Clone LD21442 Report

Search the DGRC for LD21442

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:214
Well:42
Vector:pOT2
Associated Gene/Transcriptscaf6-RA
Protein status:LD21442.pep: gold
Sequenced Size:3054

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
scaf6 2008-04-29 Release 5.5 accounting
scaf6 2008-04-29 Picked prior to 5.5
scaf6 2008-08-15 Release 5.9 accounting
scaf6 2008-12-18 5.12 accounting

Clone Sequence Records

LD21442.complete Sequence

3054 bp assembled on 2007-10-25

GenBank Submission: BT031129

> LD21442.complete
TGAAAAGTGCCGCTGAAAAAGTGCAAAAAGTTATGAATTTAGTATTTTAC
ATAGGATAATAGTGCTAATAACAGTCGCAAAATGGACGTGCAACCGCCAC
GCGATGCCAGTTTACGAAATATTATCGACAAACTGGCGGAGTTTGTGGCC
AGAAATGGGCCGGAATTCGAGGCGATAACCAAGCAGAAGCAGCAGAACAA
TCCAAAGTTCGAGTTCCTCTACGGCGGGGAGTTCGCCAACTATTATCAAT
TCAGGGTGGCAGCGGAACAAGCTCTGCTAAAGCAACAGGCCATTAACCAA
CAACTGCCACCAGGTGCTCCATCCGGCCACTACATGCAACATCCGCCGCC
AATGCAGCAATCCCAACCACCGGGCCTCTATCCGCCACCCAATCAGCAGC
CACCGCACCCGCCCGAAACCGCACAAGACAATATGCAACAGCAAACACAG
CACTCCTGGCCGCCGAACTCCGGCAACGGTGGGCCGCCAAACAATCAGCA
GGCCAATGGCAATCCCATGGCCATGAATCTAACGTCACAACTGGAAGCCA
TCAAGATGCAGCAGAAGTCGCTGCGGGAACAGATCCAGCAATCCGAAGCG
AATCTCTCCGCACAGCACACGGCCCTGATGAATCAGAAGACCAAGCAGAT
CGAGGATGCAATTGCGGCGGCGCAGACGGCGCAGCAGGAACAGATGGCTG
GCGAACAGGGCATTGTGCTGAGGGACTTCGATGGCGTTCTGCAGCCGATC
ATCGAGTCCTGCACGAAGGACAGCATCTCTGCAGGCAAGAACTGGATTTT
ACAGCATTCAACCGACAGCGCAAAAATCAATGTCGTTTTACAATATCTTT
TAAAGAAGGCTTTGGTCAATGGTTCAACGTTTCAGCAAAAATTGCATCTT
ATATATTTAGTTAATGATATACTCCATCACTGCATGCGCAAGAACATCAA
TGACTTGAAGAACAGCCTCGAGAACGTCGTCATTCCGATGTTCTGCAGCG
CCGACTTGATTGGCAACCCCGACCAGCGCCAGAAGCTAGCCAAGCTGCTG
TCTCTGTGGGAGTCCAAGGCGAAGTTCTTCGATGCCTGCGTCATCTCGAA
GCTTCAGTCACCGGACTCGTCAATGCAGGAGTACAAAACCAATCTGCAGA
ACACACATCATGATATAACTGCTAAATTCACGCAGAATACCAAGGCGACT
TTGGATAACTATCAGAAACAGCATCATGTATTTATCCAACATGCTAGCCA
