Clone LD21720 Report

Search the DGRC for LD21720

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:217
Well:20
Vector:pOT2
Associated Gene/TranscriptCG7609-RB
Protein status:LD21720.pep: gold
Preliminary Size:2681
Sequenced Size:2720

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7609 2000-02-14 Blastp of sequenced clone
CG7609 2001-01-01 Release 2 assignment
CG7609 2003-01-01 Sim4 clustering to Release 3
CG7609 2008-04-29 Release 5.5 accounting
CG7609 2008-08-15 Release 5.9 accounting
CG7609 2008-12-18 5.12 accounting

Clone Sequence Records

LD21720.complete Sequence

2720 bp (2720 high quality bases) assembled on 2000-02-14

GenBank Submission: AF132181

> LD21720.complete
AAAAGATAGCGTCTTGTCTTATCAAATCACTGTTTTGCTTTCTGCGGGCG
AACTTGCAACTGCTGCAGGATGCCCGATTCCGTGGAGGACACCTCCACAA
TCTCGCTGCGGATATGCCTGGAAGGACACGCGAACGCCCTGGCCCTGAAT
AAGGACAACAACCAGATTGCTTTGGCCGGAAGAAGCTTGCTTAAGGTGTA
CTCCATAAACAGCAATGGCTTCACGGAATCGTGTAATATGCGCGGAAAGA
ACCAGAATCTTAGCTACTCCGCCAACGATGTGGCCTGGTCCACCTTGGAT
AGCAATCTTTTGGCTACGGCGGCCACGAACGGAGTGGTTTCCGTGTGGGA
TCTCTCCAAGTTCGGCAGGCAGAAGCAGCTGCTTGTCTACAACGAACATG
AGCGCACCGCTCATACCGTGACCTTTCACAGCAGCGAGCCCAACATCCTG
ATCTCCGGTTCTCAGGATGGCACCATCAAGTGTTTCGACATCCGATCGGA
TAAGTCAATCAACACCTACTTCTGCAACTCGGAATCAGTGCGGGATGTCA
AGTTCAGTCCACACACACAAAACATATTCTCCGCCGTCTCCGAGAATGGA
ACTGTCCAGTTGTGGGACATGCGGAAGTGGGACAAGTGCATGGTGCAGTT
TACGGCGCACTACGGGCCAGTCTACACATGCGACTGGCATCCCACAAGGA
ATTGGCTGGCCACCGGAAGTCGGGACAAGCAGATCAAGGTGTGGAACATG
GATGGCAGGCCGGGATTGGAGCACACCATTCACACAATCGCCGTAGTGGG
ACGGGTTAAGTGGCGACCAGAAAGAACTTATCACATCGCTAGTTGTGCCC
TTGTGGTGGACTACAGCGTTCATGTGTGGGACATCCGCAGACCCTACATC
CCCTTTGCCTCCTTCAACGAGCACACCAATGTGACTACTGGAATTGCGTG
GCAGGGCAGCGACTCGCACTGTCTTCTGTCCATCAGCAAGGACTCCACCA
TTTACAAACATGCTTTTAAGGATGCCACGAGGCCAGCGCTGAAGGCAAAT
GCCCAGGGAGCTAGCCTGGGCAGATTTGGGGACATCTCCTTTGCCAACAA
GATCAAGGAGTATGAACCCAAGACCAGCGGTGCATCCAATACCAAGTCTT
CTAGCTTCATTCGCCGTAAGACGAATGTGGCTGGCAGCATTCAGTTCCAT
TTGGACCATTCCAAAATGTACAAATTCATGGTAAACGACACGTTTTCCGG
CTATCCCCTAAGCGAATCTGTTTCAAGACCCACCCAAGAACACGAAAGTT
TTATTGGCTGTGCCAGGGAACTTGTTATCAGTGGGAAAAAACTATCGGAG
TTATGCGAGCACAATGCAGAGGTTTCCAAGAAATACGGCAAACATAATGC
CACCACATTGTGGAACTTTATCAAATTGTTCTACGGCAGCAATCACTTTG
AGCCTCCCTTCGAGCACCGCTCCTCCTTCTCGAATCAAAAGAATCCAATG
AACTCACGACGTGCCACGCAAGTAGCCAGCGATTGGCCACAGCAGCGAAC
TGAACTAGGCCAGGATCTCAATGGAAACACGCCGGAAACAGCCCACGAAA
TTGATGTGGCGAATGTGGACGATGATACGCTCGGCAGCAGTGGTGTGGAG
CATCCGCCTACGAGCTCAGTGATTCTGTCCGAAACGCAAATCATCAGCGA
GATTACCTTTGACAACTTTGAGCTCTTGCGCAATGGGTTTATCTACGTGG
GTCCCACAGAATGCCCGAAAGCTTTGGCCTTCCCCGCCCTTCATCACGAT
GTGCAGGCTGCACGACCACAACTGGATCTCAAGGCGTCCGATCACGAAAA
GTCACCTCCACCGCATGTTCCCACTGTCCTAAAAGTCAGCCATGTCCCGC
CCATACCCATGTGGGAACCGCATAAGTTCGTCTCCGATGCCCTCATGCTA
ATGAACGATGTGGGCGATGTGCAAACAGCTCTGACAGTCCTTATAGCGCT
GGGAGAAGCTCGGAAGCTCCTGCCCATTGACGATGCATTGGTGGAGCACT
GGTTTTACACCTACGTGGACCAGCTGCATCGCTATGAGCTGTGGAACGAG
GCCTGCGAGGTTATCAACCGCTCCTGGCTGAGATCGGTGCAGCAGCTCAA
CCAGCACTCGACCGCCATGCACACGAACTGTGGAGAGTGTGGACGTCCAA
TGGGCGGCAAGGTGGGATGGTACTGCGACAAGTGCAAGTCCATGCAGTCC
GCCAAGTGCTGCGTCTGCGGTCTGATCGTCCGGGGAGTCTACGCCTGGTG
CCAAGGATGCTCCCACGGCGGTCACATAGAGCACCTGCAGAAGTACTTTG
CCAAACACTCCAAGTGCCCCAAGTGCGGACACCTTTGCGCGTACTCATGA
GACGCGGAGGAGGCTGGGTTTGCCCAGCTTTTGCCCCCCATTTGAGAGCC
TTGTAAATAGAGAAGACTTAAGCCCAATAAGTACCTTGCACTAGACACTA
AACAGATTTTTATATAAATGTAGCTCGAAGATGTAAACTTGTAAAATAAG
CTCAACGTTTGTGAAGTAAATTAACAGACAGGTTTAATCGATCTTCTGCA
ACTTTAAATAGCACAAATGTTTGTTACTTAACTTTTTTTGAAATATTGGA
AAATAAAACTGTTGTTTGTTGATGCAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

