Clone LD21416 Report

Search the DGRC for LD21416

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:214
Well:16
Vector:pOT2
Associated Gene/TranscriptEdem1-RA
Protein status:LD21416.pep: gold
Preliminary Size:4084
Sequenced Size:4270

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3810 2002-06-06 Blastp of sequenced clone
CG3810 2003-01-01 Sim4 clustering to Release 3
Edem1 2008-04-29 Release 5.5 accounting
Edem1 2008-08-15 Release 5.9 accounting
Edem1 2008-12-18 5.12 accounting

Clone Sequence Records

LD21416.complete Sequence

4270 bp (4270 high quality bases) assembled on 2002-06-06

GenBank Submission: AY119600

> LD21416.complete
CGACAGCCCTGACCAAAAAATTTAATATTTTTCTTTAATTGTTTATAAAT
ATGCAAACAACTGGGTGGAAACACGATTTCCAGATCCCAAATGGCACACG
CTTATATCTACGGTCAACGGGATGGTTTCAATGTGGTTTCTGGTCAGCCA
GAGGCAATCCCGCATGTATAGACCCACAATGTTGTTACTTTTCGCCCAAC
GGACAATTAAGCATACGCGATTGCATTTAAACGATCGCCTTACGCGGAGT
ACAAAAGGCACACGGGCCGTGATGCAGTTACTCCGCGAGGTTATAGTCGA
CCCTCTTTCTGAGTTTTTTTTACGCGGAGAATGATTCAAAACCGAAACAC
ATCGCTGCCCATCGCCAGAACTGCAATTCGCAGTCGGAAGCGTAACAAAG
GCTGCGGATTTCTTGGTCAGCTCATCCGGAGGATGTCCGGGTGTGAAACG
GGTGCAGAGGGCAGTTACTTACCATAGGCGCTCTATAAAAAAACACTCAC
CGAACGGAATTAGTAGGGCATTCGGCGGTCGATGCCACCGCCGAATCAGC
CCTTGTTGTGATTTTGCGTCAACGTAGCCGCATTTGACTTCCACACATCC
CACATCCACGCTGGCTATGGAACACTGACCATGCCCATAATTGAATTAGC
GGCCCTGATTGATTGACTGTCCCACGATGCAGCAAAAACCCCGAAACAAC
GGCTATCCGGGCACCCTCATCTGCGCGGTCCTCCTCGTCCTGCTGTCCAC
CGGTGTCAGCGGCCAGAAGCAGTATTCCAAGGCAAGAAAGTTGGAACTGA
GGGAGGATGTGCGGCGCATGTTCCAGCACGCCTACGATGGTTACCTGCGC
CACGCCTCCAACTACGATGAACTGCGTCCGCTGACCTGCGATGGCCACGA
CACCTGGGGCAGCTACTCCTTGACACTGATCGACGCTCTGGACACGCTGG
CCACCATGGGCAACTTCACGGAATTCCGCCGCGCGGCAAGACTGCTCGAG
GAGAAGATGGATTTTGACAGGGACATCAACGTGTCCGTGTTCGAGACAAA
CATCCGCATCGTGGGCGGGCTGCTGTCCGCGCATCTGCTCTCCAAGCGTG
CTGGCGTAGAGCTAGAGCCAGGATGGCCCTGCAAGGGACCTCTGCTGCGA
CTGGCGGAGGATGTGGCCCGACGATTATTGCCAGCCTTCGTCACGAACAC
GGGTATGCCTTATGGCACGGTGAACCTGCGCTATGGCGTGCCCAAGGGCG
AGACCTCTATAACCTGTACGGCGGGCGTGGGGACATTCCTCATCGAATTT
GGTACCCTTAGCCGGTTGACCGGGAAAACCATCTACGAGGATGTTGCTAT
GAAGGCGGTACATGCTCTATGGGCATATCGCTCGCCCATTGGACTTTTTG
GCAATCACATCGACGTGCAGAGCGGTCGTTGGACCGCCCTCGACTCTGGT
ATCGGAGCAGGAGTGGATTCCCTTTTTGAATACCTAGTTAAGGCATCTGT
CCTGCTCAATCGCCCAGAACTCTTGGAGTTATTCCATGAGGCTCGCGCGG
CCATTGATAAGTACATGCGGAAGGAGGACTGGTACGTGTGGGTAGGCATG
AACAAAGGCCGCGTCACCCTTCCCGTCTTTCAGTCCCTGGAGGCGTTTTG
GCCCGGCATCCTGAGCATTATTGGCGACACGGAGCCGGCCTTGCGCACCA
TATCACGGTACATTGGGGTCTGGAAGAAGTACGGCTTTCTGCCAGAGTTT
TATAACATTGCTGCTGGAGAGGCATCGCCGAATCGGGAGGTGTACCCCCT
