BDGP Sequence Production Resources |
Search the DGRC for LD21701
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 217 |
Well: | 1 |
Vector: | pOT2 |
Associated Gene/Transcript | crn-RA |
Protein status: | LD21701.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2282 |
Gene | Date | Evidence |
---|---|---|
CG3193 | 2001-07-04 | Blastp of sequenced clone |
CG3193 | 2003-01-01 | Sim4 clustering to Release 3 |
crn | 2008-04-29 | Release 5.5 accounting |
crn | 2008-08-15 | Release 5.9 accounting |
crn | 2008-12-18 | 5.12 accounting |
2282 bp (2282 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051666
> LD21701.complete TAGCGTTTTTCCAACATAACATTGCTAAGTGAGGGACCCCGAATCGCACA GCATGGAGCGGCCACAGAAGATGCCCAAGGTGGCCAAGGTCAAAAACAAA GCGCCGGCGGAGGTGCAAATTACGGCGGAGCAGTTGCTCCGTGAGGCCAA GGAGCGAGATCTGGAGATTCTGCCGCCGCCGCCAAAGCAGAAGATCTCCG ATCCCGCCGAGTTGGCAGACTATCAGCAGCGGAAGCGAAAGACCTTCGAG GACAATCTCCGCAAGAACCGCATGGTAGTCAGCCATTGGATCAAATATGC TCAGTGGGAGGAGCAGCAGCAGGAGATCCAGCGGGCGCGCTCTATCTGGG AGCGGGCGTTGGACAATGAGCACCGGAACGTGACCCTCTGGCTGAAATAC GCCGAGATGGAGATGAAGAACAAGCAGGTGAATCATGCTCGCAATCTGTG GGATCGGGCAGTGACCATCATGCCGCGAGTCAACCAGTTCTGGTACAAGT ACACCTACATGGAGGAGATGCTGGAGAATGTGGCAGGGGCGCGACAGGTG TTCGAGCGCTGGATGGAGTGGCAACCGGAGGAGCAGGCCTGGCAGACCTA CGTCAACTTCGAGCTGCGCTACAAGGAGATCGACCGGGCACGGGAGATCT ACGAGCGATTTGTCTATGTGCACCCGGACGTGAAGAACTGGATAAAGTTC GCCCGCTTTGAGGAGTCTCATGGGTTTATCCACGGCTCTCGGCGGGTATT TGAGCGCGCTGTGGAGTTCTTTGGTGACGACTACATCGAGGAGCGCCTGT TCATCGCCTTTGCACGTTTCGAGGAGGGTCAAAAGGAGCACGACAGGGCG CGCATCATCTACAAGTACGCTTTAGATCACCTACCTAAAGATCGCACACA GGAGCTGTTCAAGGCCTATACGAAACACGAGAAAAAGTACGGCGACAGAG CGGGTATTGAGGATGTGATTGTTTCCAAGCGCAAGTACCAGTACGAGCAG GAGGTGGCCGCCAATCCCACCAACTACGATGCCTGGTTCGACTATTTGCG CTTGATTGAGGCTGAGGGCGATCGGGATCAGATCCGTGAGACGTACGAAC GGGCCATTTCCAACGTGCCGCCTGCCAATGAAAAGAACTTCTGGCGACGC TACATTTACCTTTGGATCAATTATGCTTTGTACGAGGAGCTTGAAGCGGA GGACGCGGAACGCACGCGGCAGATCTACAAGACCTGTCTGGAGCTAATAC CTCACAAGCAGTTCACCTTCAGCAAGCTTTGGCTGCTGTACGCCCAATTC GAGATCCGCTGCAAGGAGCTGCAGCGAGCACGCAAAGCTCTGGGCTTGGC CATCGGCATGTGTCCCAGAGATAAGCTCTTCAGAGGCTATATTGATCTGG AGATTCAGTTGCGTGAGTTCGAGCGCTGCCGCATGCTGTACGAGAAGTTC CTGGAGTTTGGACCGGAGAATTGTGTCACTTGGATGAAGTTTGCCGAGCT GGAGAATCTGTTGGGCGACACGGACCGGGCGAGAGCCATTTTCGAGCTGG CGGTGCAGCAGCCGCGCCTGGACATGCCAGAGCTGCTGTGGAAGGCGTAC ATCGACTTCGAGGTAGCCCTAGGCGAAACAGAGCTAGCCAGACAGCTTTA CGAGCGACTCCTTGAGCGGACGCAGCATGTGAAAGTGTGGATGTCGTTTG CCAAGTTCGAGATGGGCCTCAGCCACGGCGACAGCGGGCCAGATGCGGAG CTGAACGTGCAGCTGGCAAGGAGAATCTATGAGCGAGCCAACGAGATGTT GCGTCAGCTGGGAGACAAGGAGTCGCGTGTTCTGTTGCTAGAGGCATGGC GCGACTTTGAACGCGACGCCTCCGATTCGCAGGAGATGCAAAAGGTAATG GACAAGATGCCGCGGCGCATCAAGAAGCGGCAAAAGATCGTCTCGGACAA TGGCGTCGAGGAAGGTTGGGAGGAGGTATTCGACTACATCTTTCCCGAGG ACGAAATGGCTCGACCCAATCTCAAGTTGCTGGCTGCAGCTAAGATGTGG AAGACACAAAAAGACAACACGGTGGACGACCCGCCCGCTACAGCTATTGC ATCTGAGCCAGAACCTGCAGCTGATGCTGCCCCAGCGGATACGACGGATA GCGGTGACTGATTCACTTCCGCCTAAAAATCGTTGCTTTTGAACAAAGCT AAATATCTGAAATTGCAGATTTTTCGCTTTATTTTTGGATACCTTAGTAA TAAACCACTTAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
