BDGP Sequence Production Resources |
Search the DGRC for LD21675
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 216 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3679-RA |
Protein status: | LD21675.pep: gold |
Preliminary Size: | 2717 |
Sequenced Size: | 2738 |
Gene | Date | Evidence |
---|---|---|
CG3679 | 2000-02-14 | Blastp of sequenced clone |
CG3679 | 2001-01-01 | Release 2 assignment |
CG3679 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3679 | 2008-04-29 | Release 5.5 accounting |
CG3679 | 2008-08-15 | Release 5.9 accounting |
CG3679 | 2008-12-18 | 5.12 accounting |
2738 bp (2738 high quality bases) assembled on 2000-02-14
GenBank Submission: AF132178
> LD21675.complete CAAACACGGCGTTGTTTCGAAGTTTTTTTGTATTAGTTTCTATCCTGAAA TTGTTGATATTTGTGTTCATGCGAAGATGTGTGATGTCCGAAATCTAATT GACCTGACCGAATGGGATGAGCCCAGCAAGGAGGCGTTGCACGAAGAGCC GGAGGACTCTGTGGTGGCCACGAACTTTGAGGTGCCCTACGATCCCTTCG ATCTGATGGAGAAGGAAGCTTGCATCAAGGGCATGACCTTGACGTCGCAG ATCAAGGAAAAGGTGTCCAGTGCCGAACGACAGTATCCGGATCTTGAGAG CGAGAGTCCTCCGGTTTGCATGCAGACGGACACAGCGAATGCGTCCGCAC CAGGATCAGGTGAAACAACCCAAAAGAAGCGCTCGAACAGCTCATTCCAG AAGCAGCTCCTCAAACTTAATGCCTCGCGATCCGTGATCAACACCCCACC CCATAGTCGATCCAAAACAGAGTTTGAAAGAACAATACTGAACGAAAACC TGCAGATGCTAGCGGCAGAGTCACCACTGAAGCTTATTGAGGACGACGAC GTCCTGTCCACCAGTATCAATTTCGAGGAAGACCTCAAAATGCTACGCAT TCCGATCCTAGACGCGCTAAACAATGCAGAATCCAAGGCAATAGCCGAAG ACAATCACGGAAACGTAAACAAAATTGATGTCGTGATTCAGGAGGGTCAG AAAAGTCCACAGACAACAATCGAAAACCGATCAAATGGCAAGAGTTTGAG CCAGCTCCTGGAACAGCTGAAGATCTTGGCACACGAACACGTCGAGAGGT CGAAGTGGCATTTGTTTGACTCGGCAATTGAATCCATTGCCGCGGTCATC TTCGGACCCAGTGGCTCTTGTCCGGATGATAGGAAAGCCGAATCAACTAT ACCATCGCTATACTCATACACCCGCCAAGGAACATTCGATCTCGAACTTC AAGGCACAAAGACAAAGCGTTCCCTGGATGCTAACCACATACAGGAGGAG GAGATCGATGTACCAGGCAGTAACGTTCAAAGCTTTCCCGATGCCATGGT CTGTTCAACAGCCACGTTTGATGGCGAATCGCGACTAGATGCATTTGATA AGGACTTGCTTTCATCTCTACCATCAATACCATCAATACCATCGATACCT TCGATACCGCCCGTGTCAGTAGCCAAAAAGGAGCCATTTATGACGGAGTT GGTCGACGAAACACTCGCTCAACAGATTAACGAACTGCTGGAGCGGCACA AACTCGCAAACACGGGGATCAGTGATCATGAACAACAGCAGGGACTTGAT CCCAGGACAGTCATACTGTTGGTGAACCCCAGCAACTACAGCAGCACTCA GGTAGCATACACAACGAGCAACGTGGCCAAGACTAAGCCAATGCCTCTAC GTGAGACCAATGCGGCGGGCTCAATGCGCCGTCGATCGTCGTCGCTTTCC ATTCAGGACAAGTCTAAGCTGCCCCGGGAAGTCCTGAAGTCCGATCGCCA GGTGGAGAATCTTCCGCCGCCCAAGGAGACCAAGAACACAGCCACTGTTG GGCCGATGGGTGCAGCAGCTGCCTTTCGCCAGAGGAGCAACTCCTTCTCC ACGCCAAGTAATCCGTCCACAAAGGCCTACGAGAACAGGCGTACTCTAAT GAGCAGCCGCTTGAGGAATCCAGCCATAAACGAATCGGTGTCCAAACCCA GTGGAAGTGTTAAGGCGACGAAGCCCATCAAGCCGGTGGTTCCCATTATG AAAGTGACCGCAAGCAACGATTCCACCTACCTGAATCCGTTCCATCCGCG TGTACCCGAAACGCCCATCTCATCGAGGACCAAACCCGCCCAAAACATAT CCTGCACGAGCACACCACTGCCACAAATGCGCACCCAGCAGCGCAGATCC CTGAAGCCAATGGCCATGACCGCAGGATCGGGATCCCTGTCAAATACCTC CTATTCGACGCCCAGCATTAGGGGGCCGAGCTTCTGCAAGAAGAGCGGTT CCGGCTAGAGGATAGAGAGCGTGCATTGCGTAGGAATGGGGAATGGGGGA GCACTTCCTTGGCCCGTGGGCGGTGGCGCAATGTCGCCTGAAAGTGAATT CGAATGTGATGTCTGAGGTCAAGTTTTTAACCTTGCAGATAAACCGACAA