GCGACCGGAGCTAATCGAGTCAGCTATGTATCTCTATCGAGCCACAGGAA
ACGAGTATCTTCTGGAGTTTGGTGAGCACATGCTGGAGACCTTGGAGTTC
AGTGCCAAAACCAAATGCGGATATGCAACGATTCGCAATGTTGTCACCCA
CGAAAAGGAGAATCGCATGGAGTCATTCTTCCTGGCGGAAACAAGCAAGT
ACCTTTATCTGCTGTTTGACGAGGAAAACTTCCTGCACAACGATGGGTCC
GGAGGCGAGCTGCTGTCAACCGAGGATGATGTATGCGTGGTACAGGCCGG
TGCGTACATCTTCAACACAGAGGCTCATCCCATGGACATGTCAGCCCTCC
ACTGTTGCCACGCCCACAACGAGGACATCTACACCTCTCTGGATCTACAG
CGGTTTAGTCCACGGGCGATATTAGAGAGGAGCAAAAAGCGGCAGGTAGC
TGTTCAGGAACAGTGGGTGCCGCAGTGTCACCCAGAGAACAACGAGTTCT
TTAATAAAGAGGATGAGAGTGTGCAGGCGCAGGACTCTGAAAAAGAGCAG
GAACGCGAGCAATCCGGCACAAGCACTACCATGGCCGTAGATATTGAGGT
GTTCGACGAATTTCAACAGCCCGCCGGCGATCTGTTAGTAAGCAACTTCG
AGCAGATACGCGAGGAGCGGGAGCTAAACGAGAGCCTGCACAGAAACGTG
GTGGCACGAAACCAGTTGACAGTCAGCGATTTGGATGAATTCTTTGCTCA
GCGACGGGAGAGTTTCGCAAGCGCCTCCGAGGCTCTTAACTATGTAAAGA
CCTTCATGGGCAACTATACCATGGATGTAGCCTTTATACGGGGCTTGCAA
CTGTACGATACTAATATGAGTAGTGTATTGGGCACAGGCGCCCAGAAAGA
GTATGAGTCTCGAATGAGGACCCTTTGGCAGCTGTACGAACTGCAGCAGC
AATATGTGGCCAACATCCGAGTGATTCAAGGATTAGGTTTGCTAACCTTT
CCGGCGGACGGTGACCGGATACCTAGCCATTTGACAGAGGTGTTGGACAG
CCTGGATAAGTCGGCTCACTTGGAGCATATGGATCTACAAGATCTCGAAA
CAAGAGTGTCCAATACCTCCTCGCCCCAGTTGGCTCATATAAGAGAAGTT
ATTCTAAAAGCACGTAATGCCTATGCCATAGCCATGGTCAATACTTCGGC
CATGCAGGAATTTGCTATCCGAATCTACCTCAGTGGCACTTCGGAGGCCG
GTGTTCGCATTCACCCACTTTTGGAAGACGGAGAACTAAGTGAGGAAGCA
CGTAAAAGGCCATTAAAGTTGGCGGAGGAGCGAGCCCTCTTCAGCTACGC
CCGTCGAATAGTGGACTTTCGGAAACGAATGGCGGAGACAGTTGATCGAT
TGCAGACGCTCATGCAGGACATTCCGCCACCCAAAAGGAAAGAGGCCACT
ACCGACTCTCAGGCCGCAGATGCGTCCACAGTCTACACTCAAACCAAAGC
CCAGATGGCGGCGCCTGCACAGCAGCCGGAGCCGAGCCAGGAAGAGAAGC
AGTCGACACAAATTCAAAAAGGAAAGCTTGCCGAAAACGGCTCCGGATTG
GGTGAAGAGGAGTCCGGCTGCGTGTGGTCGCAGTTGGTGCAGACCATCCT
TCGGAAGACCACGGTGCAGCGGGTCAAATTTGACGAGGCCGTGCTCCAGG
AAAATACGCGCAAGGCACTGGAGAAGTACGCCCGCAAGGAGTTACCCCAC
CATCTGTTCGCCTGCCACCGGCCGGAGTACATTGAGGGATTCGCCTATCG
GGACTTTTATCCGGAAGCGCTGTAAGCTCGCAATCACCTCACCGACCAAC
ACGACTGATCTGTAGATAGATATCAAAGTTCGGCGTCGATGCGCGCATGA
CAATGAGCGACTCAATTGCAGAGCGAAAAGGACAGAGCGCTAAGCCAAAG
CGGCAAGCGCGAAAGTACAAGATGAAGACAGCGCGAGAGGAGGGGAACTT
AGATAACGAAAGAGAACCATCACCTCTAACGGTTTTCTGATATGTTGCCG
ATCATGATATTTGCAGTGCTGTACTTTGTACTTTTCTATCGTTTAAATTG
TAAGCTATGTACATATATGTACGTACATATGTATGCAATTACCAAACCAT
TTCCAGGAATTTCAACTTCTTGTACAATCATGTTTACCAGCGATTTTTTA
AAGCTCAGTTAAGATATGATAATAGAACTTCCAAAAATATGTATAGCTAA
AGAACCTTAAGTGGTCCTACTTGTGCCGACAATTAATTTAATTAGCATAT
GAACCCGCAACTCTTGAGGTTTTCTCAATACCTTACCAAGGCTTAAACAA
ATTTATATCTGTAATAATAATGGTTCGAGTGCTTGTGTGCGTGTAAACTA
TTTGCGATGACTGTTGTTGGCTGTATTGTAATTAAATTGATTTATTTCCG
TAAAAAAAAAAAAAAAAAAA