GCAAATTGTGCAGCTGGAGAAACAGGCGCAGCACCTGGAGCAGCAGATTG
TGGCCCAGAAGTCCCAGCAGCAACACATGCTTCAGCATCAGCAGAAGAAC
ATACCATCGCTGATGTCCCACCGAATAGCAATGCCGGGTGACCATGAGCA
CATGAATAGCCAGGGGCCGCATGATCAGCAGCATCCGCAGGCGGGAAATA
ATATGTATCCAGGTGGTAACTTCCAACAGCAGCAGCCACCACCGGGGAAT
CACTTTGCGGATCCACGCGGACCGAACTTCTTCATTCCGGACATGTCCAA
ACCACCACCAGGCTTCCCCGGACCCATGCATCATAATCAGGGCCCAGCAA
TGGGCCAGCAGCAGCCACAACCGGGACAGTTTCCGCCCATGCAGGCGCCG
GGTTCTGGCAATGAACCACCTGTTGATCTTGGCGTTCTCAGTGCAGCGAT
TCAGGCGTGCTTACAGATGCAGCAGCAACACCATCCTGACGACCCTCAGC
AACAAGGACAGCACCAACTGCAGCAGCAGCAGCAGCAACAACCGCAGCAG
CAAAAGCAGCCGCCGCCAATGGCTGCCTATCCCCAGAATATTGTTAGACC
TGGCCAGCAAAATGCTGATAGCAGCGAAGTGGATCTGGATGTGCTCAATG
CAGCCATTCGCGCGGTTATAACCAACAAACCCGAAGACGGAACATTGGAA
GATGGCCAGCAACCACAGAAATTGGTCGACGGAGAATCTGGAGAACCTGT
TGTGATCGGAGAGCCACAAATACCCACAGCGCCTTACTACGACCTGCCAG
CGGGCCTCATGGTGCCGCTCATTCGTCTGGAGGATTACAACTACAAAGCC
CTCGATCCGGCGGACATTCGACTGCCAGCTCCAGCGCCACAAAGCGAGCG
ATTAACAAATGCATTGAACGCCTTCTATTCCGCACCCTCACACGATCGTC
CAAGGGATAATGAGGGTTGGGAGAAGCTTGGTCTCTATGAGTACTATAAG
GTGAAGAATGCGGCGCGAAAGCAAAAAGAAGAGGAAATCAAGGACGGCAT
TCGAGAAAAGTCGCGGTCGCCAAGTCCGATTGTGCTCGAGAAACCCCTAC
CCAAAAAGAGCAACAAGCGAGTTTATCGATCCAAGAGTCGCAGTCGCTCC
CGCTCAAAAACGCCGCCCCATCGAGATAGATCGTTGTCTCGCTCCCGATC
CCGCTCGCGATCCATGGAGCGCTCTTTAACGCCGCCACCGATGAATCGGA
GCAGGTTGGGCGGTGGTAACAACCGCAAGGGTCGCAATCGATCTCCTCGC
CACGAACGGGACAACAACAGCGGCAGCACAAATACCAGAGAGGGCCGTGG
TGATCGTGGCAATTCCAATAGCCGAGACAATGGCAACAGCACCAACCTAA
GACGAGTGGACCGCGACAGATCTCTAACACCTCCGAGCTTTCTGGGAAGC
ACATTTGCCAAGCCAGCGGATTTCATCGAGGAATCGAACAAGGGCCACCA
AATGCTCATGAAAATGGGTTGGGCGGGCACGGGAACTGGACTGGGCTCAA
AGAATCAAGGCATCGACACGCCCATTTCGGGAGGCGAGGTGCGCGATCGT
CGAGAGATGTACAAGGGAGTGGGCGCTAATATGCACGATCCCTTCGAGAG
CTTTCGGAAGAACAAAGGAGCTGCCTTCGCGCACCGGATGCGATCGCGAG
ACGACAAGAGTTAGGATCTGCCAACGGTCATAACTTCCCAGTTTTTTGTT
TCCTTTAGCCCAGAAAATATACATTTTTATAAAATAAAAAAAAAAAAAAA
AAAA

