BDGP Sequence Production Resources |
Search the DGRC for LD21681
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 216 |
Well: | 81 |
Vector: | pOT2 |
Associated Gene/Transcript | l(2)dtl-RA |
Protein status: | LD21681.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 2657 |
Gene | Date | Evidence |
---|---|---|
CG11295 | 2001-01-01 | Release 2 assignment |
CG11295 | 2002-06-10 | Blastp of sequenced clone |
CG11295 | 2003-01-01 | Sim4 clustering to Release 3 |
l(2)dtl | 2008-04-29 | Release 5.5 accounting |
l(2)dtl | 2008-08-15 | Release 5.9 accounting |
l(2)dtl | 2008-12-18 | 5.12 accounting |
2657 bp (2657 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121647
> LD21681.complete AGCACGGTCACACTGCCCAAGAGTCCAGCTGCGTCGTTGAAAAATATTTT CGATGCCTCGAAGGTTGATTTATTTCAGAGGAAATAGCAGGAAATAAAGT TGAAAACGCAGATTACGAGCAGCAGCCGCCAAGAGGAGTGCACAATGAAC ATTTACAACAAGTTGCGGGCCAGGGAGCATGGCTACGGCAATGAGAGGAC CTACGACTTCGCCCTGCGCCGCCTTTCCGTGGCCAAGGAGGACAGCTGGC GGGGCATCGCGCCGGCCAACTACTGCCCAGACTTCAATCCGGAACCGCCG ATCTTCTCCGCCAAGTTCGCCAACTGCGATGGCTATCGGCACATCCTGGC GATCGCCAACGAGGACGGCAAGATCACGCTGCAGGACACCACCCAGCGCA ACCACCAGCCGGAGGAGCAGTCCCTGGTGGGCCCGCAGTGCCACTTCAAC GCCGTTTTCGATCTGGAATGGGCACCCGGCCAGATGCGCTTCGTCTCCGC CTCGGGCGATCACACTGCCAGACTGTGGGAGGTGGCGGGCTCCGGCATAC GCGGCCTGAACTCCTATGTGGGTCACACAAGGTCCGTCAAGTCGGCGGCC TTTAAGCGCACCGATCCCGCTGTCTTCGCCACCGGCGGCCGTGATGGCGC CATTCTCATCTGGGACATCAGGGCCAATCTCAATATGGACCTCACGTCAC GCGTGGACAACTGCATCTACAGCGGTCACACGGGCGGACCGGGCACGCCA GTCTCACAGCGCAAGCAGCGCACACGCACTCCCAAGATGGCCGGAGGAAC CACCTCGAGCAGCATCACTGGCTTGGCCTTCCAGGACAACGATACGTTGA TCTCCTGTGGTGCCGGTGACGGAGTCATCAAGGTGTGGGACCTGCGGCGC AACTACACAGCCTACAAAAAGGAGCCACTGCCCAGGCACAAGCTGCCATA TGCCGGCAGCTCCACCTTCCGTGGATTCACCAACCTCATTGTGGACGCGT CAGGCACGAGGCTGTATGCCAACTGCATGGACAACACCATCTATTGCTAC AATCTGGCCTCCTACTCGCAGCGCCCGCTGGCGTGCTACAAGGGACTCCT TAACTCCACGTTCTACATCAAATCCTGCCTCAGCCCGGACGGCAAGTATC TGCTGAGCGGAAGCAGCGACGAGCGGGCTTACATCTGGAACCTGGACCAC GCCGAGGAGCCGCTCGTTGCACTGGCCGGACACACGGTGGAGGTAACCTG CGTGGCCTGGGGCTCCAGCCACGATTGCCCCATTGTCACGTGCAGCGATG ATGCGCGTCACAAAATCTGGCGGATTGGACCCGACCTGGATGGCCTCAGC GAGGCGGAGCGGGCGGAAAAGTACCGAGGAACTGCCTCCTACGTCAGGGA GTTCGGCAAGAAGGCATTTGGTCCGTCTAGTGGAAATCACAAGTACAATC TTCGAGATCTGGAGTCCACGCCAAGATCTCTGAAGCGCCTTATGGATCAA AATGAAAGGACGCCAGGTTCCGTGGAAAAGACGACGACCAAGCGTTCGTT CCTGGAAATGCTGGGCGTAGCTGGCCAGGAGACGGAAGCCACAGAACAGC CCCAGAAACGGGCGAAGCCACTGGAGTCACGTGGAAGGCGGCTCTTTGGA CCTTCTAGCCAGGAAACTGCTTGCAGGCACATACAACTTCAGTCCATAAA CGAGGAAGATGCCTCGCCGAGCAAGAGACAAAAGGAGAACTCTGCCGCGG AGGATGTCTCACCACTGCACAAGCTTCTCAGCACACCAAGTCATTCCCCT