BDGP Sequence Production Resources |
Search the DGRC for LD21610
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 216 |
Well: | 10 |
Vector: | pOT2 |
Associated Gene/Transcript | Atac1-RA |
Protein status: | LD21610.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1196 |
Gene | Date | Evidence |
---|---|---|
CG9200 | 2001-01-01 | Release 2 assignment |
CG9200 | 2002-05-16 | Blastp of sequenced clone |
CG9200 | 2003-01-01 | Sim4 clustering to Release 3 |
Atac1 | 2008-04-29 | Release 5.5 accounting |
Atac1 | 2008-08-15 | Release 5.9 accounting |
Atac1 | 2008-12-18 | 5.12 accounting |
1196 bp (1196 high quality bases) assembled on 2002-05-16
GenBank Submission: AY118911
> LD21610.complete GTATTTGGTGCTAATTCTTTGTAATGGAAATAGCAGAGATATCTGCAGAA GATGAGGATGTGTTTCACTTTGAGACCGAGCACCTGGCCCTGCGTGGCAA CCAGTGCTATACCAATTTGCTGCGCACTTTGGCCGTGCTGCAGGCACAAA GGATTCGGGTGCATCAGCAGATTGAGGAATTGGAAGCCACACAAAATATC TACTTGGAGAATCCGCAACATATGCTGGACAAACTGCGAAACAACGAGCC TTTGATAGCGGATAATTACATCACCACGACCGTTCTACCGGACTTGCCAA CTCTGTCGCCCAATGACGAGGAAGGGGGCACAAATGAGACACCGACCGAT GCGTCTTCATGGACGCAAGAGGCGAACAAGAATCGGGACAGGAGCAATGG ACGGTCGGAGAATTTCAATCGCTTGTGGACCAACGAAGAGCAGAGTCGCT TGGAGCAGCTGCTCATCCAGTATCCGCCAGAGGAAGTGGAAATGCGCAGA TTCGGGAAGATAGCGAAGGCCTTGGGCAACAGAACGGCACAGCAAGTGTA TAGTCGTGTCCAGAAGTATTTCCAAAAGCTGCACGATGCCGGAATGCCTG TGCCCGGTCGCATACCCAAGCATCGACGTCCTGGTTTGAGTAAGCCGAAG ATCAAACTTCGCAAGTCAACCTTCTTCCCCGCTCATAATATATCGCTACA AATGCCAGAGGACGATTTCACATTTGACGACCTGCGAATCCCATCGCCTG CGAGCGATATGCTCCTTATGCCGGCATCCAAGATCGAACCAAAGATCGAA TCCGAGTACATGGATGCCGATCTGAATGCGGAGTCAAAGCGAAAACAGGA ACTATGCCTTAAGCTTCTATCAGCCATTCAGGACGAGAAACGGGAAATGG AGGACGGATATGAGCCAGACTTGCTGGCCGCCAAGTGTGCCGAGTGCGAA GAGGCATCTGTGACCAGGACCCAATGGCGTTGTAACAGTTGTTATTGTTA CCTTAATCTGTGCGGAGATTGCCTGGCCAGTCAGCTAATCGAAGGGCGTT TCGAGCATTTAAGTCATGAAGTTGTAGTGGACCAAGAGTCATGACGCTCC TAGAGTCCCATTTACTTGAGTACTAAATTACTAGACTTGCCTGTAAAGCT ACAAATTAAATATAAAGAGAATAATTTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Atac1-RA | 1187 | Atac1-RA | 10..1187 | 1..1178 | 5890 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6958183..6959360 | 1178..1 | 5890 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6959093..6960276 | 1184..1 | 5920 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6959093..6960276 | 1184..1 | 5920 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6958213..6959360 | 1..1148 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac1-RA | 1..1071 | 24..1094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac1-RA | 1..1071 | 24..1094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac1-RA | 1..1071 | 24..1094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac1-RA | 1..1071 | 24..1094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac1-RA | 1..1071 | 24..1094 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac1-RA | 1..1178 | 1..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac1-RA | 10..1187 | 1..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac1-RA | 53..1230 | 1..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac1-RA | 1..1178 | 1..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac1-RA | 53..1230 | 1..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6959099..6960276 | 1..1178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6959099..6960276 | 1..1178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6959099..6960276 | 1..1178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6959099..6960276 | 1..1178 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6959099..6960276 | 1..1178 | 100 | Minus |
Translation from 23 to 1093
> LD21610.pep MEIAEISAEDEDVFHFETEHLALRGNQCYTNLLRTLAVLQAQRIRVHQQI EELEATQNIYLENPQHMLDKLRNNEPLIADNYITTTVLPDLPTLSPNDEE GGTNETPTDASSWTQEANKNRDRSNGRSENFNRLWTNEEQSRLEQLLIQY PPEEVEMRRFGKIAKALGNRTAQQVYSRVQKYFQKLHDAGMPVPGRIPKH RRPGLSKPKIKLRKSTFFPAHNISLQMPEDDFTFDDLRIPSPASDMLLMP ASKIEPKIESEYMDADLNAESKRKQELCLKLLSAIQDEKREMEDGYEPDL LAAKCAECEEASVTRTQWRCNSCYCYLNLCGDCLASQLIEGRFEHLSHEV VVDQES*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14463-PA | 369 | GF14463-PA | 1..369 | 1..356 | 1317 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23563-PA | 359 | GG23563-PA | 1..359 | 1..356 | 1784 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13580-PA | 344 | GH13580-PA | 10..344 | 7..356 | 1135 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Atac1-PA | 356 | CG9200-PA | 1..356 | 1..356 | 1871 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24194-PA | 368 | GI24194-PA | 36..367 | 13..355 | 1093 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25596-PA | 360 | GL25596-PA | 8..360 | 7..356 | 1262 | 66.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21607-PA | 360 | GA21607-PA | 8..360 | 7..356 | 1236 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13698-PA | 359 | GM13698-PA | 1..359 | 1..356 | 1823 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21463-PA | 361 | GJ21463-PA | 18..361 | 2..356 | 1174 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18102-PA | 347 | GK18102-PA | 5..347 | 9..356 | 1216 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18387-PA | 359 | GE18387-PA | 1..359 | 1..356 | 1770 | 90.8 | Plus |
Translation from 23 to 1093
> LD21610.hyp MEIAEISAEDEDVFHFETEHLALRGNQCYTNLLRTLAVLQAQRIRVHQQI EELEATQNIYLENPQHMLDKLRNNEPLIADNYITTTVLPDLPTLSPNDEE GGTNETPTDASSWTQEANKNRDRSNGRSENFNRLWTNEEQSRLEQLLIQY PPEEVEMRRFGKIAKALGNRTAQQVYSRVQKYFQKLHDAGMPVPGRIPKH RRPGLSKPKIKLRKSTFFPAHNISLQMPEDDFTFDDLRIPSPASDMLLMP ASKIEPKIESEYMDADLNAESKRKQELCLKLLSAIQDEKREMEDGYEPDL LAAKCAECEEASVTRTQWRCNSCYCYLNLCGDCLASQLIEGRFEHLSHEV VVDQES*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Atac1-PA | 356 | CG9200-PA | 1..356 | 1..356 | 1871 | 100 | Plus |