BDGP Sequence Production Resources |
Search the DGRC for LD21723
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 217 |
Well: | 23 |
Vector: | pOT2 |
Associated Gene/Transcript | Rpn1-RA |
Protein status: | LD21723.pep: gold |
Preliminary Size: | 3013 |
Sequenced Size: | 3006 |
Gene | Date | Evidence |
---|---|---|
CG7762 | 2000-02-14 | Blastp of sequenced clone |
CG7762 | 2001-01-01 | Release 2 assignment |
CG7762 | 2003-01-01 | Sim4 clustering to Release 3 |
Rpn1 | 2008-04-29 | Release 5.5 accounting |
Rpn1 | 2008-08-15 | Release 5.9 accounting |
Rpn1 | 2008-12-18 | 5.12 accounting |
3006 bp (3006 high quality bases) assembled on 2000-02-14
GenBank Submission: AF132182
> LD21723.complete AACAAAGCCGCATAAACCGCATTACAATCGAAGAAAACGTAGTGCCAATT AAATCCCTTAAGTCCGACAAGCTAGGAAAGAAATCATGACGGGCGAGACC AAGCTGGAGAAGAAGCCGCTGAAGCCGGCGGCATCCGAAGGCGATGCCAA GGATCCGAAGGCCAAGAAGGATGAAAAGAAGGACGGCAAGGACAAGGAGC AGCAGCCGGAGCTCTCCGACGAGGACCAGCAGCTGCAGGAGGAGCTGGAG CTGCTGGTGCAGCACTTGCAGGAGCCGGATGCCAAGCTCTACCAGCCGAC GCTGGAGAGTATGGCCAAATTGATCAGAGCCTCCACGACGTCGATGACCT CGGTGCCCAAGCCTTTGAAGTTCATGCGCCCGCACTACGAAACCATGAAG ACGGTGTACAAGCACATGCCCAATGAGCAGGCTCGCCAGTTGTGCGCCGA CATCATCTCAGTGCTCTCGATGACCATGGGCAGCGGCAAGGATTGCCTGG CCTACCGATTCCTCTGCGATCGCAAGCAGCGCATCGGGGACTGGGGCCAT GAGTATGTGCGTCATTTGTCTGGCGAAATTTCGGCCCACTATCACGATAC AACGGGAGACTTTCGTGTACAGCTCATCGAACTGGTCAAGCAGATCATCC CGTACAATATGGAGCACAATGCCGAGGCTGATGCCTGCGATCTGCTGATC GAAATCGATCACTTGCACCTGCTGAGCGACTTTGTGGACGAGTCGGCCTA TCCCCGCGTCTGTCTCTATCTGCAGTCCTGCTATCCGTATGTTCCCGACC CGGACAACACCATTATCCTGGAAACCGCGCTCCAGCTGTCGCGCAAGTTC AACCAGTACACACAGGCCATGCGACTGGCGTTGATGCTCAACGATATGGA CAAGATCGGTGAGATCTTCAAGGAGCCCAAGGAGCCGGCCATGCAGAAGC AGCTGGCCTTTATGCTGGCCCGCCAACAGATTTGCCTGGAGCTGGATGAA TTGGTGCCGGACTACGATGATCTCATGGAGATCATGTCGAATGCTAATCT GAACAAGCATTTCCTCAATCTGGCTCGCGAACTGGACATCATGGAGCCCA AAACGCCTGAGGACATTTACAAGTCGCATTTGGACAACTCGCGCTCCCGC TTTGCATCCATCCAGGTAGACTCTGCCAAGCAAAATCTGGCCGCTAGCTT TGTAAATGGTTTTGTTAACGCCGGTTTCGGTGTGGACAAGTTGCTGTCGG AAGACGGAAACAAATGGTTGTACAAGAACAAGGAGCACGGCATGCTCTCG GCCACCGCATCGCTGGGTTTGATACTTCTGTGGGATGTGGATGGTGGTCT GACCATGATCGATAAGTACTTGTACTCCACCGATGACAACATCAAGTCCG GCGCTTTGCTGGCTTGCGGAATCGTCAACTGCGGCATCCGTAACGAAGTC GATCCGGCTCATGCTCTGCTCTCCGATTATATCGACAACCAGAACTCCTG CATGCGCGTTGGCGCCATCCTCGGTCTGGGCATCGCCTACGCTGGCTCCA ATCGCTCCATTGTGATCGACACCCTGAAGACGGTCTTCTCGTTTGGCAGC AACAACAAGAGTTCGGCCAGCGTGGAGATATTGGGTATTACGGCTCTGTC GCTGGGTCTCATCAGTGTTGGTTCGTGCAATTCGGAGATCACCGAGATCT TGCTGCAGACGATTATGGGTCTGACCAAGGCCGATCTGAAGGACACCTAC ACGAGGTTCCTGTTTTTGGGTCTGGGTCTGCTTTACTTGGGCCGCCAAAA GTCCACCGAAGCCGTGATGATGACCTTGGAGGTTTTGGAAGAGCCGTACC GCAGCATGGCCACTACCATGGTGGACATTTGCGCATACGCTGGTACTGGC AACGTCCTCAAGATCCAACAGCTGCTCCACATCTGCTCCGATCACTACGA GACGTCCAGTGCCGATGACGAGAAGGAAAAGAGCAAGAAGGACAAGGGCA AGGATAAGGAAAAGGAGAAGGAGAAAGAGAAGGAAAAGGAACGCGAGAAG GACTTGTCGGCCACCCAATCGATCGCCGTGCTGGGAATTGCCCTGATCGC CATGGGCGAGGACATTGGTGCCGAAATGGCATACCGCTCGTTTGGAAACC TGCTGCGCTATTGCGAGCCAGCCATTCGTCGGGCCGTACCACTGGCATTG GGCCTGATATCCGCCTCCAATCCCAAGCTGAACATCATCGACACGCTGAG CAAGTTCTCGCACGATAGCGACGCCGAGGTGGCCCACAATGCGATCTTCG CCATGGGCTTGGTGGGCGCCGGCACGAATAACGCTCGGCTGGCCTCCATG