crn-RA | 2443 | crn-RA | 163..2432 | 1..2270 | 11350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2141534..2143709 | 89..2264 | 100 | <- | Minus |
chrX | 2143768..2143855 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crn-RA | 1..2109 | 53..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crn-RA | 1..2109 | 53..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crn-RA | 1..2109 | 53..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crn-RA | 1..2109 | 53..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crn-RA | 1..2109 | 53..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crn-RA | 67..2330 | 1..2264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crn-RA | 67..2330 | 1..2264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crn-RA | 69..2332 | 1..2264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crn-RA | 67..2330 | 1..2264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crn-RA | 69..2332 | 1..2264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2247594..2249769 | 89..2264 | 100 | <- | Minus |
X | 2249828..2249915 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2247594..2249769 | 89..2264 | 100 | <- | Minus |
X | 2249828..2249915 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2247594..2249769 | 89..2264 | 100 | <- | Minus |
X | 2249828..2249915 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2141627..2143802 | 89..2264 | 100 | <- | Minus |
arm_X | 2143861..2143948 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2255692..2257867 | 89..2264 | 100 | <- | Minus |
X | 2257926..2258013 | 1..88 | 100 | Minus |
Translation from 52 to 2160
> LD21701.pep MERPQKMPKVAKVKNKAPAEVQITAEQLLREAKERDLEILPPPPKQKISD PAELADYQQRKRKTFEDNLRKNRMVVSHWIKYAQWEEQQQEIQRARSIWE RALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPRVNQFWYKY TYMEEMLENVAGARQVFERWMEWQPEEQAWQTYVNFELRYKEIDRAREIY ERFVYVHPDVKNWIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLF IAFARFEEGQKEHDRARIIYKYALDHLPKDRTQELFKAYTKHEKKYGDRA GIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYER AISNVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCLELIP HKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDKLFRGYIDLE IQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARAIFELA VQQPRLDMPELLWKAYIDFEVALGETELARQLYERLLERTQHVKVWMSFA KFEMGLSHGDSGPDAELNVQLARRIYERANEMLRQLGDKESRVLLLEAWR DFERDASDSQEMQKVMDKMPRRIKKRQKIVSDNGVEEGWEEVFDYIFPED EMARPNLKLLAAAKMWKTQKDNTVDDPPATAIASEPEPAADAAPADTTDS GD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22206-PA | 688 | GF22206-PA | 1..677 | 1..676 | 3387 | 95.3 | Plus |
