BDGP Sequence Production Resources |
Search the DGRC for LD21713
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 217 |
Well: | 13 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5991-RA |
Protein status: | LD21713.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1907 |
Gene | Date | Evidence |
---|---|---|
CG5991 | 2001-01-01 | Release 2 assignment |
CG5991 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5991 | 2003-02-17 | Blastp of sequenced clone |
CG5991 | 2008-04-29 | Release 5.5 accounting |
CG5991 | 2008-08-15 | Release 5.9 accounting |
CG5991 | 2008-12-18 | 5.12 accounting |
1907 bp (1907 high quality bases) assembled on 2003-02-17
GenBank Submission: AY121648
> LD21713.complete CACAGCGATACGGAAGCAACAATTGAAACGTCCAGAACTCCTCCTCCCAC GAGTATTTAAATTCTGACACAAGAGTGCCTGAACCAAAATCCCACTCACC GAATGCTGGTGCTTTGATTTGCAACTGTTCCTAGGTTCCGGCTGAATCCC TAGATTTGCGGATCTACGCAACTCATTCACTCAAAAGCCAGCCGAATTTA TCGCGCCAGATTAAACAAACAGAAACAAAAAACAGAAGCCGAGACCAGTT CCACATCGTGCCATTTTTATCTGGGCATATAGGCAGACGTGATTACGTGA TTAGTGCGGCTGGGGCTGCCGTTTATCAATAGCGAGAGCAACAATGGTTT CCTACTTCGTACCTCGTGGCCGCTTCCTGCTGAAGGCCGGCAATCTCAGA CAGGTGGTGCAGCAGCAGCATCAGCCGGCCCAGCTACAGCTGCAGCCCAT TAAAGGACCACAGCCGCAGGCTCAGAATGCCAGTCTGCCGGTGGCCCGTC ACTTGCGCCAATTCTCCTCGAATCCAGCCTCCAAGGAGGCACCATTACAC CACCGGCGCCCGCAACATAAACAACAACCGAATCCTAGTCAGGAGTTAGC TCAGATTCGGCGCAATATACTCTCACGGTGGACGGGCTTCCTGTTGCGTT GGGCTCCCATGGGCATCTGTGTGTTTGGCGCCATCGAGTGGCAGTTGCAG AAGAACCGCTGCGAAAAGGAAGGAAAACCTCGGACAGCGTCCGAGCTCCA GTCGCGCATTTACTGCTCCCTGCCACTGCGCATAATCAGCCGTTGCTGGG GCTGGCTGGCCGCTTGCTACTTGCCTCCCAGTCTGCGTCCCTACGTCTAC GGATGGTATTCCAACACGTTTGATGTTAATTTGAGCGAGGCCATGTATCC GGAGTATGAGCACTACAATAGTCTGGCTGAGTTCTTTACCAGGCCACTTA AGGAGGGCGTTCGTGTCATCGATCAGCAGGCTCCACTGGTCTCCCCCGCC GACGGTAAGGTTCTACATTTTGGCAGCGCCTCGGACTCGCTAATAGAGCA GGTCAAGGGTGTTAGCTACAGTATCGAGGACTTCCTTGGCCCGCTGGAGA CTGTGGAGCAGGCAAATTCCGGTGCCTCCTATGCCCAGGCCCTCAAAAAG AAGAGCGATGGTTCTACGGAGCTGTACCAGTGCGTGATATATCTGGCTCC CGGAGATTACCATCGATTCCACTCTCCTACCGCTTGGAAGCCCACCATTC GTCGTCACTTCTCCGGCGAACTGCTGTCCGTGAGCCCCAAAGTTGCCGGC TGGCTGCCTGGTCTGTTTTGCCTCAACGAACGTGTGCTGTACATGGGCCA GTGGAAGCACGGATTCTTCTCCTACACCGCCGTGGGTGCCACAAACGTGG GATCCGTCGAAATCTACATGGATGCCGATCTGAAGACGAACCGTTGGACT GGATTCAATGTCGGCAAGCATCCGCCCAGCACCTACGAGTACGATGAACT GGTCTTGAACAAAGAACTAACAGAAGCGCCCAAGGAATTCGGCAAGGGGG ATCTGGTGGGCCAGTTCAATATGGGCAGCACCATAGTCCTGCTCTTCGAG GCGCCAAAGAATTTCAAATTTGATATTATCGCCGGTCAGAAGATCCGCGT TGGCGAGTCCCTCGGCCACATCGTCGGCTCCAAATGAAAATGGGAGCCAC AATTATGTACCGAATCAGTGCAAAGTCCTGTCCCCCAACTGCTCAGATCA CTTGTTGTATTAGCATTAGACGCTCGTGTCCTAGGCAAATGTATTTTGTG AACATCCTGCGAAGCTAACTCTGTGTATTGTTGCCATTTCAGTAGTTTTA AGCTATATTTTATACAATAAACGTCGAATTATATTTGAGAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19875121..19877009 | 1..1889 | 9310 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24051704..24053594 | 1..1891 | 9455 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23792535..23794425 | 1..1891 | 9455 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19875121..19877009 | 1..1889 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5991-RB | 1..1344 | 344..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5991-RB | 1..1344 | 344..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5991-RA | 1..1344 | 344..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5991-RB | 1..1344 | 344..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5991-RA | 1..1344 | 344..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5991-RC | 62..1950 | 1..