BDGP Sequence Production Resources |
Search the DGRC for LD21615
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 216 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2875-RA |
Protein status: | LD21615.pep: gold |
Preliminary Size: | 1759 |
Sequenced Size: | 1681 |
Gene | Date | Evidence |
---|---|---|
CG2875 | 2001-01-01 | Release 2 assignment |
CG2875 | 2001-10-10 | Blastp of sequenced clone |
CG2875 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2875 | 2008-04-29 | Release 5.5 accounting |
CG2875 | 2008-08-15 | Release 5.9 accounting |
CG2875 | 2008-12-18 | 5.12 accounting |
1681 bp (1681 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061303
> LD21615.complete ATTCATCTTATTTTTGTTTGTTGCGCATAATTAATATGTTTTAGCGTACA TTTGCCAAACCGAAAATGAAACCCTTAACTGTGAAAGTGAACGATGACAC CGGCAAGTCTTTGGCTAAGAAGAAGCTGCAGTCCAAGGCCAATTCCCTGC TAAATGCCGAGCAAGTGGACATCAAAACGCTCAAGGGATTCGTACAATTG CTGAAGAATACGCCCGATAATATGCCAGCTGGCGAGGTGATGAATACACT CGAGGTGATATTCAAGAATCTGCTAAAACGAAAGGCAATCGACGGCACCG AAAAGCAGGGTCTCAAAATCAAAAAACTGTACGAGGAAACTTGGTTGCTT CTCATCGAGAATCTACTGGTTGACTCGCAGTGTTCGGTTGCTGTAAAAGT GTGCATGCAGCTCATCAAAGTGGAGGCCAAGCATCCCATAGCACCCAACA AGGGTTGGCCCACCTACTGGATTCGCGGCATGCTGGAAACCCTAATAAAT AGCGATACAACGCCCACAACAGCGCTGGCAAACTATGGGAAATATTGCAA AAATCTCGATGTATTAGAGATAACCCTGACGCAATTGAAATCCTTAGTGC CCGATGAAGACTTCAAGGACAGCCCCATTAAGGCCATGAACTTTCTATCC ATTGTAAACCTCTTGGATATGGGAAAGTCTGTGCTGAGCACGGCAGATTA CCACGTGGAAAGCGCCAAAAAGCAGACTTTTAACTACGAGTTAAATCGCA AAAGACTGAATAATCTCTGGGCGACTATTATGGCAAAGGGCAACGAAGTG GACGAGAAACTGCATCGTCAAATACTTGTGGTGCTTCTGGAGCGCGTAAT CAACCACCTGAACGATCCCATCCAGCTGACCGACTTTCTCATGGACTCCC TCCATCAGTTTGATGGCCCCATTGCCTTGCTGGCTCTTCAGGGAATCTTT ACGCTTATGCAAAAGCAGAATATCACCTATCCGGATGTGTATGAGAAGCT GTACAATATGTTCTATCCACGGATGTTCCACAACAAGTACAAGGCACGCC TGTTTTACTTGGCCGATATCTTTCTGACCTCCACCCATTTGCCCGAGAAT CTGGTGGCGGCATTCGTTAAGCGTCTCGCTCGCCTGGCCCTTCAATCGCC GACCGAAGATGCTGTTATTATGATTCGATTCGTTTGCAATCTGCTATTGA GACATACTGGATTGCAGAAATTGATTCGCGCCAGCCATGCAGTCGATGAG GTCAGCGATCCTTACAATCAAACAGAAACGGATCCCGTCAAATCGGAGGC CATAAACAGTTCGCTGTGGGAAATTACGTTGCTGCAGAAACACGTTGTAC CAGAGGTGGCCAATGCGGCACGGTTTATTAACTCATCGCTGCCCGTAATG GAATTCGACTTAGCACCCCTCTTGGACAGAAAGGAATGCAATATTTTCGA CGACGAATTACAGTCGAAGGCCAAACAATTTGCTCTGAACTACGAACGTC CTACCAATTTGGCTTTGCCTAAAAACCAATTCGTGACCAAATACTGGGAC CTCATCTAGATTAGTGTTACTATTGCTAAGTTTAAGCAGGATTAAAGTGC TGCCTGTTATTGGGCTGCTGATGTGCCAATTCGGCCTGAAACCAATCGGC TGCTGAAATGTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 3466025..3466734 | 912..203 | 3535 | 99.9 | Minus |
chrX | 22417052 | chrX | 3465432..3465962 | 1442..912 | 2655 | 100 | Minus |
chrX | 22417052 | chrX | 3465149..3465367 | 1661..1443 | 1095 | 100 | Minus |
chrX | 22417052 | chrX | 3466798..3467000 | 203..1 | 1015 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 3572595..3573304 | 912..203 | 3550 | 100 | Minus |