LD21442.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
scaf6-RA 3200 scaf6-RA 164..3197 1..3034 15170 100 Plus
scaf6.b 1142 scaf6.b 20..804 1..785 3925 100 Plus
scaf6.d 949 scaf6.d 20..803 1..784 3920 100 Plus
scaf6.b 1142 scaf6.b 804..1142 858..1196 1695 100 Plus
scaf6.d 949 scaf6.d 803..949 932..1078 735 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:34:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17027374..17028375 2210..1209 4995 99.9 Minus
chr3L 24539361 chr3L 17031157..17031504 622..275 1680 98.9 Minus
chr3L 24539361 chr3L 17026762..17027078 2694..2378 1585 100 Minus
chr3L 24539361 chr3L 17028438..17028636 1208..1010 995 100 Minus
chr3L 24539361 chr3L 17031567..17031738 274..103 860 100 Minus
chr3L 24539361 chr3L 17026526..17026698 2866..2694 850 99.4 Minus
chr3L 24539361 chr3L 17026305..17026475 3034..2864 825 98.8 Minus
chr3L 24539361 chr3L 17027149..17027316 2378..2211 825 99.4 Minus
chr3L 24539361 chr3L 17029889..17030053 785..621 810 99.4 Minus
chr3L 24539361 chr3L 17031902..17032004 103..1 515 100 Minus
chr3L 24539361 chr3L 17028700..17028777 1009..932 390 100 Minus
chr3L 24539361 chr3L 17029588..17029663 858..783 380 100 Minus
chr3L 24539361 chr3L 17028999..17029073 932..858 375 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:09:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:34:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17037931..17038932 2210..1209 5010 100 Minus
3L 28110227 3L 17041693..17042040 622..275 1740 100 Minus
3L 28110227 3L 17037319..17037635 2694..2378 1585 100 Minus
3L 28110227 3L 17038995..17039193 1208..1010 995 100 Minus
3L 28110227 3L 17037083..17037255 2866..2694 865 100 Minus
3L 28110227 3L 17042103..17042274 274..103 860 100 Minus
3L 28110227 3L 17036862..17037032 3034..2864 855 100 Minus
3L 28110227 3L 17037706..17037873 2378..2211 840 100 Minus
3L 28110227 3L 17040438..17040602 785..621 825 100 Minus
3L 28110227 3L 17042438..17042540 103..1 515 100 Minus
3L 28110227 3L 17039257..17039334 1009..932 390 100 Minus
3L 28110227 3L 17040137..17040212 858..783 380 100 Minus
3L 28110227 3L 17039556..17039630 932..858 375 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:31:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 17031031..17032032 2210..1209 5010 100 Minus
3L 28103327 3L 17034793..17035140 622..275 1740 100 Minus
3L 28103327 3L 17030419..17030735 2694..2378 1585 100 Minus
3L 28103327 3L 17032095..17032293 1208..1010 995 100 Minus
3L 28103327 3L 17030183..17030355 2866..2694 865 100 Minus
3L 28103327 3L 17035203..17035374 274..103 860 100 Minus
3L 28103327 3L 17029962..17030132 3034..2864 855 100 Minus
3L 28103327 3L 17030806..17030973 2378..2211 840 100 Minus
3L 28103327 3L 17033538..17033702 785..621 825 100 Minus
3L 28103327 3L 17035538..17035640 103..1 515 100 Minus
3L 28103327 3L 17032357..17032434 1009..932 390 100 Minus
3L 28103327 3L 17033237..17033312 858..783 380 100 Minus
3L 28103327 3L 17032656..17032730 932..858 375 100 Minus
Blast to na_te.dros performed 2019-03-16 04:34:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6650..6815 1655..1816 244 62.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6733..6836 1713..1816 241 70.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6844..6978 1713..1848 237 65.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6766..6880 1713..1828 235 68.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2418 1720..1813 227 71.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6826..6923 1713..1810 220 69.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6811..6900 1719..1808 216 71.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2345..2442 1713..1810 211 68.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6787..6884 1713..1813 210 69.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2839 1261..1811 209 55.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6745..6848 1713..1816 205 66.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2400..2482 1720..1802 190 69.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2454..2539 1714..1805 177 68.5 Plus
roo 9092 roo DM_ROO 9092bp 1061..1152 1261..1351 151 64.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6888 1261..1351 142 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2842..2937 1715..1810 138 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6872 1211..1354 137 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2776..2883 1712..1810 134 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6856 1306..1440 119 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2588..2706 1260..1381 117 60 Plus
roo 9092 roo DM_ROO 9092bp 1060..1149 1236..1325 117 58.9 Plus