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5991-RC | 62..1950 | 1..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5991-RA | 213..2101 | 1..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5991-RC | 62..1950 | 1..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5991-RA | 213..2101 | 1..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24051704..24053592 | 1..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24051704..24053592 | 1..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24051704..24053592 | 1..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19877426..19879314 | 1..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23792535..23794423 | 1..1889 | 100 | Plus |
Translation from 343 to 1686
> LD21713.pep MVSYFVPRGRFLLKAGNLRQVVQQQHQPAQLQLQPIKGPQPQAQNASLPV ARHLRQFSSNPASKEAPLHHRRPQHKQQPNPSQELAQIRRNILSRWTGFL LRWAPMGICVFGAIEWQLQKNRCEKEGKPRTASELQSRIYCSLPLRIISR CWGWLAACYLPPSLRPYVYGWYSNTFDVNLSEAMYPEYEHYNSLAEFFTR PLKEGVRVIDQQAPLVSPADGKVLHFGSASDSLIEQVKGVSYSIEDFLGP LETVEQANSGASYAQALKKKSDGSTELYQCVIYLAPGDYHRFHSPTAWKP TIRRHFSGELLSVSPKVAGWLPGLFCLNERVLYMGQWKHGFFSYTAVGAT NVGSVEIYMDADLKTNRWTGFNVGKHPPSTYEYDELVLNKELTEAPKEFG KGDLVGQFNMGSTIVLLFEAPKNFKFDIIAGQKIRVGESLGHIVGSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17036-PA | 448 | GF17036-PA | 1..448 | 1..447 | 2029 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11249-PA | 447 | GG11249-PA | 1..447 | 1..447 | 2339 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18487-PA | 437 | GH18487-PA | 1..436 | 1..447 | 1760 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pisd-PB | 447 | CG5991-PB | 1..447 | 1..447 | 2389 | 100 | Plus |
Pisd-PC | 447 | CG5991-PC | 1..447 | 1..447 | 2389 | 100 | Plus |
Pisd-PA | 447 | CG5991-PA | 1..447 | 1..447 | 2389 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24632-PA | 433 | GI24632-PA | 1..433 | 1..447 | 1793 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23396-PA | 449 | GL23396-PA | 1..449 | 1..447 | 1904 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19281-PA | 448 | GA19281-PA | 1..448 | 1..447 | 1891 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26553-PA | 447 | GM26553-PA | 1..447 | 1..447 | 2383 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21059-PA | 342 | GD21059-PA | 1..342 | 106..447 | 1842 | 99.7 | Plus |
Dsim\GD21058-PA | 75 | GD21058-PA | 1..73 | 1..73 | 284 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14194-PA | 435 | GJ14194-PA | 1..431 | 1..443 | 1790 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11150-PA | 444 | GK11150-PA | 1..441 | 1..444 | 1791 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23441-PA | 447 | GE23441-PA | 1..447 | 1..447 | 2340 | 96.9 | Plus |
Translation from 343 to 1686
> LD21713.hyp MVSYFVPRGRFLLKAGNLRQVVQQQHQPAQLQLQPIKGPQPQAQNASLPV ARHLRQFSSNPASKEAPLHHRRPQHKQQPNPSQELAQIRRNILSRWTGFL LRWAPMGICVFGAIEWQLQKNRCEKEGKPRTASELQSRIYCSLPLRIISR CWGWLAACYLPPSLRPYVYGWYSNTFDVNLSEAMYPEYEHYNSLAEFFTR PLKEGVRVIDQQAPLVSPADGKVLHFGSASDSLIEQVKGVSYSIEDFLGP LETVEQANSGASYAQALKKKSDGSTELYQCVIYLAPGDYHRFHSPTAWKP TIRRHFSGELLSVSPKVAGWLPGLFCLNERVLYMGQWKHGFFSYTAVGAT NVGSVEIYMDADLKTNRWTGFNVGKHPPSTYEYDELVLNKELTEAPKEFG KGDLVGQFNMGSTIVLLFEAPKNFKFDIIAGQKIRVGESLGHIVGSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5991-PB | 447 | CG5991-PB | 1..447 | 1..447 | 2389 | 100 | Plus |
CG5991-PC | 447 | CG5991-PC | 1..447 | 1..447 | 2389 | 100 | Plus |
CG5991-PA | 447 | CG5991-PA | 1..447 | 1..447 | 2389 | 100 | Plus |