X | 23542271 | X | 3572003..3572533 | 1442..912 | 2655 | 100 | Minus |
X | 23542271 | X | 3571720..3571939 | 1662..1443 | 1100 | 100 | Minus |
X | 23542271 | X | 3573368..3573570 | 203..1 | 1015 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 3580693..3581402 | 912..203 | 3550 | 100 | Minus |
X | 23527363 | X | 3580101..3580631 | 1442..912 | 2655 | 100 | Minus |
X | 23527363 | X | 3579818..3580037 | 1662..1443 | 1100 | 100 | Minus |
X | 23527363 | X | 3581466..3581668 | 203..1 | 1015 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 3466798..3467000 | 1..203 | 100 | Minus | |
chrX | 3465149..3465367 | 1443..1661 | 100 | <- | Minus |
chrX | 3465432..3465961 | 913..1442 | 100 | <- | Minus |
chrX | 3466025..3466733 | 204..912 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RA | 1..1494 | 66..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RA | 1..1494 | 66..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RA | 1..1494 | 66..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RA | 1..1494 | 66..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RA | 1..1494 | 66..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RA | 51..1711 | 1..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RA | 51..1711 | 1..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RA | 53..1713 | 1..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RA | 51..1711 | 1..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RA | 53..1713 | 1..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3571721..3571939 | 1443..1661 | 100 | <- | Minus |
X | 3572003..3572532 | 913..1442 | 100 | <- | Minus |
X | 3572595..3573303 | 204..912 | 100 | <- | Minus |
X | 3573368..3573570 | 1..203 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3571721..3571939 | 1443..1661 | 100 | <- | Minus |
X | 3572003..3572532 | 913..1442 | 100 | <- | Minus |
X | 3572595..3573303 | 204..912 | 100 | <- | Minus |
X | 3573368..3573570 | 1..203 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3571721..3571939 | 1443..1661 | 100 | <- | Minus |
X | 3572003..3572532 | 913..1442 | 100 | <- | Minus |
X | 3572595..3573303 | 204..912 | 100 | <- | Minus |
X | 3573368..3573570 | 1..203 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 3465754..3465972 | 1443..1661 | 100 | <- | Minus |
arm_X | 3466036..3466565 | 913..1442 | 100 | <- | Minus |
arm_X | 3466628..3467336 | 204..912 | 100 | <- | Minus |
arm_X | 3467401..3467603 | 1..203 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3579819..3580037 | 1443..1661 | 100 | <- | Minus |
X | 3580101..3580630 | 913..1442 | 100 | <- | Minus |
X | 3580693..3581401 | 204..912 | 100 | <- | Minus |
X | 3581466..3581668 | 1..203 | 100 | Minus |
Translation from 65 to 1558