Dana\GF13706-PA | 882 | GF13706-PA | 397..744 | 213..552 | 199 | 25.2 | Plus |
Dana\GF23653-PA | 931 | GF23653-PA | 302..778 | 79..554 | 185 | 22.2 | Plus |
Dana\GF13706-PA | 882 | GF13706-PA | 397..712 | 79..419 | 174 | 22 | Plus |
Dana\GF23653-PA | 931 | GF23653-PA | 533..852 | 79..422 | 161 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12634-PA | 702 | GG12634-PA | 1..702 | 1..702 | 3538 | 95.9 | Plus |
Dere\GG20394-PA | 882 | GG20394-PA | 397..744 | 213..552 | 197 | 25 | Plus |
Dere\GG16015-PA | 931 | GG16015-PA | 302..778 | 79..554 | 195 | 22.4 | Plus |
Dere\GG20394-PA | 882 | GG20394-PA | 397..712 | 79..419 | 179 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12311-PA | 707 | GH12311-PA | 1..688 | 1..690 | 3322 | 91.6 | Plus |
Dgri\GH23803-PA | 900 | GH23803-PA | 271..747 | 79..554 | 203 | 22.8 | Plus |
Dgri\GH21027-PA | 891 | GH21027-PA | 398..745 | 213..552 | 200 | 26.2 | Plus |
Dgri\GH23803-PA | 900 | GH23803-PA | 502..821 | 79..422 | 161 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
crn-PA | 702 | CG3193-PA | 1..702 | 1..702 | 3724 | 100 | Plus |
fand-PA | 883 | CG6197-PA | 397..763 | 213..565 | 235 | 25.7 | Plus |
fand-PA | 883 | CG6197-PA | 397..712 | 79..419 | 213 | 21.4 | Plus |
CG6841-PB | 931 | CG6841-PB | 302..778 | 79..554 | 211 | 22.6 | Plus |
CG6841-PA | 931 | CG6841-PA | 302..778 | 79..554 | 211 | 22.6 | Plus |
fand-PA | 883 | CG6197-PA | 439..790 | 19..355 | 161 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21455-PA | 705 | GI21455-PA | 1..705 | 1..697 | 3321 | 90.2 | Plus |
Dmoj\GI13491-PA | 899 | GI13491-PA | 302..746 | 79..554 | 196 | 22.4 | Plus |
Dmoj\GI13491-PA | 899 | GI13491-PA | 501..820 | 79..422 | 172 | 22.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13392-PA | 680 | GL13392-PA | 1..673 | 1..681 | 3230 | 91.1 | Plus |
Dper\GL17467-PA | 848 | GL17467-PA | 397..764 | 213..565 | 205 | 25.5 | Plus |
Dper\GL21701-PA | 915 | GL21701-PA | 286..762 | 79..554 | 186 | 22.2 | Plus |
Dper\GL17467-PA | 848 | GL17467-PA | 370..712 | 51..419 | 174 | 20.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22854-PA | 689 | GA22854-PA | 1..682 | 1..681 | 3343 | 93.3 | Plus |
Dpse\GA19432-PA | 884 | GA19432-PA | 397..764 | 213..565 | 206 | 25.5 | Plus |
Dpse\GA19898-PA | 931 | GA19898-PA | 302..778 | 79..554 | 188 | 22.2 | Plus |
Dpse\GA19432-PA | 884 | GA19432-PA | 370..712 | 51..419 | 176 | 20.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18901-PA | 702 | GM18901-PA | 1..702 | 1..702 | 3696 | 99 | Plus |
Dsec\GM15004-PA | 931 | GM15004-PA | 363..778 | 76..554 | 191 | 22.6 | Plus |