LD21720.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:42:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG7609-RB 2746 CG7609-RB 66..2742 1..2677 13370 99.9 Plus
CG7609.a 2698 CG7609.a 228..2694 211..2677 12320 99.9 Plus
CG7609-RA 2821 CG7609-RA 12..1868 1..1857 9285 100 Plus
CG7609-RA 2821 CG7609-RA 2183..2817 2043..2677 3160 99.8 Plus
CG7609-RA 2821 CG7609-RA 1935..2121 1858..2044 935 100 Plus
CG7609.a 2698 CG7609.a 22..208 1..187 935 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:29:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25566787..25567426 827..188 3155 99.5 Minus
chr3R 27901430 chr3R 25564574..25565206 2675..2043 3105 99.4 Minus
chr3R 27901430 chr3R 25565521..25565979 1857..1399 2280 99.8 Minus
chr3R 27901430 chr3R 25566392..25566724 1160..828 1605 98.8 Minus
chr3R 27901430 chr3R 25565268..25565454 2044..1858 935 100 Minus
chr3R 27901430 chr3R 25567485..25567671 187..1 935 100 Minus
chr3R 27901430 chr3R 25566037..25566194 1399..1242 745 98.1 Minus
chr3R 27901430 chr3R 25566254..25566335 1242..1161 410 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:09:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:29:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29744184..29744823 827..188 3200 100 Minus
3R 32079331 3R 29741970..29742604 2677..2043 3160 99.8 Minus
3R 32079331 3R 29742919..29743377 1857..1399 2295 100 Minus
3R 32079331 3R 29743789..29744121 1160..828 1665 100 Minus
3R 32079331 3R 29742666..29742852 2044..1858 935 100 Minus
3R 32079331 3R 29744882..29745068 187..1 935 100 Minus
3R 32079331 3R 29743434..29743591 1399..1242 790 100 Minus
3R 32079331 3R 29743651..29743732 1242..1161 410 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:03:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 29485015..29485654 827..188 3200 100 Minus
3R 31820162 3R 29482801..29483435 2677..2043 3160 99.8 Minus
3R 31820162 3R 29483750..29484208 1857..1399 2295 100 Minus
3R 31820162 3R 29484620..29484952 1160..828 1665 100 Minus
3R 31820162 3R 29485713..29485899 187..1 935 100 Minus
3R 31820162 3R 29483497..29483683 2044..1858 935 100 Minus
3R 31820162 3R 29484265..29484422 1399..1242 790 100 Minus
3R 31820162 3R 29484482..29484563 1242..1161 410 100 Minus
Blast to na_te.dros performed 2019-03-16 08:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\BuT2 2775 Dbuz\BuT2 BUT2 2775bp 2360..2445 2480..2560 128 67.4 Plus