> LD21615.pep MKPLTVKVNDDTGKSLAKKKLQSKANSLLNAEQVDIKTLKGFVQLLKNTP DNMPAGEVMNTLEVIFKNLLKRKAIDGTEKQGLKIKKLYEETWLLLIENL LVDSQCSVAVKVCMQLIKVEAKHPIAPNKGWPTYWIRGMLETLINSDTTP TTALANYGKYCKNLDVLEITLTQLKSLVPDEDFKDSPIKAMNFLSIVNLL DMGKSVLSTADYHVESAKKQTFNYELNRKRLNNLWATIMAKGNEVDEKLH RQILVVLLERVINHLNDPIQLTDFLMDSLHQFDGPIALLALQGIFTLMQK QNITYPDVYEKLYNMFYPRMFHNKYKARLFYLADIFLTSTHLPENLVAAF VKRLARLALQSPTEDAVIMIRFVCNLLLRHTGLQKLIRASHAVDEVSDPY NQTETDPVKSEAINSSLWEITLLQKHVVPEVANAARFINSSLPVMEFDLA PLLDRKECNIFDDELQSKAKQFALNYERPTNLALPKNQFVTKYWDLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22308-PA | 497 | GF22308-PA | 1..497 | 1..497 | 1978 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18574-PA | 497 | GG18574-PA | 1..497 | 1..497 | 2374 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12543-PA | 513 | GH12543-PA | 12..513 | 20..497 | 1392 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2875-PA | 497 | CG2875-PA | 1..497 | 1..497 | 2550 | 100 | Plus |
CG2875-PC | 496 | CG2875-PC | 1..496 | 1..497 | 2533 | 99.8 | Plus |
CG2875-PB | 496 | CG2875-PB | 1..496 | 1..497 | 2533 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14900-PA | 515 | GI14900-PA | 29..515 | 21..497 | 1519 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15786-PA | 476 | GL15786-PA | 9..476 | 13..497 | 1306 | 54 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15496-PA | 494 | GA15496-PA | 9..494 | 13..497 | 1414 | 56.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12718-PA | 497 | GM12718-PA | 1..497 | 1..497 | 2465 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11637-PA | 129 | GD11637-PA | 1..129 | 369..497 | 667 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15331-PA | 483 | GJ15331-PA | 27..483 | 20..497 | 1459 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25035-PA | 530 | GK25035-PA | 28..530 | 21..497 | 1414 | 57.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16887-PA | 497 | GE16887-PA | 1..497 | 1..497 | 2370 | 89.9 | Plus |
Translation from 65 to 1558
> LD21615.hyp MKPLTVKVNDDTGKSLAKKKLQSKANSLLNAEQVDIKTLKGFVQLLKNTP DNMPAGEVMNTLEVIFKNLLKRKAIDGTEKQGLKIKKLYEETWLLLIENL LVDSQCSVAVKVCMQLIKVEAKHPIAPNKGWPTYWIRGMLETLINSDTTP TTALANYGKYCKNLDVLEITLTQLKSLVPDEDFKDSPIKAMNFLSIVNLL DMGKSVLSTADYHVESAKKQTFNYELNRKRLNNLWATIMAKGNEVDEKLH RQILVVLLERVINHLNDPIQLTDFLMDSLHQFDGPIALLALQGIFTLMQK QNITYPDVYEKLYNMFYPRMFHNKYKARLFYLADIFLTSTHLPENLVAAF VKRLARLALQSPTEDAVIMIRFVCNLLLRHTGLQKLIRASHAVDEVSDPY NQTETDPVKSEAINSSLWEITLLQKHVVPEVANAARFINSSLPVMEFDLA PLLDRKECNIFDDELQSKAKQFALNYERPTNLALPKNQFVTKYWDLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2875-PA | 497 | CG2875-PA | 1..497 | 1..497 | 2550 | 100 | Plus |
CG2875-PC | 496 | CG2875-PC | 1..496 | 1..497 | 2533 | 99.8 | Plus |
CG2875-PB | 496 | CG2875-PB | 1..496 | 1..497 | 2533 | 99.8 | Plus |