Dsec\GM15004-PA | 931 | GM15004-PA | 533..852 | 79..422 | 172 | 22.9 | Plus |
Dsec\GM21482-PA | 443 | GM21482-PA | 100..304 | 348..552 | 167 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24613-PA | 267 | GD24613-PA | 1..267 | 436..702 | 1383 | 97.8 | Plus |
Dsim\GD14782-PA | 931 | GD14782-PA | 302..778 | 79..554 | 198 | 22.4 | Plus |
Dsim\GD24613-PA | 267 | GD24613-PA | 7..148 | 112..240 | 164 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16476-PA | 693 | GJ16476-PA | 1..689 | 1..689 | 3351 | 91.7 | Plus |
Dvir\GJ21637-PA | 884 | GJ21637-PA | 397..744 | 213..552 | 205 | 26.5 | Plus |
Dvir\GJ11852-PA | 931 | GJ11852-PA | 302..778 | 79..554 | 205 | 22.8 | Plus |
Dvir\GJ21637-PA | 884 | GJ21637-PA | 397..712 | 79..419 | 176 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16333-PA | 693 | GK16333-PA | 1..674 | 1..672 | 3320 | 94.2 | Plus |
Dwil\GK15972-PA | 886 | GK15972-PA | 399..768 | 213..571 | 192 | 26 | Plus |
Dwil\GK10384-PA | 931 | GK10384-PA | 302..778 | 79..554 | 189 | 22 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16963-PA | 702 | GE16963-PA | 1..702 | 1..702 | 3641 | 97.3 | Plus |
Dyak\GE12556-PA | 882 | GE12556-PA | 397..744 | 213..552 | 197 | 25.8 | Plus |
Dyak\GE19580-PA | 931 | GE19580-PA | 302..778 | 79..554 | 196 | 22.4 | Plus |
Dyak\GE12556-PA | 882 | GE12556-PA | 397..712 | 79..419 | 180 | 22 | Plus |
Translation from 52 to 2160
> LD21701.hyp MERPQKMPKVAKVKNKAPAEVQITAEQLLREAKERDLEILPPPPKQKISD PAELADYQQRKRKTFEDNLRKNRMVVSHWIKYAQWEEQQQEIQRARSIWE RALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPRVNQFWYKY TYMEEMLENVAGARQVFERWMEWQPEEQAWQTYVNFELRYKEIDRAREIY ERFVYVHPDVKNWIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLF IAFARFEEGQKEHDRARIIYKYALDHLPKDRTQELFKAYTKHEKKYGDRA GIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYER AISNVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCLELIP HKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDKLFRGYIDLE IQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARAIFELA VQQPRLDMPELLWKAYIDFEVALGETELARQLYERLLERTQHVKVWMSFA KFEMGLSHGDSGPDAELNVQLARRIYERANEMLRQLGDKESRVLLLEAWR DFERDASDSQEMQKVMDKMPRRIKKRQKIVSDNGVEEGWEEVFDYIFPED EMARPNLKLLAAAKMWKTQKDNTVDDPPATAIASEPEPAADAAPADTTDS GD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
crn-PA | 702 | CG3193-PA | 1..702 | 1..702 | 3724 | 100 | Plus |
fand-PA | 883 | CG6197-PA | 397..763 | 213..565 | 235 | 25.7 | Plus |
fand-PA | 883 | CG6197-PA | 397..712 | 79..419 | 213 | 21.4 | Plus |
CG6841-PB | 931 | CG6841-PB | 302..778 | 79..554 | 211 | 22.6 | Plus |
CG6841-PA | 931 | CG6841-PA | 302..778 | 79..554 | 211 | 22.6 | Plus |
fand-PA | 883 | CG6197-PA | 439..790 | 19..355 | 161 | 20.7 | Plus |