LD21416.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:53:24
Subject Length Description Subject Range Query Range Score Percent Strand
Edem1-RC 4253 Edem1-RC 1..4252 1..4252 21260 100 Plus
Edem1.c 4407 Edem1.c 304..3499 478..3673 15980 100 Plus
Edem1.a 3931 Edem1.a 304..3499 478..3673 15980 100 Plus
Edem1.c 4407 Edem1.c 3711..4289 3674..4252 2895 100 Plus
Edem1.a 3931 Edem1.a 3711..3931 3674..3894 1105 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1798336..1800079 3673..1930 8720 100 Minus
chrX 22417052 chrX 1800149..1801279 1930..800 5655 100 Minus
chrX 22417052 chrX 1797547..1798124 4251..3674 2890 100 Minus
chrX 22417052 chrX 1802193..1802670 478..1 2390 100 Minus
chrX 22417052 chrX 1801337..1801661 802..478 1625 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:09:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1904493..1906236 3673..1930 8720 100 Minus
X 23542271 X 1906306..1907436 1930..800 5655 100 Minus
X 23542271 X 1903703..1904281 4252..3674 2895 100 Minus
X 23542271 X 1908350..1908827 478..1 2390 100 Minus
X 23542271 X 1907494..1907818 802..478 1625 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:25:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 1912591..1914334 3673..1930 8720 100 Minus
X 23527363 X 1914404..1915534 1930..800 5655 100 Minus
X 23527363 X 1911801..1912379 4252..3674 2895 100 Minus
X 23527363 X 1916448..1916925 478..1 2390 100 Minus
X 23527363 X 1915592..1915916 802..478 1625 100 Minus
Blast to na_te.dros performed on 2019-03-16 14:54:06 has no hits.