TTGAGTGAGAATGTCAACCATGTGTACACCTCCCCGCCAACCACGTCAGC GGCAGCAGCAGCGGTGGCTGCAGACGCGCTTAATCCGCCGCCGATCTCCG CTGCCATCTACTCGCCCACCTCCAACCTGCCCAATTACGTGCTGGATGGC GAGGCACCGCACCTGGGCATCATGTCGCCCAAGCGGAAGGCGAAGGAGAA GGTGGACTGGCTGACGAATATCCGCAAACAGAAGCTGATGAGTGGCAGGG CCCATGTGACGCTCAGCGAAAAGATCAGCGAGGAGCAGCAGGCCGATGTG CTGGCATCCCCGCGCCTCCAGAGTCTGCGGCAGTCAGAGTGCAGTCCCAG GATACACGCCTCGCCCCGCAGACGCATCTCCCATACGGACGGAGGCGGTG GCACGCCGGCTGGCAGCTCCTCGCACTCCCATTCCCAATCCCAGCCAAAA ACGCCCACTTCCAGTAGGCGAAACAGCGAGACGACGCTCCTGCGATTCTT TAGCATTCAGAGAAGTAGCAGTGTGCCGGCGGAGGAAACAACGACAACGA ATGCGGCTCCCTCCTCTTCTGATCCCCATCCCCCGGCAGTGACTGCGCCC GCAGCCACGCCCCTCAGCATGCGCACGCCCACGACGGCGGTGGGCAGCGA TTGACGCGGAGCCTCGAGCCACAGCACCATTATTGCACTTGTAGTTTTAA GCGGACATTGTTTAAGTTATTTTATGTAGATAGTAGGTTGCATCTATCGC GGGACGAGTTGGTAACCAACTCCCCGCCCTCTGTACAGAGCCAAAAGATA CGAAAGACTAACGTACCCGAATAAAAGTAACTCCATTTTAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(2)dtl-RA | 2673 | l(2)dtl-RA | 27..2668 | 1..2642 | 13210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19588651..19588837 | 1..187 | 99 | -> | Plus |
chr2R | 19589112..19591563 | 188..2639 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)dtl-RA | 1..2310 | 145..2454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)dtl-RA | 1..2310 | 145..2454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)dtl-RA | 1..2310 | 145..2454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)dtl-RA | 1..2310 | 145..2454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)dtl-RA | 1..2310 | 145..2454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)dtl-RA | 13..2651 | 1..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)dtl-RA | 13..2651 | 1..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)dtl-RA | 15..2653 | 1..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)dtl-RA | 13..2651 | 1..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)dtl-RA | 15..2653 | 1..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23702491..23702677 | 1..187 | 100 | -> | Plus |
2R | 23702952..23705403 | 188..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23702491..23702677 | 1..187 | 100 | -> | Plus |
2R | 23702952..23705403 | 188..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23702491..23702677 | 1..187 | 100 | -> | Plus |
2R | 23702952..23705403 | 188..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19590014..19590200 | 1..187 | 100 | -> | Plus |
arm_2R | 19590475..19592926 | 188..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23704169..23706620 | 188..2639 | 100 | Plus | |