LD21442.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:35:37 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17027149..17027316 2211..2378 99 <- Minus
chr3L 17026304..17026473 2866..3035 98 <- Minus
chr3L 17026527..17026698 2694..2865 99 <- Minus
chr3L 17026763..17027077 2379..2693 100 <- Minus
chr3L 17027374..17027773 1811..2210 100 == Minus
chr3L 17027827..17028375 1209..1757 100 <- Minus
chr3L 17028438..17028636 1010..1208 100 <- Minus
chr3L 17028700..17028776 933..1009 100 <- Minus
chr3L 17028999..17029073 858..932 100 <- Minus
chr3L 17029589..17029661 785..857 100 <- Minus
chr3L 17029890..17030052 622..784 99 <- Minus
chr3L 17031158..17031504 275..621 98 <- Minus
chr3L 17031567..17031737 104..274 100 <- Minus
chr3L 17031902..17032004 1..103 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:56:08 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
scaf6-RA 1..2883 82..2964 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:04:20 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
scaf6-RA 1..2883 82..2964 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:34:38 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
scaf6-RA 1..2883 82..2964 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:50:27 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
scaf6-RA 1..2883 82..2964 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:44:13 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
scaf6-RA 1..2883 82..2964 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:56:04 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
scaf6-RA 20..3053 1..3035 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:04:20 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
scaf6-RA 20..3049 1..3030 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:34:38 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
scaf6-RA 35..3068 1..3035 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:50:27 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
scaf6-RA 20..3053 1..3035 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:44:13 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
scaf6-RA 35..3068 1..3035 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:35:37 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17040138..17040210 785..857 100 <- Minus
3L 17040439..17040601 622..784 100 <- Minus
3L 17041694..17042040 275..621 100 <- Minus
3L 17042103..17042273 104..274 100 <- Minus
3L 17042438..17042540 1..103 100   Minus
3L 17036861..17037030 2866..3035 99 <- Minus
3L 17037084..17037255 2694..2865 100 <- Minus
3L 17037320..17037634 2379..2693 100 <- Minus
3L 17037706..17037873 2211..2378 100 <- Minus
3L 17037931..17038932 1209..2210 100 <- Minus
3L 17038995..17039193 1010..1208 100 <- Minus
3L 17039257..17039333 933..1009 100 <- Minus
3L 17039556..17039630 858..932 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:35:37 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17040138..17040210 785..857 100 <- Minus
3L 17040439..17040601 622..784 100 <- Minus
3L 17041694..17042040 275..621 100 <- Minus
3L 17042103..17042273 104..274 100 <- Minus
3L 17042438..17042540 1..103 100   Minus
3L 17036861..17037030 2866..3035 99 <- Minus
3L 17037084..17037255 2694..2865 100 <- Minus
3L 17037320..17037634 2379..2693 100 <- Minus
3L 17037706..17037873 2211..2378 100 <- Minus
3L 17037931..17038932 1209..2210 100 <- Minus
3L 17038995..17039193 1010..1208 100 <- Minus
3L 17039257..17039333 933..1009 100 <- Minus
3L 17039556..17039630 858..932 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:35:37 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17040138..17040210 785..857 100 <- Minus
3L 17040439..17040601 622..784 100 <- Minus
3L 17041694..17042040 275..621 100 <- Minus
3L 17042103..17042273 104..274 100 <- Minus
3L 17042438..17042540 1..103 100   Minus
3L 17036861..17037030 2866..3035 99 <- Minus
3L 17037084..17037255 2694..2865 100 <- Minus
3L 17037320..17037634 2379..2693 100 <- Minus
3L 17037706..17037873 2211..2378 100 <- Minus
3L 17037931..17038932 1209..2210 100 <- Minus
3L 17038995..17039193 1010..1208 100 <- Minus
3L 17039257..17039333 933..1009 100 <- Minus
3L 17039556..17039630 858..932 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:34:38 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17029961..17030130 2866..3035 99 <- Minus
arm_3L 17030184..17030355 2694..2865 100 <- Minus
arm_3L 17030420..17030734 2379..2693 100 <- Minus
arm_3L 17030806..17030973 2211..2378 100 <- Minus
arm_3L 17031031..17032032 1209..2210 100 <- Minus
arm_3L 17032095..17032293 1010..1208 100 <- Minus
arm_3L 17032357..17032433 933..1009 100 <- Minus
arm_3L 17032656..17032730 858..932 100 <- Minus
arm_3L 17033238..17033310 785..857 100 <- Minus
arm_3L 17033539..17033701 622..784 100 <- Minus
arm_3L 17034794..17035140 275..621 100 <- Minus
arm_3L 17035203..17035373 104..274 100 <- Minus
arm_3L 17035538..17035640 1..103 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:56:25 Download gff for LD21442.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17030420..17030734 2379..2693 100 <- Minus
3L 17030806..17030973 2211..2378 100 <- Minus
3L 17031031..17032032 1209..2210 100 <- Minus
3L 17032095..17032293 1010..1208 100 <- Minus
3L 17032357..17032433 933..1009 100 <- Minus
3L 17032656..17032730 858..932 100 <- Minus
3L 17033238..17033310 785..857 100 <- Minus
3L 17033539..17033701 622..784 100 <- Minus
3L 17034794..17035140 275..621 100 <- Minus
3L 17035203..17035373 104..274 100 <- Minus
3L 17035538..17035640 1..103 100   Minus
3L 17029961..17030130 2866..3035 99 <- Minus
3L 17030184..17030355 2694..2865 100 <- Minus