LD21416.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:54:47 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1797547..1798124 3674..4251 100 <- Minus
chrX 1798336..1800078 1931..3673 100 <- Minus
chrX 1800149..1801277 802..1930 100 <- Minus
chrX 1801338..1801660 479..801 100 <- Minus
chrX 1802193..1802670 1..478 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:56:04 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
Edem1-RA 1..2949 677..3625 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:30:39 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
Edem1-RA 1..2949 677..3625 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:31:06 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
Edem1-RB 1..2949 677..3625 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:20:47 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
Edem1-RA 1..2949 677..3625 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:38:06 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
Edem1-RB 1..2949 677..3625 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:00:26 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
Edem1-RC 1..4249 1..4249 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:30:39 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
Edem1-RC 1..4251 1..4251 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:06 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
Edem1-RC 1..4251 1..4251 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:20:48 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
Edem1-RC 1..4249 1..4249 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:38:06 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
Edem1-RC 1..4251 1..4251 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:54:47 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
X 1903704..1904281 3674..4251 100 <- Minus
X 1904493..1906235 1931..3673 100 <- Minus
X 1906306..1907434 802..1930 100 <- Minus
X 1907495..1907817 479..801 100 <- Minus
X 1908350..1908827 1..478 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:54:47 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
X 1903704..1904281 3674..4251 100 <- Minus
X 1904493..1906235 1931..3673 100 <- Minus
X 1906306..1907434 802..1930 100 <- Minus
X 1907495..1907817 479..801 100 <- Minus
X 1908350..1908827 1..478 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:54:47 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
X 1903704..1904281 3674..4251 100 <- Minus
X 1904493..1906235 1931..3673 100 <- Minus
X 1906306..1907434 802..1930 100 <- Minus
X 1907495..1907817 479..801 100 <- Minus
X 1908350..1908827 1..478 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:06 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1797737..1798314 3674..4251 100 <- Minus
arm_X 1798526..1800268 1931..3673 100 <- Minus
arm_X 1800339..1801467 802..1930 100 <- Minus
arm_X 1801528..1801850 479..801 100 <- Minus
arm_X 1802383..1802860 1..478 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:54:32 Download gff for LD21416.complete
Subject Subject Range Query Range Percent Splice Strand
X 1911802..1912379 3674..4251 100 <- Minus
X 1912591..1914333 1931..3673 100 <- Minus
X 1914404..1915532 802..1930 100 <- Minus
X 1915593..1915915 479..801 100 <- Minus
X 1916448..1916925 1..478 100   Minus

LD21416.pep Sequence

Translation from 676 to 3624

> LD21416.pep
MQQKPRNNGYPGTLICAVLLVLLSTGVSGQKQYSKARKLELREDVRRMFQ
HAYDGYLRHASNYDELRPLTCDGHDTWGSYSLTLIDALDTLATMGNFTEF
RRAARLLEEKMDFDRDINVSVFETNIRIVGGLLSAHLLSKRAGVELEPGW
PCKGPLLRLAEDVARRLLPAFVTNTGMPYGTVNLRYGVPKGETSITCTAG
VGTFLIEFGTLSRLTGKTIYEDVAMKAVHALWAYRSPIGLFGNHIDVQSG
RWTALDSGIGAGVDSLFEYLVKASVLLNRPELLELFHEARAAIDKYMRKE
DWYVWVGMNKGRVTLPVFQSLEAFWPGILSIIGDTEPALRTISRYIGVWK
KYGFLPEFYNIAAGEASPNREVYPLRPELIESAMYLYRATGNEYLLEFGE
HMLETLEFSAKTKCGYATIRNVVTHEKENRMESFFLAETSKYLYLLFDEE
NFLHNDGSGGELLSTEDDVCVVQAGAYIFNTEAHPMDMSALHCCHAHNED
IYTSLDLQRFSPRAILERSKKRQVAVQEQWVPQCHPENNEFFNKEDESVQ
AQDSEKEQEREQSGTSTTMAVDIEVFDEFQQPAGDLLVSNFEQIREEREL
NESLHRNVVARNQLTVSDLDEFFAQRRESFASASEALNYVKTFMGNYTMD
VAFIRGLQLYDTNMSSVLGTGAQKEYESRMRTLWQLYELQQQYVANIRVI
QGLGLLTFPADGDRIPSHLTEVLDSLDKSAHLEHMDLQDLETRVSNTSSP
QLAHIREVILKARNAYAIAMVNTSAMQEFAIRIYLSGTSEAGVRIHPLLE
DGELSEEARKRPLKLAEERALFSYARRIVDFRKRMAETVDRLQTLMQDIP
PPKRKEATTDSQAADASTVYTQTKAQMAAPAQQPEPSQEEKQSTQIQKGK
LAENGSGLGEEESGCVWSQLVQTILRKTTVQRVKFDEAVLQENTRKALEK
YARKELPHHLFACHRPEYIEGFAYRDFYPEAL*

