BDGP Sequence Production Resources |
Search the DGRC for LD21667
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 216 |
Well: | 67 |
Vector: | pOT2 |
Associated Gene/Transcript | l(1)G0004-RA |
Protein status: | LD21667.pep: gold |
Preliminary Size: | 1094 |
Sequenced Size: | 944 |
Gene | Date | Evidence |
---|---|---|
CG11738 | 2001-01-01 | Release 2 assignment |
CG11738 | 2001-10-10 | Blastp of sequenced clone |
CG11738 | 2003-01-01 | Sim4 clustering to Release 3 |
l(1)G0004 | 2008-04-29 | Release 5.5 accounting |
l(1)G0004 | 2008-08-15 | Release 5.9 accounting |
l(1)G0004 | 2008-12-18 | 5.12 accounting |
944 bp (944 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061304
> LD21667.complete CAAAGCAGCTGGATTGAGAAATTATTGGAAACAACGCAGTAAAAGCACAA CAGATTGCACCATGGAGGCAGAGAACATCAGAGCAGACGCATTCGAGCCG GCGAAGAGAGCGACGAAGCGCGGAGCCAGCGGAGGCGGGCAGCAGGACGT GGAGATGCAGGTGGACGAGGCGACCGGCATTGAGGGCCAGGTGCTGGGAT CTTCGCGAGCATCGGCGCCGCCCAAGGCAAAGCGGGCCAGAAGCGAGCTG CGCAAGGTATCCGTGCCGCCACACAGGTACTCCTCGCTCAAGGAGCACTG GATGAAGATCTTTACGCCCGTGGTGGAGCACATGAAGCTGCAGATCCGCT TCAACATGAAGGCGCGCCAGGTGGAGCTGCGTGTGGGCCCCGAGACGCCG GACATAGCCAACCTGCAGCGCGGCGCCGACTTCGTGCGCGCCTTTCTCTG CGGCTTCGAGGTGGACGACGCCCTGGCCCTGCTGCGTCTGGAGGACCTGT TCGTCGAGTCGTTCGAAATCAAGGACGTGAAGACGCTGCGCGGCGACCAC CAGTCTCGCGCCATCGGCCGCCTCGCCGGCAAGGGCGGCCGCACCAAATT CACCATCGAGAACGTGACCAAGACCCGCATCGTGCTAGCCGATAGCAAGA TCCACATCCTGGGCAGCTACCAGAACATTCAGCTTGCGCGCCGGGCCGTC TGCAACCTAATCCTCGGCTCGCCGCCCAGCAAGGTGTATGGCAACCTGCG GGCAGTCGCCTCGCGCCTCTCGGAGCGCATGTGATTGGGAGAGCGGACTG GAGTGGACTGGACTGGAGTGGAGTTCGACTTGAGAGGGAGTAGTTGCGGT TTTTTTTTTAGCATTAGCAATAAATAATAAATATAATAACATGTATTCAA ACATTTACAATATACACAAACACACACAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20256950..20257868 | 1..920 | 4490 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 20391475..20392402 | 1..928 | 4640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 20376567..20377494 | 1..928 | 4640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 349..385 | 869..905 | 113 | 78.4 | Plus |
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 6935..6971 | 869..905 | 113 | 78.4 | Plus |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1043..1104 | 907..850 | 111 | 69.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20256950..20257874 | 1..927 | 94 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0004-RA | 1..723 | 62..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0004-RA | 1..723 | 62..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0004-RA | 1..723 | 62..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0004-RA | 1..723 | 62..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0004-RA | 1..723 | 62..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0004-RA | 25..951 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0004-RA | 25..951 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0004-RA | 29..955 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0004-RA | 25..951 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0004-RA | 29..955 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20391475..20392401 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20391475..20392401 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20391475..20392401 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20262502..20263428 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20376567..20377493 | 1..927 | 100 | Plus |
Translation from 0 to 783
> LD21667.hyp KAAGLRNYWKQRSKSTTDCTMEAENIRADAFEPAKRATKRGASGGGQQDV EMQVDEATGIEGQVLGSSRASAPPKAKRARSELRKVSVPPHRYSSLKEHW MKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDIANLQRGADFVRAFLC GFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGRLAGKGGRTKF TIENVTKTRIVLADSKIHILGSYQNIQLARRAVCNLILGSPPSKVYGNLR AVASRLSERM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0004-PA | 240 | CG11738-PA | 1..240 | 21..260 | 1208 | 100 | Plus |
Translation from 61 to 783
> LD21667.pep MEAENIRADAFEPAKRATKRGASGGGQQDVEMQVDEATGIEGQVLGSSRA SAPPKAKRARSELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMK ARQVELRVGPETPDIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVES FEIKDVKTLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSKIHIL GSYQNIQLARRAVCNLILGSPPSKVYGNLRAVASRLSERM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20246-PA | 239 | GF20246-PA | 1..239 | 1..240 | 1191 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19285-PA | 240 | GG19285-PA | 1..240 | 1..240 | 1262 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12628-PA | 240 | GH12628-PA | 1..240 | 1..240 | 1096 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0004-PA | 240 | CG11738-PA | 1..240 | 1..240 | 1208 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11042-PA | 237 | GI11042-PA | 1..237 | 1..240 | 1037 | 81.2 | Plus |
Dmoj\GI11041-PA | 214 | GI11041-PA | 4..213 | 2..218 | 451 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11169-PA | 238 | GA11169-PA | 1..238 | 1..240 | 1142 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23025-PA | 228 | GM23025-PA | 10..228 | 11..240 | 918 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17488-PA | 240 | GD17488-PA | 1..240 | 1..240 | 1241 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15820-PA | 239 | GJ15820-PA | 1..239 | 1..240 | 1103 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20148-PA | 240 | GK20148-PA | 1..240 | 1..240 | 1027 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17874-PA | 240 | GE17874-PA | 1..240 | 1..240 | 1254 | 98.3 | Plus |