BDGP Sequence Production Resources |
Search the DGRC for LD21614
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 216 |
Well: | 14 |
Vector: | pOT2 |
Associated Gene/Transcript | Cdc5-RA |
Protein status: | LD21614.pep: gold |
Preliminary Size: | 2923 |
Sequenced Size: | 3185 |
Gene | Date | Evidence |
---|---|---|
CG6905 | 2001-01-01 | Release 2 assignment |
CG6905 | 2001-10-10 | Blastp of sequenced clone |
CG6905 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6905 | 2008-04-29 | Release 5.5 accounting |
CG6905 | 2008-08-15 | Release 5.9 accounting |
CG6905 | 2008-12-18 | 5.12 accounting |
3185 bp (3185 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061302
> LD21614.complete CGGAGTTTCGTGGACTCGAGTGAAAATTGTGAAAATCCATTGTATACGCG ACAGAAAGCAACATAAGGCCCCAGAATGCCGCGAATAATGATCAAGGGCG GCGTGTGGCGCAACACGGAGGATGAAATCCTCAAAGCTGCGGTTATGAAA TATGGCAAGAACCAGTGGAGTCGAATTGCCTCCCTCCTGCACAGAAAGTC CGCCAAGCAGTGCAAGGCCAGGTGGTACGAGTGGCTGGATCCCAGCATCA AGAAGACCGAGTGGTCCCGTGAGGAGGACGAGAAACTGCTCCACTTGGCC AAGCTGATGCCGACGCAGTGGCGCACCATAGCCCCGATCATCGGACGGAC GGCAGCCCAGTGCCTGGAGCGCTATGAGTACTTGCTAGACCAAGCCCAAC GCAAAGAGGATGGCGAGGACACGATGGATGATCCTCGCAAGTTGAAGCCC GGAGAGATTGACCCCAATCCAGAGACCAAGCCGGCGCGGCCCGATCCCAA GGACATGGACGAGGACGAGCTGGAAATGCTGTCCGAGGCACGCGCCCGCT TGGCCAACACGCAAGGCAAGAAAGCCAAGCGCAAGGCTCGCGAAAAGCAA CTGGAGGAAGCCCGCCGCCTGGCCACTCTCCAAAAGCGGCGCGAACTTCG TGCCGCCGGAATTGGCAGCGGAAATCGCAAGCGGATCAAGGGAATAGACT ACAACGCCGAGATTCCCTTCGAAAAGCGACCTGCCCACGGATTCTACGAC ACTTCCGAGGAACACTTGCAGAAAAATGAACCCGACTTCAACAAGATGCG GCAGCAGGACCTAGATGGAGAACTCCGCTCAGAGAAGGAGGAACGCGAAC GCAAGCGGGACAAGCAGAAGCTGAAGCAGCGCAAAGAGAATGAAGTGCCC ACCGCAATGCTGCAAAACATGGAGCCCGAGCGGAAGCGCTCCAAACTAGT CCTGCCTACGCCGCAGATTTCCGACATGGAACTACAGCAGGTAGTCAAGC TGGGACGCGCCAGTGAGATGGCAAAGGAAATTGCCGGTGAGAGCGGCATA GAGACGACGGATGCTTTGCTAGCCGACTACTCCATTACACCCCAGGTAGC AGCCACTCCACGTACTCCGGCTCCGTACACCGATCGCATCATGCAGGAGG CCCAAAACATGATGGCCCTCACCCACACAGAGACGCCACTCAAAGGTGGC CTGAACACACCGCTGCACGAGTCAGACTTCTCCGGCGTGCTGCCCAAGGC GGCCTCCATCGCCACGCCTAACACAGTGATTGCCACGCCGTTTAGAACCC AACGCGAGGGCGGAGCAGCCACTCCCGGCGGATTCCAAACGCCCTCCTCC GGAGCCCTAGTTCCCGTAAAGGGGGCAGGAGGGGCTACGGGTGTCGTCAA TACACCTGCCTACGTGAGGGACAAGCTAAGCATCAATCCTGAGGAGAGTA TGGGCGTCACCGAGACCCCAGCACATTACAAAAACTACCAAAAGCAACTA AAGTCTACACTGCGTGACGGTCTCTCCACGCTGCCCGCTCCACGGAATGA CTATGAGATCGTGGTGCCTGAGCAGGAGGAAAGCGAACGCATTGAGACCA ACTCAGAACCCGCCGTCGAGGATCAGGCGGATGTCGACGCCAGGTTATTG GCTGAACAAGAGGCGCGCCGAAAGCGAGAGCTAGAGAAGCGCTCCCAGGT TATTCAGCGTAGTCTCCCGCGACCAACTGAAGTGAACACCAAGATTCTGC GACCGCAGTCCGAGAAACAGAACCTTACGGAACAGCAGCAGGCCGAAGAG CTGATTAAACACGAAATGATCACCATGCAGCTGTACGACTCGGTCAAGGA TCCCGTGCCTGGTCAATCGCAGCACAAGTTGGAACAGCTACAAAGCTACT TTAAGGCCAATCCCTACGAGGACATCTCGCAGCAAGAGTTGGCGAAGGCC AAGCAAATGCTCACCGAGGAAATGGAGGTGGTGAAGGAGCGCATGGCGCA TGGCGAACTGCCCCTAGACGTTTATGCCCAGGTGTGGCAGGAGTGCCTCG GCCAGGTTCTTTACCTACCCTCCCAACATCGCTACACACGCGCCAATTTG GCCAGCAAGAAGGATCGATTAGAGTCTGCCGAGAAACGGCTGGAGACAAA TCGCCGCCACATGGCCAAGGAAGCCAAGCGCTGCGGCAAGATCGAGAAGA AGCTGAAGATTCTCACCGGCGGCTACCAGGCGCGCGCCCAGGTGCTGATT AAGCAGCTTCAGGACACGTACGGCCAGATTGAGCAGAACTCTGTCTCACT CTCGACATTCCGCTTTTTGGGCGAACAGGAGGCCATCGCTGTGCCGCGAC