LD21416.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:41:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19471-PA 959 GF19471-PA 27..959 27..982 3950 77.3 Plus
Dana\GF15563-PA 812 GF15563-PA 29..531 12..514 869 39.3 Plus
Dana\GF22633-PA 670 GF22633-PA 202..652 40..490 477 32.9 Plus
Dana\GF18725-PA 678 GF18725-PA 201..676 26..491 428 29.6 Plus
Dana\GF16219-PA 478 GF16219-PA 18..436 42..447 286 28.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:41:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12667-PA 984 GG12667-PA 1..984 1..982 4802 91.2 Plus
Dere\GG23820-PA 890 GG23820-PA 112..613 15..514 892 39.7 Plus
Dere\GG18934-PA 641 GG18934-PA 173..623 40..490 468 33.2 Plus
Dere\GG12040-PA 685 GG12040-PA 234..683 40..491 435 30.2 Plus
Dere\GG11985-PA 465 GG11985-PA 1..438 41..484 308 27.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17843-PA 995 GH17843-PA 10..995 15..982 3427 66.5 Plus
Dgri\GH11090-PA 817 GH11090-PA 21..527 13..514 861 39.2 Plus
Dgri\GH17781-PA 629 GH17781-PA 161..611 40..490 473 32.2 Plus
Dgri\GH18910-PA 691 GH18910-PA 251..686 49..486 405 29.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
Edem1-PD 982 CG3810-PD 1..982 1..982 5082 100 Plus
Edem1-PE 1004 CG3810-PE 1..982 1..982 5082 100 Plus
Edem1-PA 982 CG3810-PA 1..982 1..982 5082 100 Plus
Edem1-PB 982 CG3810-PB 1..982 1..982 5082 100 Plus
Edem1-PC 982 CG3810-PC 1..982 1..982 5082 100 Plus
Edem2-PB 792 CG5682-PB 23..522 15..512 861 39.6 Plus
Edem2-PA 801 CG5682-PA 23..522 15..512 861 39.6 Plus
alpha-Man-Ia-PO 667 CG42275-PO 199..645 40..486 473 33.2 Plus
alpha-Man-Ia-PN 667 CG42275-PN 199..645 40..486 473 33.2 Plus
alpha-Man-Ia-PM 667 CG42275-PM 199..645 40..486 473 33.2 Plus
alpha-Man-Ia-PL 667 CG42275-PL 199..645 40..486 473 33.2 Plus
alpha-Man-Ia-PH 667 CG32684-PG 199..645 40..486 473 33.2 Plus
alpha-Man-Ia-PJ 667 CG42275-PJ 199..645 40..486 473 33.2 Plus
alpha-Man-Ia-PI 684 CG42275-PI 214..662 38..486 472 33.1 Plus
alpha-Man-Ia-PP 643 CG42275-PP 175..621 40..486 469 33.2 Plus
alpha-Man-Ia-PK 643 CG42275-PK 175..621 40..486 469 33.2 Plus
alpha-Man-Ib-PA 685 CG11874-PA 234..683 40..491 413 29.2 Plus
alpha-Man-Ic-PA 526 CG31202-PA 70..494 40..451 285 26.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:41:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21757-PA 971 GI21757-PA 10..971 15..982 3417 65.8 Plus
Dmoj\GI17606-PA 811 GI17606-PA 42..523 34..514 848 39.2 Plus
Dmoj\GI15126-PA 656 GI15126-PA 188..638 40..490 474 32.4 Plus
Dmoj\GI23409-PA 676 GI23409-PA 236..671 49..486 406 29.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18344-PA 972 GL18344-PA 2..970 3..979 3624 70.3 Plus
Dper\GL26304-PA 804 GL26304-PA 25..526 19..514 872 39.3 Plus
Dper\GL15936-PA 667 GL15936-PA 198..649 40..490 458 32.7 Plus
Dper\GL23057-PA 675 GL23057-PA 233..668 49..486 428 30.6 Plus
Dper\GL13496-PA 482 GL13496-PA 35..477 42..493 327 27.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:41:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17701-PA 972 GA17701-PA 2..970 3..979 3613 70.1 Plus
Dpse\GA19052-PA 804 GA19052-PA 25..526 19..514 871 39.3 Plus
Dpse\GA17071-PA 461 GA17071-PA 1..443 48..490 450 32.9 Plus
Dpse\GA11250-PA 681 GA11250-PA 239..674 49..486 427 30.6 Plus
Dpse\GA16089-PA 482 GA16089-PA 35..476 42..492 319 27.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:41:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18936-PA 984 GM18936-PA 1..984 1..982 5107 96.1 Plus
Dsec\GM10224-PA 801 GM10224-PA 23..524 15..514 893 39.5 Plus
Dsec\GM11326-PA 647 GM11326-PA 140..629 1..490 480 32.3 Plus
Dsec\GM12266-PA 685 GM12266-PA 234..683 40..491 429 30 Plus
Dsec\GM12204-PA 516 GM12204-PA 70..506 40..492 278 25.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16401-PA 984 GD16401-PA 1..984 1..982 5113 96.3 Plus
Dsim\GD23871-PA 801 GD23871-PA 23..524 15..514 891 39.5 Plus
Dsim\GD17996-PA 561 GD17996-PA 110..559 40..491 428 30 Plus
Dsim\GD24646-PA 678 GD24646-PA 299..592 5..298 360 35.3 Plus
Dsim\GD17544-PA 526 GD17544-PA 70..516 40..492 291 25.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:41:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19135-PA 967 GJ19135-PA 10..967 15..982 3524 69.2 Plus
Dvir\GJ18983-PA 655 GJ18983-PA 187..637 40..490 459 32.1 Plus
Dvir\GJ10615-PA 684 GJ10615-PA 244..679 49..486 403 29.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:41:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16271-PA 968 GK16271-PA 10..968 12..982 3513 68.7 Plus
Dwil\GK14543-PA 811 GK14543-PA 20..526 14..514 856 38 Plus
Dwil\GK25495-PA 665 GK25495-PA 159..640 2..490 472 32.1 Plus
Dwil\GK22601-PA 1215 GK22601-PA 757..1209 29..486 430 29.5 Plus
Dwil\GK22601-PA 1215 GK22601-PA 217..672 29..486 428 29.6 Plus
Dwil\GK18972-PA 477 GK18972-PA 5..466 27..490 314 25.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:41:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16995-PA 985 GE16995-PA 1..985 1..982 4819 92.5 Plus
Dyak\GE18623-PA 801 GE18623-PA 23..524 15..514 890 39.5 Plus
Dyak\GE15405-PA 669 GE15405-PA 187..651 29..490 466 32.9 Plus
Dyak\GE10478-PA 674 GE10478-PA 223..672 40..491 430 29.8 Plus

