..894 247..702 251 21.3 Plus
Dvir\GJ23291-PA 797 GJ23291-PA 117..760 162..844 236 22.1 Plus
Dvir\GJ16677-PA 856 GJ16677-PA 179..708 162..713 226 20.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25501-PA 909 GK25501-PA 1..909 1..879 3704 76.8 Plus
Dwil\GK16267-PA 785 GK16267-PA 102..627 163..702 267 21.3 Plus
Dwil\GK22708-PA 1027 GK22708-PA 432..865 247..702 264 21.8 Plus
Dwil\GK15832-PA 887 GK15832-PA 210..850 162..844 231 19.8 Plus
Dwil\GK14429-PA 772 GK14429-PA 92..624 162..713 224 22.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15646-PA 879 GE15646-PA 1..879 1..879 4648 98 Plus
Dyak\GE15881-PA 786 GE15881-PA 103..734 163..829 313 21.6 Plus
Dyak\GE25050-PA 1040 GE25050-PA 445..878 247..702 260 21.2 Plus
Dyak\GE16732-PA 843 GE16732-PA 64..806 80..844 250 19.3 Plus
Dyak\GE25338-PA 764 GE25338-PA 84..616 162..713 215 21.6 Plus

LD21405.hyp Sequence

Translation from 453 to 3092

> LD21405.hyp
MAINQGKYKPSICAIDEVDDRSFKLHNSQDEIGGKQQLQQIEGSETAPLT
TNQQKLHMDDGSHLTPKDLEAARQDALNEVAAGGAGGRTPAAITPNSTHP
SANGLRALLLPGRRSFDALMSLSRKRRILYVTTACLCALLLLIIILLLAF
WPEVPFYLRAPLCLDKECVESSRQLLLWANTSKSPCHETYEWACGNFASD
YANHEYFVIKRGEWNYETYNEYQELNELNRFIAMLPNSQEGSVESTVSSL
YRSCRETDVLDKSQSDLLLKRAINAVYGWQAFRDSNRLQSWEYKRVLVVL
QAKHGIFPYYRVTVENGFSNPHDYVITLDEGELGLPDKYFYGNDADEEVV
RGYKLLLRDFAINMGIVSREADLFADDIFHYERRIVNHIEDAKADANRPI
NKLMRLADLKIKAPSLPILESLQAIFPKTKITEDTEVLVRDPEVMHALSV
LLSTSDKKPINNFIVWSLARKMLPHLSKEYRTLAETFDHALYGRTASYPR
WLICSKVVRDWLPFAVDALQQQPPRQQFETMTSKSRGLNKTQGNEELLKL
MFFSLRNQLKDSLEQAKWLEPAARQFIQKKLNEMRLQFGIPDEVLQQPTY
LAQYYNELILNNVFFVEHLEWIWTFRRSQMEKKLGPLAILDVIVSEMYTR
DNPQAIAYSNKLNMLLVSKVLISSNYYDYRYPVAVNFARIGTDILEALID
NFSTFLLQFNTQSTDISDAAPEIRYAQPDVNCLAAGQPPRLVHELNELSS
NALKSFHVTLSAARTAARALSNFVNAIDAGSAIQGSGIDQANTYEALGLT
RRLRIPGLRSFNENELFTLSYMQQHCSTTIADKDYARIKPLVESQLAESY
LFNATWQHIQFLPRSTNCAAAEATCSNLL*

LD21405.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:56:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG9634-PC 879 CG9634-PC 1..879 1..879 4556 100 Plus
CG9634-PA 879 CG9634-PA 1..879 1..879 4556 100 Plus
CG9634-PB 874 CG9634-PB 1..874 1..879 4517 99.4 Plus
Nep4-PC 978 CG4058-PC 385..816 249..702 277 21.3 Plus
Nep4-PB 978 CG4058-PB 385..816 249..702 277 21.3 Plus