LD21720.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:30:50 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25566392..25566724 828..1160 98 <- Minus
chr3R 25564574..25565205 2044..2675 99 <- Minus
chr3R 25565269..25565454 1858..2043 100 <- Minus
chr3R 25565521..25565979 1399..1857 99 <- Minus
chr3R 25566038..25566193 1243..1398 98 <- Minus
chr3R 25566254..25566335 1161..1242 100 <- Minus
chr3R 25566787..25567426 188..827 99 <- Minus
chr3R 25567485..25567671 1..187 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:57:07 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
CG7609-RB 1..2331 70..2400 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:35:49 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
CG7609-RB 1..2331 70..2400 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:55:03 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
CG7609-RB 1..2331 70..2400 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:11:44 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
CG7609-RB 1..2331 70..2400 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:41:48 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
CG7609-RB 1..2331 70..2400 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:38:55 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
CG7609-RB 1..2675 1..2675 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:35:49 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
CG7609-RB 1..2675 1..2675 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:55:03 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
CG7609-RB 25..2699 1..2675 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:11:44 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
CG7609-RB 1..2675 1..2675 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:41:48 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
CG7609-RB 25..2699 1..2675 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:30:50 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29744882..29745068 1..187 100   Minus
3R 29741972..29742603 2044..2675 99 <- Minus
3R 29742667..29742852 1858..2043 100 <- Minus
3R 29742919..29743377 1399..1857 100 <- Minus
3R 29743435..29743590 1243..1398 100 <- Minus
3R 29743651..29743732 1161..1242 100 <- Minus
3R 29743789..29744121 828..1160 100 <- Minus
3R 29744184..29744823 188..827 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:30:50 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29744882..29745068 1..187 100   Minus
3R 29741972..29742603 2044..2675 99 <- Minus
3R 29742667..29742852 1858..2043 100 <- Minus
3R 29742919..29743377 1399..1857 100 <- Minus
3R 29743435..29743590 1243..1398 100 <- Minus
3R 29743651..29743732 1161..1242 100 <- Minus
3R 29743789..29744121 828..1160 100 <- Minus
3R 29744184..29744823 188..827 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:30:50 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29744882..29745068 1..187 100   Minus
3R 29741972..29742603 2044..2675 99 <- Minus
3R 29742667..29742852 1858..2043 100 <- Minus
3R 29742919..29743377 1399..1857 100 <- Minus
3R 29743435..29743590 1243..1398 100 <- Minus
3R 29743651..29743732 1161..1242 100 <- Minus
3R 29743789..29744121 828..1160 100 <- Minus
3R 29744184..29744823 188..827 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:55:03 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25570604..25570790 1..187 100   Minus
arm_3R 25567694..25568325 2044..2675 99 <- Minus
arm_3R 25568389..25568574 1858..2043 100 <- Minus
arm_3R 25568641..25569099 1399..1857 100 <- Minus
arm_3R 25569157..25569312 1243..1398 100 <- Minus
arm_3R 25569373..25569454 1161..1242 100 <- Minus
arm_3R 25569511..25569843 828..1160 100 <- Minus
arm_3R 25569906..25570545 188..827 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:48:10 Download gff for LD21720.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29482803..29483434 2044..2675 99 <- Minus
3R 29483498..29483683 1858..2043 100 <- Minus
3R 29483750..29484208 1399..1857 100 <- Minus
3R 29484266..29484421 1243..1398 100 <- Minus
3R 29484482..29484563 1161..1242 100 <- Minus
3R 29484620..29484952 828..1160 100 <- Minus
3R 29485015..29485654 188..827 100 <- Minus
3R 29485713..29485899 1..187 100   Minus

