BDGP Sequence Production Resources |
Search the DGRC for LD21426
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 214 |
Well: | 26 |
Vector: | pOT2 |
Associated Gene/Transcript | Cbs-RA |
Protein status: | LD21426.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1780 |
Gene | Date | Evidence |
---|---|---|
CG1753 | 2001-01-01 | Release 2 assignment |
CG1753 | 2001-09-19 | Blastp of sequenced clone |
CG1753 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1753 | 2008-04-29 | Release 5.5 accounting |
CG1753 | 2008-08-15 | Release 5.9 accounting |
CG1753 | 2008-12-18 | 5.12 accounting |
1780 bp (1780 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058508
> LD21426.complete TAGCGGTCGCTTTTCGCAGTTCGCGCTAGTTAGTCGCTCCTGGGTCACTA ATCACCAGCACTGAGATGCCACAACCGAAGCCATACGAGAGGCCCGCGGA CTTCATCGATCCCGGCAAGCCGTCCAAGTGCAAATGGCATCTGGGTACAG CCGAGAAGTCGCCCCACATCCATCGGGGCATCGCCCACCGCCAGCAGATT ACGCCCAACATCCTCGAGGTGATCGGATGCACGCCACTGGTCAAGTTGAA CAACATTCCCGCCAGCGACGGCATCGAATGCGAGATGTATGCCAAGTGCG AGTTCCTTAATCCGGGTGGATCAGTGAAGGACCGCATTGGGTACCGCATG GTGCAGGACGCCGAGGAGCAGGGCCTGCTCAAGCCAGGCTACACCATCAT CGAACCAACGTCTGGAAACACGGGCATTGGACTGGCAATGGCCTGTGCCG TTAAGGGATACAAGTGCATTATCGTGATGCCGGAGAAGATGTCCAACGAG AAGGTGTCCGCGCTGCGAACCCTCGGGGCCAAGATCATACGTACTCCAAC GGAGGCAGCCTACGATTCGCCGGAGGGACTGATCTACGTTGCTCAGCAGC TGCAGCGGGAAACGCCCAACTCGATTGTCTTGGATCAGTATCGCAACGCT GGCAATCCGCTGGCTCACTACGATGGCACTGCCGCCGAGATTCTGTGGCA GCTGGACAACAAGGTCGATATGATAGTGGTCTCGGCGGGAACGGCGGGAA CTATCAGTGGTATTGGGCGTAAGATCAAGGAGCAGGTTCCCAGTTGCCAG ATAGTCGGCGTGGATCCCTATGGCTCGATCCTTGCCCGCCCTGCTGAGCT CAACAAGACCGATGTGCAATTCTACGAGGTGGAGGGCATCGGCTACGACT TTCCGCCCACCGTATTCGATGACACCGTCGTGGATGTGTGGACGAAAATC GGCGACTCAGACTGTTTCCCCATGAGCAGACGCCTGAACGCGGAGGAGGG TCTGTTGTGCGGCGGGTCCAGTGGCGGAGCGATGCACGCTGCCCTCGAGC ATGCCCGCAAATTGAAGAAAGGCCAGCGGTGCGTGGTCATTCTGCCCGAT GGCATACGCAACTACATGACCAAGTTCGTGTCGGACAACTGGATGGAGGC GCGCAACTTCAAGGAGCCGGTAAACGAGCACGGTCACTGGTGGTGGAGCC TGGCCATCGCGGAGTTGGAGCTACCCGCTCCCCCGGTCATTCTCAAGTCG GATGCAACTGTTGGTGAGGCTATTGCCCTGATGAAGAAACACCGCGTGGA CCAGCTGCCCGTCGTGGATCAGGATGATGGTTCTGTCCTGGGCGTCGTGG GTCAGGAGACGCTGATCACGCAGATCGTGAGCATGAACCGCCAGCAGTCC GATCCCGCAATCAAGGCGCTCAACAAACGAGTAATCCGACTGAACGAATC CGAGATTCTGGGCAAGTTGGCCCGCGTCCTCGAAGTGGACCCCAGCGTGC TCATCCTGGGCAAGAACCCGGCCGGCAAGGTGGAGCTCAAAGCTCTGGCC ACCAAGCTGGACGTGACCACTTTCATTGCCGCCGGCAAGCAGAAGCCCAA GGCCAATGGCACCACCAACGGCGGCAGCCACTAAACTGGAGCGTTCTCCA GTTCCTGATCTGTGTCCTAAAAATCCAACCACCTACAGACTATGTTACGC ATTTTTAACTTATACCCGCATGCATTTTGATTATATCAAATAAAGTTTTA TCCTAAAGTATCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20912714..20913755 | 289..1330 | 5210 | 100 | Plus |
chrX | 22417052 | chrX | 20913821..20914253 | 1330..1762 | 2165 | 100 | Plus |
chrX | 22417052 | chrX | 20912344..20912569 | 63..288 | 1130 | 100 | Plus |
chrX | 22417052 | chrX | 20910444..20910506 | 1..63 | 315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 21047557..21048598 | 289..1330 | 5210 | 100 | Plus |
X | 23542271 | X | 21048664..21049099 | 1330..1765 | 2180 | 100 | Plus |
X | 23542271 | X | 21047187..21047412 | 63..288 | 1130 | 100 | Plus |
X | 23542271 | X | 21045287..21045349 | 1..63 | 315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 21032649..21033690 | 289..1330 | 5210 | 100 | Plus |
X | 23527363 | X | 21033756..21034191 | 1330..1765 | 2180 | 100 | Plus |
X | 23527363 | X | 21032279..21032504 | 63..288 | 1130 | 100 | Plus |
X | 23527363 | X | 21030379..21030441 | 1..63 | 315 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20910444..20910506 | 1..63 | 100 | -> | Plus |
chrX | 20912345..20912569 | 64..288 | 100 | -> | Plus |
chrX | 20912714..20913755 | 289..1330 | 100 | -> | Plus |
chrX | 20913822..20914253 | 1331..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1753-RB | 1..1569 | 66..1634 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1753-RB | 1..1569 | 66..1634 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cbs-RA | 1..1569 | 66..1634 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1753-RB | 1..1569 | 66..1634 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cbs-RA | 1..1569 | 66..1634 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1753-RA | 150..1911 | 1..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1753-RA | 150..1911 | 1..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cbs-RA | 150..1911 | 1..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1753-RA | 150..1911 | 1..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cbs-RA | 150..1911 | 1..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21045287..21045349 | 1..63 | 100 | -> | Plus |
