BDGP Sequence Production Resources |
Search the DGRC for LD21694
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 216 |
Well: | 94 |
Vector: | pOT2 |
Associated Gene/Transcript | thoc5-RA |
Protein status: | LD21694.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2005 |
Gene | Date | Evidence |
---|---|---|
CG2980 | 2001-01-01 | Release 2 assignment |
CG2980 | 2002-06-10 | Blastp of sequenced clone |
CG2980 | 2003-01-01 | Sim4 clustering to Release 3 |
thoc5 | 2008-04-29 | Release 5.5 accounting |
thoc5 | 2008-08-15 | Release 5.9 accounting |
thoc5 | 2008-12-18 | 5.12 accounting |
2005 bp (2005 high quality bases) assembled on 2002-06-10
GenBank Submission: AY061305
> LD21694.complete CTGATTTACAATTTCGCCAAATAAAATGGAAACAATATTGAACACGCAGT TCGATCAGCTGCAAAAGGCCATAGAGGGAATTAAGGAGGCGAAGAGCAAG GGGCAATCGACGGATGAGGCTCGCATTGCCACCACCTTGATGTTCGTGGC TCTGAAGCACGCCAACCGCGAGGTGAAGCACAAGATCAAAGCGGGGCGCG ACAAGCTGCACCTGGAAAAGTGCAAGGTGGACCTCAGCCGGCTGCAGCTG CAGAATCTTCTGTACGAAGTGAGCCACCTGAAGAAGGAGATTGTGCGCTG CCAGAAGTTCAAGAGCAGGGACACCAGCTTGGAGCTGCTCTCGGAAGCCG AGTACTCCAGCGAGCTGCCAGACATGCCCAACGACGCGGAGGAGCTGTCC AGCCACAAGCAGCACCTTCATCGCCTCGACTGCGAGCTGCGTCTGCGGAA GGCACTCGACAAGCAGTACAGCGCCCTGCTGAGCTCCAAGCAGGAACTGC TCCAGGACAATCTTAGCCACGCCCAGCGGTACGTCTCCTTCGCACCCGCC TTGCGCACTCTGCAGAGCGCCACAAAGCCGCTGCACGATGCACTCCAGCT ATCCCTGGACGTGGAATGGAAGCTAAGCGCAGTGGTCAAGTACCTGCCCA AGCCGCTCTACGTTTTGTTCATTGTCCTGCAATCGCTGCAGCGGGTCAGC GAGGAGCAGTCCTTCACCGCCGAGGTGGTTGGCTATGAGAGCGAGGCTCA AATGCAGGAGTTGCTTAAGGAGAAAAAGTGCTCCACATTGAACTACAGAC AGACTAAAAAGGAAAGTGGAGACCGGGAAAAGATTGCCGATAAAAACAAC TTGGACGACTCACTCGCTCCTCACCCACTACACATTTGTTTGACGATTGG AGCGGCTGGATCGAATCAGCTCGTTTTGCAGATTCGCTACTTTGATTTTA TCAAGTGTGCCACTGTCTGGGGCCAACTTAACTGCTCCAGGAATGCCAAC GGCCAGGGTGACACAAACTTTGTTCACCACCTATTGCGGCATTTGTACCC CAATGACTTGGGCAATGAATTACCCATTCCGGGAATCCAATACGAGCTAC GAAGCTCGGATTTAACAGCCGAGGAATGTGTGCGCTACCTCAAGGCCAAG GACTACGGAAAACCCTTCTGTTGGCTGCAAAGTATGTGCTCGATTGCAAC CGTCAACAGTTCGATGCTGTACAAACACGAACTGAACTTGAATAAGAACA ACAAGGAGATTATTGACCGCATTGCCAGGCGCTTGAACTCTTGGCAGCGT TTAAGCCAGCAGATTCGCGGGCTGACCTTCAAGGATATCGATTTGTATAG CTTGCAGGAGAACATCTATCCAGCCGGCCTGTCGTGCAGTCTCGTCCAAT GGACTGCCATCACACATGAGGAGCTTCACTCGCAAATTTCAGACGCACTG AATTCTTCGTCAGCGGACAAGGGTATTACGTACAACTCTTACCGCGCTGT CATCGTCCGGGGATCGGCCAAAATGGAGTGCTTTATTAGAATACCGAGTA ACTATCCACTGGAAATGCCTCTATGGATTCTGAATGTGCACTGGAACGGA TGCCTTACCGCGCAAAACAATTCGGCGATCAAGATGATGGAGTTCTGGAC CAACTCCCTGCAGCCCAAACATTTGGAGCCCAACGACTGCATCCTGTACG CGCAGCTCTTCCGCACCATCTACAGCTTCGATATATTCCTCGAAACCGAG GGATCCATGCAAAACACCATTGAGTACAACAAGGAGAAGCCTTACATAAG CGCCTTCGCCAAGCGGAGCCGCTCACGCCCCTACAAATACATCAAGAAGG GATCGGTCTACGCGTTCAAGCAGTGACAGTTGAATAACGAATGTTGTACA ACACAATGCGCCAATGCGGTTACTAAACGTTCTCACAGTTGCGTTTATTA CGATTAGTAATACAATAAATAAGTAACATTTAAAGCTAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19840372..19841168 | 99..895 | 3940 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 19841534..19842072 | 1095..1633 | 2650 | 99.4 | Plus |
chr2R | 21145070 | chr2R | 19842127..19842482 | 1632..1987 | 1765 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 19841222..19841335 | 895..1008 | 555 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 19840214..19840314 | 1..101 | 505 | 100 | Plus |