LD21720.pep Sequence

Translation from 69 to 2399

> LD21720.pep
MPDSVEDTSTISLRICLEGHANALALNKDNNQIALAGRSLLKVYSINSNG
FTESCNMRGKNQNLSYSANDVAWSTLDSNLLATAATNGVVSVWDLSKFGR
QKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSDKSINTY
FCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGP
VYTCDWHPTRNWLATGSRDKQIKVWNMDGRPGLEHTIHTIAVVGRVKWRP
ERTYHIASCALVVDYSVHVWDIRRPYIPFASFNEHTNVTTGIAWQGSDSH
CLLSISKDSTIYKHAFKDATRPALKANAQGASLGRFGDISFANKIKEYEP
KTSGASNTKSSSFIRRKTNVAGSIQFHLDHSKMYKFMVNDTFSGYPLSES
VSRPTQEHESFIGCARELVISGKKLSELCEHNAEVSKKYGKHNATTLWNF
IKLFYGSNHFEPPFEHRSSFSNQKNPMNSRRATQVASDWPQQRTELGQDL
NGNTPETAHEIDVANVDDDTLGSSGVEHPPTSSVILSETQIISEITFDNF
ELLRNGFIYVGPTECPKALAFPALHHDVQAARPQLDLKASDHEKSPPPHV
PTVLKVSHVPPIPMWEPHKFVSDALMLMNDVGDVQTALTVLIALGEARKL
LPIDDALVEHWFYTYVDQLHRYELWNEACEVINRSWLRSVQQLNQHSTAM
HTNCGECGRPMGGKVGWYCDKCKSMQSAKCCVCGLIVRGVYAWCQGCSHG
GHIEHLQKYFAKHSKCPKCGHLCAYS*