LD21442.pep Sequence

Translation from 81 to 2963

> LD21442.pep
MDVQPPRDASLRNIIDKLAEFVARNGPEFEAITKQKQQNNPKFEFLYGGE
FANYYQFRVAAEQALLKQQAINQQLPPGAPSGHYMQHPPPMQQSQPPGLY
PPPNQQPPHPPETAQDNMQQQTQHSWPPNSGNGGPPNNQQANGNPMAMNL
TSQLEAIKMQQKSLREQIQQSEANLSAQHTALMNQKTKQIEDAIAAAQTA
QQEQMAGEQGIVLRDFDGVLQPIIESCTKDSISAGKNWILQHSTDSAKIN
VVLQYLLKKALVNGSTFQQKLHLIYLVNDILHHCMRKNINDLKNSLENVV
IPMFCSADLIGNPDQRQKLAKLLSLWESKAKFFDACVISKLQSPDSSMQE
YKTNLQNTHHDITAKFTQNTKATLDNYQKQHHVFIQHASQQIVQLEKQAQ
HLEQQIVAQKSQQQHMLQHQQKNIPSLMSHRIAMPGDHEHMNSQGPHDQQ
HPQAGNNMYPGGNFQQQQPPPGNHFADPRGPNFFIPDMSKPPPGFPGPMH
HNQGPAMGQQQPQPGQFPPMQAPGSGNEPPVDLGVLSAAIQACLQMQQQH
HPDDPQQQGQHQLQQQQQQQPQQQKQPPPMAAYPQNIVRPGQQNADSSEV
DLDVLNAAIRAVITNKPEDGTLEDGQQPQKLVDGESGEPVVIGEPQIPTA
PYYDLPAGLMVPLIRLEDYNYKALDPADIRLPAPAPQSERLTNALNAFYS
APSHDRPRDNEGWEKLGLYEYYKVKNAARKQKEEEIKDGIREKSRSPSPI
VLEKPLPKKSNKRVYRSKSRSRSRSKTPPHRDRSLSRSRSRSRSMERSLT
PPPMNRSRLGGGNNRKGRNRSPRHERDNNSGSTNTREGRGDRGNSNSRDN
GNSTNLRRVDRDRSLTPPSFLGSTFAKPADFIEESNKGHQMLMKMGWAGT
GTGLGSKNQGIDTPISGGEVRDRREMYKGVGANMHDPFESFRKNKGAAFA
HRMRSRDDKS*