chr2R | 21145070 | chr2R | 19841394..19841482 | 1008..1096 | 430 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23954297..23955093 | 99..895 | 3985 | 100 | Plus |
2R | 25286936 | 2R | 23955458..23955996 | 1095..1633 | 2695 | 100 | Plus |
2R | 25286936 | 2R | 23956051..23956407 | 1632..1988 | 1785 | 100 | Plus |
2R | 25286936 | 2R | 23955147..23955260 | 895..1008 | 570 | 100 | Plus |
2R | 25286936 | 2R | 23954139..23954239 | 1..101 | 505 | 100 | Plus |
2R | 25286936 | 2R | 23955318..23955413 | 1008..1103 | 450 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23955496..23956292 | 99..895 | 3985 | 100 | Plus |
2R | 25260384 | 2R | 23956657..23957195 | 1095..1633 | 2695 | 100 | Plus |
2R | 25260384 | 2R | 23957250..23957606 | 1632..1988 | 1785 | 100 | Plus |
2R | 25260384 | 2R | 23956346..23956459 | 895..1008 | 570 | 100 | Plus |
2R | 25260384 | 2R | 23955338..23955438 | 1..101 | 505 | 100 | Plus |
2R | 25260384 | 2R | 23956517..23956612 | 1008..1103 | 450 | 97.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19840214..19840313 | 1..100 | 100 | -> | Plus |
chr2R | 19840374..19841168 | 101..895 | 99 | -> | Plus |
chr2R | 19841223..19841335 | 896..1008 | 99 | -> | Plus |
chr2R | 19841395..19841482 | 1009..1096 | 98 | -> | Plus |
chr2R | 19841536..19842072 | 1097..1633 | 99 | -> | Plus |
chr2R | 19842129..19842482 | 1634..1987 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc5-RA | 1..1851 | 26..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc5-RA | 1..1851 | 26..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc5-RA | 1..1851 | 26..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc5-RA | 1..1851 | 26..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc5-RA | 1..1851 | 26..1876 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc5-RA | 47..2033 | 1..1987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc5-RA | 47..2033 | 1..1987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc5-RA | 49..2035 | 1..1987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc5-RA | 47..2033 | 1..1987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
thoc5-RA | 49..2035 | 1..1987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23955319..23955406 | 1009..1096 | 100 | -> | Plus |
2R | 23954139..23954238 | 1..100 | 100 | -> | Plus |
2R | 23954299..23955093 | 101..895 | 100 | -> | Plus |
2R | 23955148..23955260 | 896..1008 | 100 | -> | Plus |
2R | 23955460..23955996 | 1097..1633 | 100 | -> | Plus |
2R | 23956053..23956406 | 1634..1987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23955319..23955406 | 1009..1096 | 100 | -> | Plus |
2R | 23954139..23954238 | 1..100 | 100 | -> | Plus |
2R | 23954299..23955093 | 101..895 | 100 | -> | Plus |
2R | 23955148..23955260 | 896..1008 | 100 | -> | Plus |
2R | 23955460..23955996 | 1097..1633 | 100 | -> | Plus |
2R | 23956053..23956406 | 1634..1987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23955319..23955406 | 1009..1096 | 100 | -> | Plus |
2R | 23954139..23954238 | 1..100 | 100 | -> | Plus |
2R | 23954299..23955093 | 101..895 | 100 | -> | Plus |
2R | 23955148..23955260 | 896..1008 | 100 | -> | Plus |
2R | 23955460..23955996 | 1097..1633 | 100 | -> | Plus |
2R | 23956053..23956406 | 1634..1987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19841662..19841761 | 1..100 | 100 | -> | Plus |
arm_2R | 19841822..19842616 | 101..895 | 100 | -> | Plus |