LD21720.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:00:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22867-PA 778 GF22867-PA 1..778 1..776 3987 93.8 Plus
Dana\GF24344-PA 338 GF24344-PA 35..326 34..312 223 26.2 Plus
Dana\GF22217-PA 361 GF22217-PA 63..357 12..270 170 25.6 Plus
Dana\GF15640-PA 1001 GF15640-PA 82..360 18..295 168 24.2 Plus
Dana\GF13988-PA 579 GF13988-PA 336..575 69..270 160 25.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:00:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12005-PA 777 GG12005-PA 1..777 1..776 4192 99 Plus
Dere\GG14336-PA 345 GG14336-PA 81..329 70..309 210 26.5 Plus
Dere\GG23705-PA 969 GG23705-PA 40..338 18..311 174 24.3 Plus
Dere\GG12938-PA 361 GG12938-PA 63..357 12..270 172 25.6 Plus
Dere\GG13777-PA 390 GG13777-PA 60..296 65..303 162 23.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:00:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13986-PA 784 GH13986-PA 11..784 9..776 3527 83.9 Plus
Dgri\GH15320-PA 335 GH15320-PA 35..326 34..311 225 26.4 Plus
Dgri\GH10306-PA 997 GH10306-PA 41..339 18..311 178 24.6 Plus
Dgri\GH24921-PA 357 GH24921-PA 59..353 12..270 173 25.6 Plus
Dgri\GH15519-PA 1238 GH15519-PA 24..166 81..229 170 27.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
Wdr24-PB 776 CG7609-PB 1..776 1..776 4202 100 Plus
Wdr24-PC 777 CG7609-PC 1..777 1..776 4190 99.9 Plus
Pex7-PB 339 CG6486-PB 36..323 35..309 236 26.7 Plus
Pex7-PA 339 CG6486-PA 36..323 35..309 236 26.7 Plus
wds-PB 361 CG17437-PB 63..357 12..270 184 26.1 Plus
wds-PA 361 CG17437-PA 63..357 12..270 184 26.1 Plus
Wdr59-PD 969 CG4705-PD 40..338 18..311 184 24.3 Plus
Wdr59-PB 969 CG4705-PB 40..338 18..311 184 24.3 Plus
CG10931-PA 345 CG10931-PA 151..340 78..270 169 26.9 Plus
ebi-PA 700 CG4063-PA 451..699 18..274 168 26 Plus
wds-PB 361 CG17437-PB 10..311 19..312 163 23.5 Plus
wds-PA 361 CG17437-PA 10..311 19..312 163 23.5 Plus
Poc1-PA 391 CG10191-PA 60..278 65..294 160 23 Plus
Poc1-PB 403 CG10191-PB 60..278 65..294 160 23 Plus
Caf1-55-PB 429 CG4236-PB 235..407 70..227 160 23.1 Plus
Caf1-55-PA 430 CG4236-PA 236..408 70..227 160 23.1 Plus
Taf5-PA 704 CG7704-PA 461..639 123..318 159 27.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22331-PA 783 GI22331-PA 1..783 1..776 3476 81.4 Plus
Dmoj\GI12919-PA 320 GI12919-PA 56..311 45..311 193 24.4 Plus
Dmoj\GI21774-PA 358 GI21774-PA 60..354 12..270 172 25.6 Plus
Dmoj\GI17068-PA 977 GI17068-PA 38..336 18..311 171 24.3 Plus
Dmoj\GI16798-PA 1236 GI16798-PA 24..166 81..229 170 27.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:00:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13576-PA 772 GL13576-PA 7..772 14..776 3731 88.9 Plus
Dper\GL21757-PA 442 GL21757-PA 199..422 71..272 172 22.2 Plus
Dper\GL13093-PA 356 GL13093-PA 58..352 12..270 171 25.2 Plus
Dper\GL20730-PA 1235 GL20730-PA 24..166 81..229 167 27.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20478-PA 772 GA20478-PA 7..772 14..776 3731 88.9 Plus
Dpse\GA19630-PA 336 GA19630-PA 35..320 34..309 235 28.2 Plus
Dpse\GA26389-PB 440 GA26389-PB 197..420 71..272 178 22.2 Plus
Dpse\GA18371-PA 986 GA18371-PA 54..404 18..374 174 23.3 Plus
Dpse\GA14510-PA 356 GA14510-PA 58..352 12..270 171 25.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12225-PA 777 GM12225-PA 1..777 1..776 4202 99.5 Plus
Dsec\GM25079-PA 339 GM25079-PA 35..323 34..309 222 26.3 Plus
Dsec\GM19230-PA 361 GM19230-PA 63..357 12..270 173 25.6 Plus
Dsec\GM18873-PA 483 GM18873-PA 40..338 18..311 171 24.3 Plus
Dsec\GM21820-PA 353 GM21820-PA 150..339 78..270 164 27.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:00:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17676-PA 378 GD17676-PA 1..364 1..364 1959 99.5 Plus
Dsim\GD14117-PA 339 GD14117-PA 35..323 34..309 218 27 Plus
Dsim\GD16610-PA 361 GD16610-PA 63..357 12..270 173 25.6 Plus
Dsim\GD23761-PA 967 GD23761-PA 38..336 18..311 173 24.3 Plus
Dsim\GD11312-PA 353 GD11312-PA 150..339 78..270 165 27.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10519-PA 783 GJ10519-PA 1..783 1..776 3565 83.9 Plus
Dvir\GJ13063-PA 321 GJ13063-PA 77..312 70..311 197 25.2 Plus
Dvir\GJ10542-PA 989 GJ10542-PA 38..316 18..295 183 25.3 Plus
Dvir\GJ16947-PA 358 GJ16947-PA 60..354 12..270 171 25.6 Plus
Dvir\GJ12542-PA 1237 GJ12542-PA 24..166 81..229 170 27.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11167-PA 695 GK11167-PA 1..691 1..704 3126 83.5 Plus
Dwil\GK16726-PA 335 GK16726-PA 51..321 45..311 225 25.4 Plus
Dwil\GK19997-PA 358 GK19997-PA 60..354 12..270 171 25.6 Plus
Dwil\GK23658-PA 1234 GK23658-PA 24..166 81..229 167 27.5 Plus
Dwil\GK19416-PA 346 GK19416-PA 67..258 79..275 162 25 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10431-PA 777 GE10431-PA 1..777 1..776 4190 99 Plus
Dyak\GE20764-PA 340 GE20764-PA 35..324 34..309 218 26.9 Plus
Dyak\GE18512-PA 969 GE18512-PA 40..338 18..311 173 24.3 Plus
Dyak\GE16263-PA 361 GE16263-PA 63..357 12..270 172 25.6 Plus
Dyak\GE10153-PA 801 GE10153-PA 151..382 71..311 164 23.7 Plus