CTACGCCAGTTGGCGCAGTACCATTCTAAGGATCCCAGCAATCTGTTCAT GGTGCGCATCGCCCAGAGCTTGACGCACTTGGGCAAGGGCACGCTCTCGC TGAGTCCCTACCACAGCGATAGGCAGCTGATGAACCCCATGGCCGTCGCT GGACTGATGGCTACGCTGGTTTCCCTGCTGGACGTGAAGAACCTGATACT GAACCGATCGCACTATCTGCTCTACACACTGGTGCCTGCCATGCAGGCTC GCATGCTGATCACCTTCGATGAGGAGCTCAATCAGCTGCAGGTGCCCGTG CGCGTCGGCATTGCCATCGATGTGGTCGGCCAGGCAGGCAAGCCGAAGAC CATCACCGGCTTCCAAACGCACACCACGCCCGTCCTGCTGGCCATTGGCG AGCGCGCCGAGCTGGCCACCGATGAGTATCTGGCCCTCACTCCGGTCATG GAGGGCTTCGTTATACTGAAAAAGAACCCAAATTTTGTGAAATAGAAGTG CATTCAAACATTTAACGTTTAAGGTCATGCGAGAAACTGAAGTTCAGCCA CTAACTCCCAATAATTATTTGTTCCCCCCACTGGCAGTTGATTCAAATGA TTCAATTAATACGAAATATATCTACATATAAAGAATAAAAAAAAAAAAAA AAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19904432..19906440 | 1..2009 | 99 | == | Plus |
chr3L | 19906541..19907486 | 2041..2986 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn1-RA | 1..2760 | 86..2845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn1-RA | 1..2760 | 86..2845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn1-RA | 1..2760 | 86..2845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn1-RA | 1..2760 | 86..2845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn1-RA | 1..2760 | 86..2845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn1-RA | 51..3036 | 1..2986 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn1-RA | 51..3036 | 1..2986 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn1-RA | 56..3041 | 1..2986 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn1-RA | 51..3036 | 1..2986 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn1-RA | 56..3041 | 1..2986 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19915106..19917113 | 1..2008 | 100 | -> | Plus |
3L | 19917183..19918160 | 2009..2986 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19915106..19917113 | 1..2008 | 100 | -> | Plus |
3L | 19917183..19918160 | 2009..2986 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19915106..19917113 | 1..2008 | 100 | -> | Plus |
3L | 19917183..19918160 | 2009..2986 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19908206..19910213 | 1..2008 | 100 | -> | Plus |
arm_3L | 19910283..19911260 | 2009..2986 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19908206..19910213 | 1..2008 | 100 | -> | Plus |
3L | 19910283..19911260 | 2009..2986 | 100 | Plus |
Translation from 85 to 2844
> LD21723.pep MTGETKLEKKPLKPAASEGDAKDPKAKKDEKKDGKDKEQQPELSDEDQQL QEELELLVQHLQEPDAKLYQPTLESMAKLIRASTTSMTSVPKPLKFMRPH YETMKTVYKHMPNEQARQLCADIISVLSMTMGSGKDCLAYRFLCDRKQRI GDWGHEYVRHLSGEISAHYHDTTGDFRVQLIELVKQIIPYNMEHNAEADA CDLLIEIDHLHLLSDFVDESAYPRVCLYLQSCYPYVPDPDNTIILETALQ LSRKFNQYTQAMRLALMLNDMDKIGEIFKEPKEPAMQKQLAFMLARQQIC LELDELVPDYDDLMEIMSNANLNKHFLNLARELDIMEPKTPEDIYKSHLD NSRSRFASIQVDSAKQNLAASFVNGFVNAGFGVDKLLSEDGNKWLYKNKE HGMLSATASLGLILLWDVDGGLTMIDKYLYSTDDNIKSGALLACGIVNCG IRNEVDPAHALLSDYIDNQNSCMRVGAILGLGIAYAGSNRSIVIDTLKTV FSFGSNNKSSASVEILGITALSLGLISVGSCNSEITEILLQTIMGLTKAD LKDTYTRFLFLGLGLLYLGRQKSTEAVMMTLEVLEEPYRSMATTMVDICA YAGTGNVLKIQQLLHICSDHYETSSADDEKEKSKKDKGKDKEKEKEKEKE KEREKDLSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAIRRA VPLALGLISASNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNA RLASMLRQLAQYHSKDPSNLFMVRIAQSLTHLGKGTLSLSPYHSDRQLMN PMAVAGLMATLVSLLDVKNLILNRSHYLLYTLVPAMQARMLITFDEELNQ LQVPVRVGIAIDVVGQAGKPKTITGFQTHTTPVLLAIGERAELATDEYLA LTPVMEGFVILKKNPNFVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23601-PA | 923 | GF23601-PA | 1..923 | 1..919 | 4305 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16067-PA | 919 | GG16067-PA | 1..919 | 1..919 | 4865 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14666-PA | 931 | GH14666-PA | 1..931 | 1..919 | 4312 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpn1-PA | 919 | CG7762-PA | 1..919 | 1..919 | 4689 | 100 | Plus |
Rpn2-PC | 1020 | CG11888-PC | 333..620 | 325..616 | 187 | 25.2 | Plus |
Rpn2-PA | 1020 | CG11888-PA | 333..620 | 325..616 | 187 | 25.2 | Plus |
Rpn2-PB | 1029 | CG11888-PB | 333..620 | 325..616 | 187 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11652-PA | 921 | GI11652-PA | 1..921 | 1..919 | 4306 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22667-PA | 917 | GL22667-PA | 1..917 | 1..919 | 4317 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20570-PA | 918 | GA20570-PA | 1..918 | 1..919 | 4312 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19685-PA | 919 | GM19685-PA | 1..919 | 1..919 | 4891 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14837-PA | 919 | GD14837-PA | 1..919 | 1..919 | 4900 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11331-PA | 913 | GJ11331-PA | 1..913 | 1..919 | 4334 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16700-PA | 921 | GK16700-PA | 1..921 | 1..919 | 4290 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19634-PA | 919 | GE19634-PA | 1..919 | 1..919 | 4846 | 98.3 | Plus |
Translation from 85 to 2844
> LD21723.hyp MTGETKLEKKPLKPAASEGDAKDPKAKKDEKKDGKDKEQQPELSDEDQQL QEELELLVQHLQEPDAKLYQPTLESMAKLIRASTTSMTSVPKPLKFMRPH YETMKTVYKHMPNEQARQLCADIISVLSMTMGSGKDCLAYRFLCDRKQRI GDWGHEYVRHLSGEISAHYHDTTGDFRVQLIELVKQIIPYNMEHNAEADA CDLLIEIDHLHLLSDFVDESAYPRVCLYLQSCYPYVPDPDNTIILETALQ LSRKFNQYTQAMRLALMLNDMDKIGEIFKEPKEPAMQKQLAFMLARQQIC LELDELVPDYDDLMEIMSNANLNKHFLNLARELDIMEPKTPEDIYKSHLD NSRSRFASIQVDSAKQNLAASFVNGFVNAGFGVDKLLSEDGNKWLYKNKE HGMLSATASLGLILLWDVDGGLTMIDKYLYSTDDNIKSGALLACGIVNCG IRNEVDPAHALLSDYIDNQNSCMRVGAILGLGIAYAGSNRSIVIDTLKTV FSFGSNNKSSASVEILGITALSLGLISVGSCNSEITEILLQTIMGLTKAD LKDTYTRFLFLGLGLLYLGRQKSTEAVMMTLEVLEEPYRSMATTMVDICA YAGTGNVLKIQQLLHICSDHYETSSADDEKEKSKKDKGKDKEKEKEKEKE KEREKDLSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAIRRA VPLALGLISASNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNA RLASMLRQLAQYHSKDPSNLFMVRIAQSLTHLGKGTLSLSPYHSDRQLMN PMAVAGLMATLVSLLDVKNLILNRSHYLLYTLVPAMQARMLITFDEELNQ LQVPVRVGIAIDVVGQAGKPKTITGFQTHTTPVLLAIGERAELATDEYLA LTPVMEGFVILKKNPNFVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpn1-PA | 919 | CG7762-PA | 1..919 | 1..919 | 4689 | 100 | Plus |
Rpn2-PC | 1020 | CG11888-PC | 333..620 | 325..616 | 187 | 25.2 | Plus |
Rpn2-PA | 1020 | CG11888-PA | 333..620 | 325..616 | 187 | 25.2 | Plus |
Rpn2-PB | 1029 | CG11888-PB | 333..620 | 325..616 | 187 | 25.2 | Plus |