TGTGAAAACGGCTTGGCTATCTCCCCCATATATTTTTGTTTGTTCCATTT GTTTTTCCTTTTTTTTTTTTTTGGCCGACGTCACAAGATAAAGCGAACTG ATATGCAGTCTGCACTCCATACTAAACGTTAGCAAATTAGTTTTCGTTTC GAAACGGATTAGCAGTGGAGCCAGTACTTTATATTTAATTTCCACTCGAA CTGAACGAACTAATTAGTTAATTTATCTTTGTTAACTACTCACTAACCCA CTAAGTTACCTTGCGAACTCATAGTGCTTGAAATCCCTTTCTCATTTCCC TATGTTTTTGAAATTCCACTGAAGTGGAGTTGATTAAAGAAGAGATTTAA TAGTAAGCCAAGCATATCAGAAGAGAATAAAAATAGCATTTAAGAGGCAG GTGAAGCCGTTTGACCACAAGTATCCTACGTTTTAAGGATTTGTCCATTG ATGTAATACCTAGAACTAGTAGCTTGCAAAGCACACTCCCTATTAATTTC GCTTTTCGCAGCTGTCTTGAAAGACCAGCGAGGAATAATTCAATAAAAAG AGATTATCAGTTAAGCAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16194859..16196626 | 948..2716 | 8555 | 99 | Plus |
chrX | 22417052 | chrX | 16193961..16194686 | 228..953 | 3555 | 99.3 | Plus |
chrX | 22417052 | chrX | 16193624..16193853 | 1..230 | 1135 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
invader2 | 5124 | invader2 INVADER2 5124bp | 3469..3508 | 69..30 | 119 | 77.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16193624..16193852 | 1..229 | 99 | -> | Plus |
chrX | 16193963..16194685 | 230..952 | 99 | -> | Plus |
chrX | 16194864..16196626 | 953..2716 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3679-RA | 1..1932 | 77..2008 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3679-RA | 1..1932 | 77..2008 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3679-RA | 1..1932 | 77..2008 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3679-RA | 1..1932 | 77..2008 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3679-RA | 1..1932 | 77..2008 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3679-RA | 1..2716 | 1..2716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3679-RA | 1..2716 | 1..2716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3679-RA | 45..2760 | 1..2716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3679-RA | 1..2716 | 1..2716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3679-RA | 45..2760 | 1..2716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16303914..16304142 | 1..229 | 100 | -> | Plus |
X | 16304253..16304975 | 230..952 | 100 | -> | Plus |
X | 16305159..16306922 | 953..2716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16303914..16304142 | 1..229 | 100 | -> | Plus |
X | 16304253..16304975 | 230..952 | 100 | -> | Plus |
X | 16305159..16306922 | 953..2716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16303914..16304142 | 1..229 | 100 | -> | Plus |
X | 16304253..16304975 | 230..952 | 100 | -> | Plus |
X | 16305159..16306922 | 953..2716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16197947..16198175 | 1..229 | 100 | -> | Plus |
arm_X | 16198286..16199008 | 230..952 | 100 | -> | Plus |
arm_X | 16199192..16200955 | 953..2716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16312012..16312240 | 1..229 | 100 | -> | Plus |
X | 16312351..16313073 | 230..952 | 100 | -> | Plus |
X | 16313257..16315020 | 953..2716 | 100 | Plus |