LD21416.hyp Sequence

Translation from 676 to 3624

> LD21416.hyp
MQQKPRNNGYPGTLICAVLLVLLSTGVSGQKQYSKARKLELREDVRRMFQ
HAYDGYLRHASNYDELRPLTCDGHDTWGSYSLTLIDALDTLATMGNFTEF
RRAARLLEEKMDFDRDINVSVFETNIRIVGGLLSAHLLSKRAGVELEPGW
PCKGPLLRLAEDVARRLLPAFVTNTGMPYGTVNLRYGVPKGETSITCTAG
VGTFLIEFGTLSRLTGKTIYEDVAMKAVHALWAYRSPIGLFGNHIDVQSG
RWTALDSGIGAGVDSLFEYLVKASVLLNRPELLELFHEARAAIDKYMRKE
DWYVWVGMNKGRVTLPVFQSLEAFWPGILSIIGDTEPALRTISRYIGVWK
KYGFLPEFYNIAAGEASPNREVYPLRPELIESAMYLYRATGNEYLLEFGE
HMLETLEFSAKTKCGYATIRNVVTHEKENRMESFFLAETSKYLYLLFDEE
NFLHNDGSGGELLSTEDDVCVVQAGAYIFNTEAHPMDMSALHCCHAHNED
IYTSLDLQRFSPRAILERSKKRQVAVQEQWVPQCHPENNEFFNKEDESVQ
AQDSEKEQEREQSGTSTTMAVDIEVFDEFQQPAGDLLVSNFEQIREEREL
NESLHRNVVARNQLTVSDLDEFFAQRRESFASASEALNYVKTFMGNYTMD
VAFIRGLQLYDTNMSSVLGTGAQKEYESRMRTLWQLYELQQQYVANIRVI
QGLGLLTFPADGDRIPSHLTEVLDSLDKSAHLEHMDLQDLETRVSNTSSP
QLAHIREVILKARNAYAIAMVNTSAMQEFAIRIYLSGTSEAGVRIHPLLE
DGELSEEARKRPLKLAEERALFSYARRIVDFRKRMAETVDRLQTLMQDIP
PPKRKEATTDSQAADASTVYTQTKAQMAAPAQQPEPSQEEKQSTQIQKGK
LAENGSGLGEEESGCVWSQLVQTILRKTTVQRVKFDEAVLQENTRKALEK
YARKELPHHLFACHRPEYIEGFAYRDFYPEAL*

LD21416.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
Edem1-PD 982 CG3810-PD 1..982 1..982 5082 100 Plus
Edem1-PE 1004 CG3810-PE 1..982 1..982 5082 100 Plus
Edem1-PA 982 CG3810-PA 1..982 1..982 5082 100 Plus
Edem1-PB 982 CG3810-PB 1..982 1..982 5082 100 Plus
Edem1-PC 982 CG3810-PC 1..982 1..982 5082 100 Plus