GCCTGGAATCGCTGCAAGAGGACGTGCGTCGCCAGATGGACCGCGAGAAG GAGCTGCAGCAAAAGTACGCTAGCTTAGTGGAGGAGCGCGATTCGCTTTA CTCTCAAATCGAACATATAACTGGCGTCAGGCCCACGGCCCAGCAACTCC TGCCCGACCAGGAAGCGTAAACCTTCTTTTGGAACCCAAGTCCGTTCTTA TTTAATTACAGTAATTACATGCCAGCAAACAGCTATCACCACCTAATATC CCGATCCATATTCCTCGCTAGCGGCCGTACTTCTGGTAGACCCACTCCTT GTTGTCCAGCGGACAGACCAGGCGCGTTTTCAACCAGCGCGCGATGCAGT GGTAATGGAATGCGTGGTTGCACTCGCCCCAAGCCACAGTGCACTCGTCT TGGTTTGCATTCGGGTCCGCCTGGCACTCGATGCACAGGTTCATGATGTG GTTACGGCAGATGGCACAGTTGTCCACTGCTACGTCCCATCCCCACATGG CGTGCGCAACCCATTTCTTCACCACAAAGCGCTCCGTCCTGGCCTGGACA GCTCCTCCACTACAGGATGGCTCTTCGTCATTGAAGTCCATGTCGTGGAA GTCCTCCGTCTCCTCAACCTCTATCTCCTCGGCCATGGTGTGAAATTACG AATTTTTTTTCTTTTTCAAAATACAACACTTATTTTCGTATTCGAATTTG ATTTGAACTATTTTAAATTCCATTTGTTTTTGGCCTGACAGTTAATAAAA AAAAGTTGACCACTACCGATTTATCTACGAAATAACAACGGCGAATAATT TTAAAAATAAATGCAGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6905-RA | 3392 | CG6905-RA | 195..3368 | 1..3174 | 15855 | 99.9 | Plus |
CG6905-RB | 3392 | CG6905-RB | 195..3368 | 1..3174 | 15855 | 99.9 | Plus |
CG6905.a | 3331 | CG6905.a | 195..2754 | 1..2560 | 12800 | 100 | Plus |
CG6905.a | 3331 | CG6905.a | 2755..3307 | 2622..3174 | 2750 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 359198..360642 | 1831..387 | 7225 | 100 | Minus |
chr3L | 24539361 | chr3L | 357804..359138 | 3166..1832 | 6675 | 100 | Minus |
chr3L | 24539361 | chr3L | 360702..360969 | 386..119 | 1340 | 100 | Minus |
chr3L | 24539361 | chr3L | 361036..361156 | 121..1 | 605 | 100 | Minus |
chrX | 22417052 | chrX | 541697..541908 | 2827..2619 | 410 | 80.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 359245..360689 | 1831..387 | 7225 | 100 | Minus |
3L | 28110227 | 3L | 357843..359185 | 3174..1832 | 6700 | 99.9 | Minus |
3L | 28110227 | 3L | 360749..361016 | 386..119 | 1340 | 100 | Minus |
3L | 28110227 | 3L | 361083..361203 | 121..1 | 605 | 100 | Minus |
X | 23542271 | X | 647711..647922 | 2827..2619 | 410 | 80.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 359245..360689 | 1831..387 | 7225 | 100 | Minus |
3L | 28103327 | 3L | 357843..359185 | 3174..1832 | 6700 | 99.9 | Minus |
3L | 28103327 | 3L | 360749..361016 | 386..119 | 1340 | 100 | Minus |
3L | 28103327 | 3L | 361083..361203 | 121..1 | 605 | 100 | Minus |
X | 23527363 | X | 655893..656020 | 2746..2619 | 310 | 82.8 | Minus |
X | 23527363 | X | 655809..655872 | 2827..2764 | 230 | 90.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tc3 | 1743 | Tc3 TC3 1743bp | 420..534 | 3109..2999 | 124 | 59.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 357804..359138 | 1832..3166 | 100 | <- | Minus |
chr3L | 359198..360642 | 387..1831 | 100 | <- | Minus |
chr3L | 360702..360967 | 121..386 | 100 | <- | Minus |