X | 21047188..21047412 | 64..288 | 100 | -> | Plus |
X | 21047557..21048598 | 289..1330 | 100 | -> | Plus |
X | 21048665..21049096 | 1331..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21045287..21045349 | 1..63 | 100 | -> | Plus |
X | 21047188..21047412 | 64..288 | 100 | -> | Plus |
X | 21047557..21048598 | 289..1330 | 100 | -> | Plus |
X | 21048665..21049096 | 1331..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21045287..21045349 | 1..63 | 100 | -> | Plus |
X | 21047188..21047412 | 64..288 | 100 | -> | Plus |
X | 21047557..21048598 | 289..1330 | 100 | -> | Plus |
X | 21048665..21049096 | 1331..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20916314..20916376 | 1..63 | 100 | -> | Plus |
arm_X | 20918215..20918439 | 64..288 | 100 | -> | Plus |
arm_X | 20918584..20919625 | 289..1330 | 100 | -> | Plus |
arm_X | 20919692..20920123 | 1331..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21030379..21030441 | 1..63 | 100 | -> | Plus |
X | 21032280..21032504 | 64..288 | 100 | -> | Plus |
X | 21032649..21033690 | 289..1330 | 100 | -> | Plus |
X | 21033757..21034188 | 1331..1762 | 100 | Plus |
Translation from 65 to 1633
> LD21426.pep MPQPKPYERPADFIDPGKPSKCKWHLGTAEKSPHIHRGIAHRQQITPNIL EVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAE EQGLLKPGYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSAL RTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLA HYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVD PYGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDC FPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLKKGQRCVVILPDGIRNY MTKFVSDNWMEARNFKEPVNEHGHWWWSLAIAELELPAPPVILKSDATVG EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIK ALNKRVIRLNESEILGKLARVLEVDPSVLILGKNPAGKVELKALATKLDV TTFIAAGKQKPKANGTTNGGSH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21711-PA | 522 | GF21711-PA | 1..522 | 1..522 | 2429 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19705-PA | 522 | GG19705-PA | 1..522 | 1..522 | 2741 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22312-PA | 520 | GH22312-PA | 1..518 | 1..519 | 2201 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cbs-PC | 522 | CG1753-PC | 1..522 | 1..522 | 2734 | 100 | Plus |
Cbs-PB | 522 | CG1753-PB | 1..522 | 1..522 | 2734 | 100 | Plus |
Cbs-PA | 522 | CG1753-PA | 1..522 | 1..522 | 2734 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22982-PA | 520 | GI22982-PA | 1..520 | 1..522 | 2270 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16398-PA | 501 | GL16398-PA | 1..501 | 1..522 | 2201 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14544-PA | 524 | GA14544-PA | 1..524 | 1..522 | 2376 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23059-PA | 522 | GM23059-PA | 1..522 | 1..522 | 2734 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17507-PA | 489 | GD17507-PA | 1..488 | 1..488 | 2557 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24676-PA | 520 | GJ24676-PA | 1..520 | 1..522 | 2259 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25034-PA | 521 | GK25034-PA | 1..521 | 1..522 | 2202 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17904-PA | 567 | GE17904-PA | 46..567 | 1..522 | 2737 | 97.3 | Plus |
Translation from 65 to 1633
> LD21426.hyp MPQPKPYERPADFIDPGKPSKCKWHLGTAEKSPHIHRGIAHRQQITPNIL EVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAE EQGLLKPGYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSAL RTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLA HYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVD PYGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDC FPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLKKGQRCVVILPDGIRNY MTKFVSDNWMEARNFKEPVNEHGHWWWSLAIAELELPAPPVILKSDATVG EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIK ALNKRVIRLNESEILGKLARVLEVDPSVLILGKNPAGKVELKALATKLDV TTFIAAGKQKPKANGTTNGGSH*