BDGP Sequence Production Resources |
Search the DGRC for LD21606
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 216 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9114-RA |
Protein status: | LD21606.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2151 |
Gene | Date | Evidence |
---|---|---|
CG9114 | 2001-01-01 | Release 2 assignment |
CG9114 | 2001-09-19 | Blastp of sequenced clone |
CG9114 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9114 | 2008-04-29 | Release 5.5 accounting |
CG9114 | 2008-08-15 | Release 5.9 accounting |
CG9114 | 2008-12-18 | 5.12 accounting |
2151 bp (2151 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058509
> LD21606.complete CCACATCCATCTTGTGGCTTCCGCATCCATGCTGCCGTTTGTCCAGGAGA ATGTGCCGGAGATGCTGCTCCAGCCGGCCCGGTTGGCCTTCTGCGCCAAT CTTCACGTGGGCCGACCGCGGGATGACCCCACTACATTGGTTTTAGCGAG AAACCTAAAGTTCTACGAATTCCGGCGCAAGGATCTGGTGCACTACATCG ATTTGAAGGTCACGAAACTAAAGCAAATAGCCACCCAACTGGAGGCCTAC GACGGACCGGTTTGTCCCTTTCTGTCCAAGCAGGAACCCACTGACGAAAA GGTGGACTGGAGCATGCTGGATCCGCCGGAGGATTTGCCCCTCAAATTTG GAAAGTTTGTGTGGCAACGGGAGGGCATCTACCTGTTAATTCAGTGCTGG AAGCATCTCGTCGTCCTAAAGAGGCCCAAGGATCACGGGGCCAACTTCGA ACTGGTGGCGGATCACAAGGATGTGGTGGACTACCAGATGGTCGAAGGTC CCATTTCCTTCCAGGCCGTTGTGGAACTGGAGTTCGGCAATGGCAAGCGT CAGCGTTGTGATTTCCAGGAGGATTTCTTAAATGAGGAGCCCAGCACGTC CAAAAATGCGGGCTTGCCCGCGAAGGATTTCGAGAACCTGCTGCAGGAGG TGCACCGCGCCCAAGCCGAGCTCGACAGCCAGCGAATGCAAAACCAGAAG GAATTAGCCCACGTCCAAGACCTTCTATACTTCGGCACGCCGGGCCAGCG TTCGCTGCTCCTTGAGGAGAAGCAGCCGCTCCGACGACTCGGCGATGTAT GGACTCGGATCTGCGGCGATTATTTTGTTTGTGGCACTCTGCTAGTCAAC ATAACTGGCACCAATCGCCTCACCATAGTCAAGGAGTTGTATCCGATTGT TGTAATCGAACCACACACCGACTTTAGCGTGGAGCACCGCCTGTACGAGC TGCCTCTGCAGGCGGATGGCCAACCACCCGAGGACTACGACCAGCTGGCG CAGTTTTGGGCCTGCCAGGATCAGCATAGCAGGCGTCTCAAATGGCGACC GGTGGAGAAGGAAAGAATACTACCGCCGGAACGATCTGCCGCGATGGTAG TGAGCCTGCGTCTGGTCGATCTTCTTGAGGCAGAGAAACTCATATTGATG GCAACGTACGAGATGGGCGAGGATGCATCCCCTAGGCAAATCCATCTCAT TACCTTCGATGTGAAGAAACTGCTCGATAAAACAGAATCGTTGGCACCCA CATTTTCGCCCGCCACGCTGCACCAAGACTTTTTGGCCGTTATTATGACG CACACGGCACGTTGCTCCCTGAAATTGGAGTTCCAGTCGGCCCAGGATTG CACGACATTCGAGCAGCTACTCGTCTCCACGCTGCAGTTTCAGTTGATCC AAGCCCAGGAAGCAAACAAGGAGCCGACTTCCGACTTGCTGGACGACAGT GAGCCTGGGTCTCACTTTCAGTCTTCCAACATCGCCGCCGATCCTGTCCA GCGTATTTTCTACAATCGCCAGCCGCAGTCACAGTGGTGTGACACCTTGC TGCTTCGCGACGATCCCGGAAAGCATTGGCATGTGTACGCCAGAACGGAC GATCGATTGCGTCTGCTACTGCATCGCCTGACGCGCGATCTCCTCCAGCT GCACTGCAACCTCAATGTGCTAGAGGTCGCTGAGCACAACATGTCGCCTG CCGACATGGAGATGGAGTTGCTAAACAGTCTGTTCGAGGAGATGGACGCC TGGAAGGTTTTGAGTGAGCCGGCAGCCAGTGTGGAGCAGCGCCGGGAGCA GCTGACGCAGCTCCACAAGGCACAAATGGCCAGCGATGTGTTGGCTTCTA TGCTATTCACCGATGATGATGATGACAATGGGGCGTAAATGCGTTTTTTT TTTCTTCTCTTTGCATTGGAAAATCTACAAAGTTGATATTTTGTATGTAA ATGCTTTGTTAACAATGTGTTTTTTGCATTGTATATTTTTATAAAAACAT TTTGTTGTATTGCATTCTTGTCAGAGTTGTAAGTTTACAAATTAAAGCAT TTACGCGAATGTTAAAGCACATGGGAAAAGGAAGAAGGATATAATAAATG CATGACTCGGTTGTGTCATTTTGTCACGATTAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 941..1120 | 2044..1863 | 131 | 55.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15220718..15221424 | 1428..2131 | 99 | <- | Minus |
chrX | 15221481..15222907 | 1..1427 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9114-RA | 1..1860 | 29..1888 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9114-RA | 1..1860 | 29..1888 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9114-RA | 1..1860 | 29..1888 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9114-RA | 1..1860 | 29..1888 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9114-RA | 1..1860 | 29..1888 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9114-RA | 471..2601 | 1..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9114-RA | 471..2601 | 1..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9114-RA | 32..2162 | 1..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9114-RA | 471..2601 | 1..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9114-RA | 185..2315 | 1..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15330784..15331487 | 1428..2131 | 100 | <- | Minus |