chr3L | 361037..361156 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6905-RA | 1..2445 | 76..2520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6905-RB | 1..2445 | 76..2520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cdc5-RA | 1..2445 | 76..2520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6905-RA | 1..2445 | 76..2520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cdc5-RA | 1..2445 | 76..2520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6905-RA | 181..3346 | 1..3166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6905-RB | 53..3218 | 1..3166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cdc5-RA | 181..3346 | 1..3166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6905-RA | 181..3346 | 1..3166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cdc5-RA | 181..3346 | 1..3166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 357851..359185 | 1832..3166 | 100 | <- | Minus |
3L | 359245..360689 | 387..1831 | 100 | <- | Minus |
3L | 360749..361014 | 121..386 | 100 | <- | Minus |
3L | 361084..361203 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 357851..359185 | 1832..3166 | 100 | <- | Minus |
3L | 359245..360689 | 387..1831 | 100 | <- | Minus |
3L | 360749..361014 | 121..386 | 100 | <- | Minus |
3L | 361084..361203 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 357851..359185 | 1832..3166 | 100 | <- | Minus |
3L | 359245..360689 | 387..1831 | 100 | <- | Minus |
3L | 360749..361014 | 121..386 | 100 | <- | Minus |
3L | 361084..361203 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 357851..359185 | 1832..3166 | 100 | <- | Minus |
arm_3L | 359245..360689 | 387..1831 | 100 | <- | Minus |
arm_3L | 360749..361014 | 121..386 | 100 | <- | Minus |
arm_3L | 361084..361203 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 357851..359185 | 1832..3166 | 100 | <- | Minus |
3L | 359245..360689 | 387..1831 | 100 | <- | Minus |
3L | 360749..361014 | 121..386 | 100 | <- | Minus |
3L | 361084..361203 | 1..120 | 100 | Minus |
Translation from 75 to 2519
> LD21614.pep MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARW YEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERY EYLLDQAQRKEDGEDTMDDPRKLKPGEIDPNPETKPARPDPKDMDEDELE MLSEARARLANTQGKKAKRKAREKQLEEARRLATLQKRRELRAAGIGSGN RKRIKGIDYNAEIPFEKRPAHGFYDTSEEHLQKNEPDFNKMRQQDLDGEL RSEKEERERKRDKQKLKQRKENEVPTAMLQNMEPERKRSKLVLPTPQISD MELQQVVKLGRASEMAKEIAGESGIETTDALLADYSITPQVAATPRTPAP YTDRIMQEAQNMMALTHTETPLKGGLNTPLHESDFSGVLPKAASIATPNT VIATPFRTQREGGAATPGGFQTPSSGALVPVKGAGGATGVVNTPAYVRDK LSINPEESMGVTETPAHYKNYQKQLKSTLRDGLSTLPAPRNDYEIVVPEQ EESERIETNSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRP TEVNTKILRPQSEKQNLTEQQQAEELIKHEMITMQLYDSVKDPVPGQSQH KLEQLQSYFKANPYEDISQQELAKAKQMLTEEMEVVKERMAHGELPLDVY AQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEA KRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGE QEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERDSLYSQIEHITG VRPTAQQLLPDQEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24891-PA | 812 | GF24891-PA | 1..804 | 1..804 | 3904 | 92.7 | Plus |
Dana\GF19984-PA | 646 | GF19984-PA | 149..236 | 5..92 | 158 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14664-PA | 814 | GG14664-PA | 1..814 | 1..814 | 4280 | 98.9 | Plus |
Dere\GG19364-PA | 660 | GG19364-PA | 134..221 | 5..92 | 161 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23816-PA | 828 | GH23816-PA | 1..811 | 1..809 | 3754 | 90.1 | Plus |
Dgri\GH22605-PA | 331 | GH22605-PA | 1..314 | 496..809 | 1398 | 85 | Plus |