LD21720.hyp Sequence

Translation from 69 to 2399

> LD21720.hyp
MPDSVEDTSTISLRICLEGHANALALNKDNNQIALAGRSLLKVYSINSNG
FTESCNMRGKNQNLSYSANDVAWSTLDSNLLATAATNGVVSVWDLSKFGR
QKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSDKSINTY
FCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGP
VYTCDWHPTRNWLATGSRDKQIKVWNMDGRPGLEHTIHTIAVVGRVKWRP
ERTYHIASCALVVDYSVHVWDIRRPYIPFASFNEHTNVTTGIAWQGSDSH
CLLSISKDSTIYKHAFKDATRPALKANAQGASLGRFGDISFANKIKEYEP
KTSGASNTKSSSFIRRKTNVAGSIQFHLDHSKMYKFMVNDTFSGYPLSES
VSRPTQEHESFIGCARELVISGKKLSELCEHNAEVSKKYGKHNATTLWNF
IKLFYGSNHFEPPFEHRSSFSNQKNPMNSRRATQVASDWPQQRTELGQDL
NGNTPETAHEIDVANVDDDTLGSSGVEHPPTSSVILSETQIISEITFDNF
ELLRNGFIYVGPTECPKALAFPALHHDVQAARPQLDLKASDHEKSPPPHV
PTVLKVSHVPPIPMWEPHKFVSDALMLMNDVGDVQTALTVLIALGEARKL
LPIDDALVEHWFYTYVDQLHRYELWNEACEVINRSWLRSVQQLNQHSTAM
HTNCGECGRPMGGKVGWYCDKCKSMQSAKCCVCGLIVRGVYAWCQGCSHG
GHIEHLQKYFAKHSKCPKCGHLCAYS*

LD21720.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:40:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7609-PB 776 CG7609-PB 1..776 1..776 4202 100 Plus
CG7609-PC 777 CG7609-PC 1..777 1..776 4190 99.9 Plus
Pex7-PB 339 CG6486-PB 36..323 35..309 236 26.7 Plus
Pex7-PA 339 CG6486-PA 36..323 35..309 236 26.7 Plus
wds-PB 361 CG17437-PB 63..357 12..270 184 26.1 Plus