arm_2R | 19842671..19842783 | 896..1008 | 100 | -> | Plus |
arm_2R | 19842842..19842929 | 1009..1096 | 100 | -> | Plus |
arm_2R | 19842983..19843519 | 1097..1633 | 100 | -> | Plus |
arm_2R | 19843576..19843929 | 1634..1987 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23955516..23956310 | 101..895 | 100 | -> | Plus |
2R | 23956365..23956477 | 896..1008 | 100 | -> | Plus |
2R | 23956536..23956623 | 1009..1096 | 100 | -> | Plus |
2R | 23956677..23957213 | 1097..1633 | 100 | -> | Plus |
2R | 23957270..23957623 | 1634..1987 | 100 | Plus | |
2R | 23955356..23955455 | 1..100 | 100 | -> | Plus |
Translation from 25 to 1875
> LD21694.pep METILNTQFDQLQKAIEGIKEAKSKGQSTDEARIATTLMFVALKHANREV KHKIKAGRDKLHLEKCKVDLSRLQLQNLLYEVSHLKKEIVRCQKFKSRDT SLELLSEAEYSSELPDMPNDAEELSSHKQHLHRLDCELRLRKALDKQYSA LLSSKQELLQDNLSHAQRYVSFAPALRTLQSATKPLHDALQLSLDVEWKL SAVVKYLPKPLYVLFIVLQSLQRVSEEQSFTAEVVGYESEAQMQELLKEK KCSTLNYRQTKKESGDREKIADKNNLDDSLAPHPLHICLTIGAAGSNQLV LQIRYFDFIKCATVWGQLNCSRNANGQGDTNFVHHLLRHLYPNDLGNELP IPGIQYELRSSDLTAEECVRYLKAKDYGKPFCWLQSMCSIATVNSSMLYK HELNLNKNNKEIIDRIARRLNSWQRLSQQIRGLTFKDIDLYSLQENIYPA GLSCSLVQWTAITHEELHSQISDALNSSSADKGITYNSYRAVIVRGSAKM ECFIRIPSNYPLEMPLWILNVHWNGCLTAQNNSAIKMMEFWTNSLQPKHL EPNDCILYAQLFRTIYSFDIFLETEGSMQNTIEYNKEKPYISAFAKRSRS RPYKYIKKGSVYAFKQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12880-PA | 610 | GF12880-PA | 1..610 | 1..616 | 2552 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22908-PA | 615 | GG22908-PA | 1..615 | 1..616 | 3033 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20183-PA | 617 | GH20183-PA | 1..617 | 1..616 | 2066 | 64 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
thoc5-PA | 616 | CG2980-PA | 1..616 | 1..616 | 3198 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18852-PA | 614 | GI18852-PA | 1..614 | 1..616 | 2045 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10911-PA | 616 | GL10911-PA | 1..616 | 1..616 | 2299 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25595-PA | 80 | GA25595-PA | 1..80 | 537..616 | 374 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16068-PA | 613 | GM16068-PA | 1..613 | 1..616 | 3157 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11814-PA | 616 | GD11814-PA | 1..616 | 1..616 | 3169 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21887-PA | 614 | GJ21887-PA | 1..614 | 1..616 | 2029 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15720-PA | 622 | GK15720-PA | 1..622 | 1..616 | 2008 | 62.9 | Plus |
Translation from 25 to 1875
> LD21694.hyp METILNTQFDQLQKAIEGIKEAKSKGQSTDEARIATTLMFVALKHANREV KHKIKAGRDKLHLEKCKVDLSRLQLQNLLYEVSHLKKEIVRCQKFKSRDT SLELLSEAEYSSELPDMPNDAEELSSHKQHLHRLDCELRLRKALDKQYSA LLSSKQELLQDNLSHAQRYVSFAPALRTLQSATKPLHDALQLSLDVEWKL SAVVKYLPKPLYVLFIVLQSLQRVSEEQSFTAEVVGYESEAQMQELLKEK KCSTLNYRQTKKESGDREKIADKNNLDDSLAPHPLHICLTIGAAGSNQLV LQIRYFDFIKCATVWGQLNCSRNANGQGDTNFVHHLLRHLYPNDLGNELP IPGIQYELRSSDLTAEECVRYLKAKDYGKPFCWLQSMCSIATVNSSMLYK HELNLNKNNKEIIDRIARRLNSWQRLSQQIRGLTFKDIDLYSLQENIYPA GLSCSLVQWTAITHEELHSQISDALNSSSADKGITYNSYRAVIVRGSAKM ECFIRIPSNYPLEMPLWILNVHWNGCLTAQNNSAIKMMEFWTNSLQPKHL EPNDCILYAQLFRTIYSFDIFLETEGSMQNTIEYNKEKPYISAFAKRSRS RPYKYIKKGSVYAFKQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
thoc5-PA | 616 | CG2980-PA | 1..616 | 1..616 | 3198 | 100 | Plus |