LD21442.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:43:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24403-PA 979 GF24403-PA 1..979 1..960 3077 73.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:43:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15832-PA 953 GG15832-PA 1..953 1..960 4091 92.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:43:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15948-PA 1039 GH15948-PA 1..598 1..543 1792 65.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
scaf6-PA 960 CG33522-PA 1..960 1..960 5103 100 Plus
scaf6-PE 251 CG33522-PE 1..235 1..235 1239 100 Plus
scaf6-PC 182 CG33522-PC 1..182 1..182 972 98.9 Plus
Ptip-PA 2294 CG32133-PA 365..872 64..595 210 23.8 Plus
Ptip-PA 2294 CG32133-PA 802..1345 59..585 201 21.8 Plus
kto-PA 2531 CG8491-PA 1962..2214 390..639 187 29.1 Plus
fs(1)h-PB 2038 CG2252-PB 1374..1811 375..855 175 22.2 Plus
fs(1)h-PG 2046 CG2252-PG 1382..1819 375..855 175 22.2 Plus
CG12964-PB 1129 CG12964-PB 396..623 379..630 172 27.8 Plus
CG12964-PC 1129 CG12964-PC 396..623 379..630 172 27.8 Plus
Smr-PG 3607 CG4013-PG 24..290 343..613 165 25.8 Plus
Smr-PF 3601 CG4013-PF 24..241 343..576 162 28 Plus
Smr-PE 3601 CG4013-PE 24..241 343..576 162 28 Plus
Smr-PD 3601 CG4013-PD 24..241 343..576 162 28 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16600-PA 987 GI16600-PA 1..987 1..960 2812 67.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:43:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16064-PA 1001 GL16064-PA 1..1001 1..960 3358 74 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:43:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28475-PA 1001 GA28475-PA 1..1001 1..960 3369 74.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24352-PA 210 GM24352-PA 1..49 1..49 267 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:43:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12428-PA 965 GD12428-PA 1..965 1..960 4950 96.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:43:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12853-PA 992 GJ12853-PA 1..992 1..960 2966 67.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:43:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20430-PA 1022 GK20430-PA 1..1022 1..960 2812 66.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:43:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22172-PA 960 GE22172-PA 1..960 1..960 4046 91.9 Plus

LD21442.hyp Sequence

Translation from 81 to 2963

> LD21442.hyp
MDVQPPRDASLRNIIDKLAEFVARNGPEFEAITKQKQQNNPKFEFLYGGE
FANYYQFRVAAEQALLKQQAINQQLPPGAPSGHYMQHPPPMQQSQPPGLY
PPPNQQPPHPPETAQDNMQQQTQHSWPPNSGNGGPPNNQQANGNPMAMNL
TSQLEAIKMQQKSLREQIQQSEANLSAQHTALMNQKTKQIEDAIAAAQTA
QQEQMAGEQGIVLRDFDGVLQPIIESCTKDSISAGKNWILQHSTDSAKIN
VVLQYLLKKALVNGSTFQQKLHLIYLVNDILHHCMRKNINDLKNSLENVV
IPMFCSADLIGNPDQRQKLAKLLSLWESKAKFFDACVISKLQSPDSSMQE
YKTNLQNTHHDITAKFTQNTKATLDNYQKQHHVFIQHASQQIVQLEKQAQ
HLEQQIVAQKSQQQHMLQHQQKNIPSLMSHRIAMPGDHEHMNSQGPHDQQ
HPQAGNNMYPGGNFQQQQPPPGNHFADPRGPNFFIPDMSKPPPGFPGPMH
HNQGPAMGQQQPQPGQFPPMQAPGSGNEPPVDLGVLSAAIQACLQMQQQH
HPDDPQQQGQHQLQQQQQQQPQQQKQPPPMAAYPQNIVRPGQQNADSSEV
DLDVLNAAIRAVITNKPEDGTLEDGQQPQKLVDGESGEPVVIGEPQIPTA
PYYDLPAGLMVPLIRLEDYNYKALDPADIRLPAPAPQSERLTNALNAFYS
APSHDRPRDNEGWEKLGLYEYYKVKNAARKQKEEEIKDGIREKSRSPSPI
VLEKPLPKKSNKRVYRSKSRSRSRSKTPPHRDRSLSRSRSRSRSMERSLT
PPPMNRSRLGGGNNRKGRNRSPRHERDNNSGSTNTREGRGDRGNSNSRDN
GNSTNLRRVDRDRSLTPPSFLGSTFAKPADFIEESNKGHQMLMKMGWAGT
GTGLGSKNQGIDTPISGGEVRDRREMYKGVGANMHDPFESFRKNKGAAFA
HRMRSRDDKS*

LD21442.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
scaf6-PA 960 CG33522-PA 1..960 1..960 5103 100 Plus
scaf6-PE 251 CG33522-PE 1..235 1..235 1239 100 Plus
scaf6-PC 182 CG33522-PC 1..182 1..182 972 98.9 Plus
ptip-PA 2294 CG32133-PA 365..872 64..595 210 23.8 Plus
ptip-PA 2294 CG32133-PA 802..1345 59..585 201 21.8 Plus
kto-PA 2531 CG8491-PA 1962..2214 390..639 187 29.1 Plus