Dgri\GH11855-PA | 672 | GH11855-PA | 160..244 | 9..92 | 167 | 37.6 | Plus |
Dgri\GH11855-PA | 672 | GH11855-PA | 108..211 | 8..110 | 157 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cdc5-PB | 814 | CG6905-PB | 1..814 | 1..814 | 4166 | 100 | Plus |
Cdc5-PA | 814 | CG6905-PA | 1..814 | 1..814 | 4166 | 100 | Plus |
Myb-PE | 657 | CG9045-PE | 137..221 | 9..92 | 164 | 37.6 | Plus |
Myb-PD | 657 | CG9045-PD | 137..221 | 9..92 | 164 | 37.6 | Plus |
Myb-PB | 657 | CG9045-PB | 137..221 | 9..92 | 164 | 37.6 | Plus |
Myb-PA | 657 | CG9045-PA | 137..221 | 9..92 | 164 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16655-PA | 817 | GI16655-PA | 1..809 | 1..809 | 3946 | 92.3 | Plus |
Dmoj\GI14170-PA | 1286 | GI14170-PA | 161..248 | 5..92 | 163 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22510-PA | 394 | GL22510-PA | 1..391 | 1..391 | 2038 | 97.7 | Plus |
Dper\GL22511-PA | 315 | GL22511-PA | 1..309 | 506..813 | 1471 | 90.6 | Plus |
Dper\GL24710-PA | 670 | GL24710-PA | 153..240 | 5..92 | 163 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19946-PA | 818 | GA19946-PA | 1..812 | 1..813 | 3967 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14280-PA | 814 | GM14280-PA | 1..814 | 1..814 | 4282 | 99.1 | Plus |
Dsec\GM22518-PA | 656 | GM22518-PA | 134..221 | 5..92 | 160 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25709-PA | 814 | GD25709-PA | 1..814 | 1..814 | 4280 | 99.4 | Plus |
Dsim\GD24674-PA | 657 | GD24674-PA | 134..221 | 5..92 | 156 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12907-PA | 820 | GJ12907-PA | 1..810 | 1..809 | 3943 | 92.7 | Plus |
Dvir\GJ18431-PA | 696 | GJ18431-PA | 172..259 | 5..92 | 165 | 39.3 | Plus |
Dvir\GJ18431-PA | 696 | GJ18431-PA | 123..226 | 8..110 | 158 | 35.2 | Plus |
Translation from 75 to 2519
> LD21614.hyp MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARW YEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERY EYLLDQAQRKEDGEDTMDDPRKLKPGEIDPNPETKPARPDPKDMDEDELE MLSEARARLANTQGKKAKRKAREKQLEEARRLATLQKRRELRAAGIGSGN RKRIKGIDYNAEIPFEKRPAHGFYDTSEEHLQKNEPDFNKMRQQDLDGEL RSEKEERERKRDKQKLKQRKENEVPTAMLQNMEPERKRSKLVLPTPQISD MELQQVVKLGRASEMAKEIAGESGIETTDALLADYSITPQVAATPRTPAP YTDRIMQEAQNMMALTHTETPLKGGLNTPLHESDFSGVLPKAASIATPNT VIATPFRTQREGGAATPGGFQTPSSGALVPVKGAGGATGVVNTPAYVRDK LSINPEESMGVTETPAHYKNYQKQLKSTLRDGLSTLPAPRNDYEIVVPEQ EESERIETNSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRP TEVNTKILRPQSEKQNLTEQQQAEELIKHEMITMQLYDSVKDPVPGQSQH KLEQLQSYFKANPYEDISQQELAKAKQMLTEEMEVVKERMAHGELPLDVY AQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEA KRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGE QEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERDSLYSQIEHITG VRPTAQQLLPDQEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cdc5-PB | 814 | CG6905-PB | 1..814 | 1..814 | 4166 | 100 | Plus |
Cdc5-PA | 814 | CG6905-PA | 1..814 | 1..814 | 4166 | 100 | Plus |
Myb-PE | 657 | CG9045-PE | 137..221 | 9..92 | 164 | 37.6 | Plus |
Myb-PD | 657 | CG9045-PD | 137..221 | 9..92 | 164 | 37.6 | Plus |
Myb-PB | 657 | CG9045-PB | 137..221 | 9..92 | 164 | 37.6 | Plus |