2R | 23703708..23703894 | 1..187 | 100 | -> | Plus |
Translation from 144 to 2453
> LD21681.pep MNIYNKLRAREHGYGNERTYDFALRRLSVAKEDSWRGIAPANYCPDFNPE PPIFSAKFANCDGYRHILAIANEDGKITLQDTTQRNHQPEEQSLVGPQCH FNAVFDLEWAPGQMRFVSASGDHTARLWEVAGSGIRGLNSYVGHTRSVKS AAFKRTDPAVFATGGRDGAILIWDIRANLNMDLTSRVDNCIYSGHTGGPG TPVSQRKQRTRTPKMAGGTTSSSITGLAFQDNDTLISCGAGDGVIKVWDL RRNYTAYKKEPLPRHKLPYAGSSTFRGFTNLIVDASGTRLYANCMDNTIY CYNLASYSQRPLACYKGLLNSTFYIKSCLSPDGKYLLSGSSDERAYIWNL DHAEEPLVALAGHTVEVTCVAWGSSHDCPIVTCSDDARHKIWRIGPDLDG LSEAERAEKYRGTASYVREFGKKAFGPSSGNHKYNLRDLESTPRSLKRLM DQNERTPGSVEKTTTKRSFLEMLGVAGQETEATEQPQKRAKPLESRGRRL FGPSSQETACRHIQLQSINEEDASPSKRQKENSAAEDVSPLHKLLSTPSH SPLSENVNHVYTSPPTTSAAAAAVAADALNPPPISAAIYSPTSNLPNYVL DGEAPHLGIMSPKRKAKEKVDWLTNIRKQKLMSGRAHVTLSEKISEEQQA DVLASPRLQSLRQSECSPRIHASPRRRISHTDGGGGTPAGSSSHSHSQSQ PKTPTSSRRNSETTLLRFFSIQRSSSVPAEETTTTNAAPSSSDPHPPAVT APAATPLSMRTPTTAVGSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13076-PA | 774 | GF13076-PA | 1..774 | 1..769 | 3628 | 87.9 | Plus |
Dana\GF14067-PA | 419 | GF14067-PA | 161..388 | 115..372 | 154 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22879-PA | 765 | GG22879-PA | 1..765 | 1..769 | 3979 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21305-PA | 772 | GH21305-PA | 1..734 | 1..729 | 2830 | 75.1 | Plus |
Dgri\GH11537-PA | 347 | GH11537-PA | 87..322 | 90..370 | 162 | 24.1 | Plus |
Dgri\GH13339-PA | 419 | GH13339-PA | 161..388 | 115..372 | 159 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(2)dtl-PA | 769 | CG11295-PA | 1..769 | 1..769 | 4050 | 100 | Plus |
CG7611-PJ | 630 | CG7611-PJ | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PI | 630 | CG7611-PI | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PA | 630 | CG7611-PA | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PD | 630 | CG7611-PD | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PC | 630 | CG7611-PC | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PH | 630 | CG7611-PH | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PB | 630 | CG7611-PB | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PG | 630 | CG7611-PG | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PE | 630 | CG7611-PE | 525..623 | 315..415 | 163 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19740-PA | 777 | GI19740-PA | 1..777 | 1..769 | 2808 | 72.1 | Plus |
Dmoj\GI17814-PA | 419 | GI17814-PA | 161..388 | 115..372 | 167 | 28 | Plus |
Dmoj\GI17028-PA | 347 | GI17028-PA | 89..322 | 92..370 | 155 | 22.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16882-PA | 772 | GL16882-PA | 1..772 | 1..769 | 3331 | 83 | Plus |