X | 15331544..15332970 | 1..1427 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15330784..15331487 | 1428..2131 | 100 | <- | Minus |
X | 15331544..15332970 | 1..1427 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15330784..15331487 | 1428..2131 | 100 | <- | Minus |
X | 15331544..15332970 | 1..1427 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15224817..15225520 | 1428..2131 | 100 | <- | Minus |
arm_X | 15225577..15227003 | 1..1427 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15338882..15339585 | 1428..2131 | 100 | <- | Minus |
X | 15339642..15341068 | 1..1427 | 100 | Minus |
Translation from 0 to 1887
> LD21606.hyp HIHLVASASMLPFVQENVPEMLLQPARLAFCANLHVGRPRDDPTTLVLAR NLKFYEFRRKDLVHYIDLKVTKLKQIATQLEAYDGPVCPFLSKQEPTDEK VDWSMLDPPEDLPLKFGKFVWQREGIYLLIQCWKHLVVLKRPKDHGANFE LVADHKDVVDYQMVEGPISFQAVVELEFGNGKRQRCDFQEDFLNEEPSTS KNAGLPAKDFENLLQEVHRAQAELDSQRMQNQKELAHVQDLLYFGTPGQR SLLLEEKQPLRRLGDVWTRICGDYFVCGTLLVNITGTNRLTIVKELYPIV VIEPHTDFSVEHRLYELPLQADGQPPEDYDQLAQFWACQDQHSRRLKWRP VEKERILPPERSAAMVVSLRLVDLLEAEKLILMATYEMGEDASPRQIHLI TFDVKKLLDKTESLAPTFSPATLHQDFLAVIMTHTARCSLKLEFQSAQDC TTFEQLLVSTLQFQLIQAQEANKEPTSDLLDDSEPGSHFQSSNIAADPVQ RIFYNRQPQSQWCDTLLLRDDPGKHWHVYARTDDRLRLLLHRLTRDLLQL HCNLNVLEVAEHNMSPADMEMELLNSLFEEMDAWKVLSEPAASVEQRREQ LTQLHKAQMASDVLASMLFTDDDDDNGA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9114-PA | 619 | CG9114-PA | 1..619 | 10..628 | 3250 | 100 | Plus |
Translation from 28 to 1887
> LD21606.pep MLPFVQENVPEMLLQPARLAFCANLHVGRPRDDPTTLVLARNLKFYEFRR KDLVHYIDLKVTKLKQIATQLEAYDGPVCPFLSKQEPTDEKVDWSMLDPP EDLPLKFGKFVWQREGIYLLIQCWKHLVVLKRPKDHGANFELVADHKDVV DYQMVEGPISFQAVVELEFGNGKRQRCDFQEDFLNEEPSTSKNAGLPAKD FENLLQEVHRAQAELDSQRMQNQKELAHVQDLLYFGTPGQRSLLLEEKQP LRRLGDVWTRICGDYFVCGTLLVNITGTNRLTIVKELYPIVVIEPHTDFS VEHRLYELPLQADGQPPEDYDQLAQFWACQDQHSRRLKWRPVEKERILPP ERSAAMVVSLRLVDLLEAEKLILMATYEMGEDASPRQIHLITFDVKKLLD KTESLAPTFSPATLHQDFLAVIMTHTARCSLKLEFQSAQDCTTFEQLLVS TLQFQLIQAQEANKEPTSDLLDDSEPGSHFQSSNIAADPVQRIFYNRQPQ SQWCDTLLLRDDPGKHWHVYARTDDRLRLLLHRLTRDLLQLHCNLNVLEV AEHNMSPADMEMELLNSLFEEMDAWKVLSEPAASVEQRREQLTQLHKAQM ASDVLASMLFTDDDDDNGA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21045-PA | 641 | GF21045-PA | 1..631 | 1..609 | 1656 | 50.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19408-PA | 616 | GG19408-PA | 1..614 | 1..614 | 2955 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24479-PA | 633 | GH24479-PA | 1..631 | 1..609 | 1116 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9114-PA | 619 | CG9114-PA | 1..619 | 1..619 | 3250 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11218-PA | 617 | GI11218-PA | 1..610 | 1..611 | 1334 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14747-PA | 642 | GL14747-PA | 1..641 | 1..616 | 1663 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21552-PA | 642 | GA21552-PA | 1..641 | 1..616 | 1676 | 56.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10978-PA | 622 | GM10978-PA | 1..611 | 1..611 | 3005 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15810-PA | 619 | GD15810-PA | 1..619 | 1..619 | 3062 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16860-PA | 628 | GJ16860-PA | 1..617 | 1..607 | 1272 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19854-PA | 669 | GK19854-PA | 1..658 | 1..609 | 1213 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16056-PA | 617 | GE16056-PA | 1..615 | 1..614 | 2914 | 88.1 | Plus |