Translation from 0 to 2007
> LD21675.hyp KHGVVSKFFCISFYPEIVDICVHAKMCDVRNLIDLTEWDEPSKEALHEEP EDSVVATNFEVPYDPFDLMEKEACIKGMTLTSQIKEKVSSAERQYPDLES ESPPVCMQTDTANASAPGSGETTQKKRSNSSFQKQLLKLNASRSVINTPP HSRSKTEFERTILNENLQMLAAESPLKLIEDDDVLSTSINFEEDLKMLRI PILDALNNAESKAIAEDNHGNVNKIDVVIQEGQKSPQTTIENRSNGKSLS QLLEQLKILAHEHVERSKWHLFDSAIESIAAVIFGPSGSCPDDRKAESTI PSLYSYTRQGTFDLELQGTKTKRSLDANHIQEEEIDVPGSNVQSFPDAMV CSTATFDGESRLDAFDKDLLSSLPSIPSIPSIPSIPPVSVAKKEPFMTEL VDETLAQQINELLERHKLANTGISDHEQQQGLDPRTVILLVNPSNYSSTQ VAYTTSNVAKTKPMPLRETNAAGSMRRRSSSLSIQDKSKLPREVLKSDRQ VENLPPPKETKNTATVGPMGAAAAFRQRSNSFSTPSNPSTKAYENRRTLM SSRLRNPAINESVSKPSGSVKATKPIKPVVPIMKVTASNDSTYLNPFHPR VPETPISSRTKPAQNISCTSTPLPQMRTQQRRSLKPMAMTAGSGSLSNTS YSTPSIRGPSFCKKSGSG*
Translation from 76 to 2007
> LD21675.pep MCDVRNLIDLTEWDEPSKEALHEEPEDSVVATNFEVPYDPFDLMEKEACI KGMTLTSQIKEKVSSAERQYPDLESESPPVCMQTDTANASAPGSGETTQK KRSNSSFQKQLLKLNASRSVINTPPHSRSKTEFERTILNENLQMLAAESP LKLIEDDDVLSTSINFEEDLKMLRIPILDALNNAESKAIAEDNHGNVNKI DVVIQEGQKSPQTTIENRSNGKSLSQLLEQLKILAHEHVERSKWHLFDSA IESIAAVIFGPSGSCPDDRKAESTIPSLYSYTRQGTFDLELQGTKTKRSL DANHIQEEEIDVPGSNVQSFPDAMVCSTATFDGESRLDAFDKDLLSSLPS IPSIPSIPSIPPVSVAKKEPFMTELVDETLAQQINELLERHKLANTGISD HEQQQGLDPRTVILLVNPSNYSSTQVAYTTSNVAKTKPMPLRETNAAGSM RRRSSSLSIQDKSKLPREVLKSDRQVENLPPPKETKNTATVGPMGAAAAF RQRSNSFSTPSNPSTKAYENRRTLMSSRLRNPAINESVSKPSGSVKATKP IKPVVPIMKVTASNDSTYLNPFHPRVPETPISSRTKPAQNISCTSTPLPQ MRTQQRRSLKPMAMTAGSGSLSNTSYSTPSIRGPSFCKKSGSG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19621-PA | 583 | GF19621-PA | 1..581 | 1..611 | 1320 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17950-PA | 628 | GG17950-PA | 1..628 | 1..643 | 2748 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12468-PA | 653 | GH12468-PA | 1..641 | 1..613 | 641 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3679-PB | 643 | CG3679-PB | 1..643 | 1..643 | 3268 | 100 | Plus |
CG3679-PA | 643 | CG3679-PA | 1..643 | 1..643 | 3268 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11143-PA | 633 | GI11143-PA | 1..632 | 1..641 | 754 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21320-PA | 632 | GL21320-PA | 1..632 | 1..643 | 1311 | 49.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17607-PA | 632 | GA17607-PA | 1..632 | 1..643 | 1334 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13420-PA | 385 | GM13420-PA | 1..376 | 1..375 | 1800 | 91.5 | Plus |
Dsec\GM13421-PA | 205 | GM13421-PA | 1..205 | 439..643 | 1032 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17274-PA | 477 | GD17274-PA | 1..475 | 1..475 | 2269 | 95.4 | Plus |
Dsim\GD24831-PA | 86 | GD24831-PA | 1..86 | 558..643 | 438 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18521-PA | 649 | GJ18521-PA | 1..648 | 1..641 | 784 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10067-PA | 649 | GK10067-PA | 1..647 | 1..643 | 669 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11014-PA | 639 | GE11014-PA | 1..639 | 1..643 | 2893 | 86.5 | Plus |