Dper\GL15160-PA | 75 | GL15160-PA | 16..75 | 703..769 | 148 | 58.2 | Plus |
Dper\GL13202-PA | 75 | GL13202-PA | 16..75 | 703..769 | 148 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10897-PA | 772 | GA10897-PA | 1..772 | 1..769 | 3324 | 82.9 | Plus |
Dpse\GA22790-PA | 154 | GA22790-PA | 2..154 | 566..769 | 332 | 45.1 | Plus |
Dpse\GA22917-PA | 148 | GA22917-PA | 19..148 | 583..769 | 302 | 44.9 | Plus |
Dpse\GA22789-PA | 90 | GA22789-PA | 18..90 | 400..513 | 207 | 47.4 | Plus |
Dpse\GA20480-PA | 634 | GA20480-PA | 317..612 | 100..400 | 157 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16040-PA | 767 | GM16040-PA | 1..767 | 1..769 | 4052 | 98.2 | Plus |
Dsec\GM12236-PA | 446 | GM12236-PA | 159..446 | 100..393 | 166 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11788-PA | 769 | GD11788-PA | 1..769 | 1..769 | 4081 | 98.6 | Plus |
Dsim\GD17720-PA | 446 | GD17720-PA | 159..446 | 100..393 | 167 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17993-PA | 758 | GJ17993-PA | 1..758 | 1..769 | 2991 | 74.6 | Plus |
Dvir\GJ17641-PA | 419 | GJ17641-PA | 161..388 | 115..372 | 163 | 27.2 | Plus |
Dvir\GJ24581-PA | 347 | GJ24581-PA | 23..322 | 67..370 | 156 | 24.5 | Plus |
Dvir\GJ11835-PA | 641 | GJ11835-PA | 536..615 | 315..396 | 155 | 42.2 | Plus |
Translation from 144 to 2453
> LD21681.hyp MNIYNKLRAREHGYGNERTYDFALRRLSVAKEDSWRGIAPANYCPDFNPE PPIFSAKFANCDGYRHILAIANEDGKITLQDTTQRNHQPEEQSLVGPQCH FNAVFDLEWAPGQMRFVSASGDHTARLWEVAGSGIRGLNSYVGHTRSVKS AAFKRTDPAVFATGGRDGAILIWDIRANLNMDLTSRVDNCIYSGHTGGPG TPVSQRKQRTRTPKMAGGTTSSSITGLAFQDNDTLISCGAGDGVIKVWDL RRNYTAYKKEPLPRHKLPYAGSSTFRGFTNLIVDASGTRLYANCMDNTIY CYNLASYSQRPLACYKGLLNSTFYIKSCLSPDGKYLLSGSSDERAYIWNL DHAEEPLVALAGHTVEVTCVAWGSSHDCPIVTCSDDARHKIWRIGPDLDG LSEAERAEKYRGTASYVREFGKKAFGPSSGNHKYNLRDLESTPRSLKRLM DQNERTPGSVEKTTTKRSFLEMLGVAGQETEATEQPQKRAKPLESRGRRL FGPSSQETACRHIQLQSINEEDASPSKRQKENSAAEDVSPLHKLLSTPSH SPLSENVNHVYTSPPTTSAAAAAVAADALNPPPISAAIYSPTSNLPNYVL DGEAPHLGIMSPKRKAKEKVDWLTNIRKQKLMSGRAHVTLSEKISEEQQA DVLASPRLQSLRQSECSPRIHASPRRRISHTDGGGGTPAGSSSHSHSQSQ PKTPTSSRRNSETTLLRFFSIQRSSSVPAEETTTTNAAPSSSDPHPPAVT APAATPLSMRTPTTAVGSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(2)dtl-PA | 769 | CG11295-PA | 1..769 | 1..769 | 4050 | 100 | Plus |
CG7611-PJ | 630 | CG7611-PJ | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PI | 630 | CG7611-PI | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PA | 630 | CG7611-PA | 525..623 | 315..415 | 163 | 36.3 | Plus |
CG7611-PD | 630 | CG7611-PD | 525..623 | 315..415 | 163 | 36.3 | Plus |