BDGP Sequence Production Resources |
Search the DGRC for LD21729
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 217 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | Trxr-1-RA |
Protein status: | LD21729.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1985 |
Gene | Date | Evidence |
---|---|---|
CG2151 | 2002-12-11 | Blastp of sequenced clone |
CG2151 | 2003-01-01 | Sim4 clustering to Release 3 |
Trxr-1 | 2008-04-29 | Release 5.5 accounting |
Trxr-1 | 2008-08-15 | Release 5.9 accounting |
Trxr-1 | 2008-12-18 | 5.12 accounting |
1985 bp (1985 high quality bases) assembled on 2002-12-11
GenBank Submission: BT003266
> LD21729.complete CCGCTACAATACACGCTTAGCAGTTTTTACATTTCCGCTTCGACTACAAC AACATTCACTACCCGCCGTTGATCCTTGTTTTCTGTCTGATTTACGTGGA GCACCTACCAACAAGCAACAAAATAATGGCGCCCGTGCAAGGATCCTACG ACTACGACCTTATTGTGATTGGAGGCGGCTCAGCTGGCCTGGCCTGCGCC AAGGAGGCAGTCCTCAATGGAGCCCGTGTGGCCTGTCTGGATTTCGTTAA GCCCACGCCCACTCTGGGCACCAAGTGGGGCGTTGGCGGCACCTGCGTGA ACGTGGGCTGCATTCCCAAGAAGCTGATGCACCAGGCCTCCCTTCTGGGC GAGGCTGTCCATGAGGCGGCCGCCTACGGCTGGAACGTGGACGAAAAGAT CAAGCCAGACTGGCACAAGCTGGTGCAGTCCGTACAGAACCACATCAAGT CCGTCAACTGGGTGACCCGTGTGGATCTGCGCGACAAGAAAGTGGAGTAC ATCAATGGACTGGGCTCCTTCGTGGACTCGCACACACTGCTGGCCAAGCT GAAGAGCGGCGAGCGCACAATCACCGCCCAGACCTTCGTCATTGCCGTTG GCGGCCGACCACGTTATCCGGATATTCCCGGTGCTGTCGAGTATGGCATC ACCAGCGATGATCTGTTCAGTTTGGACCGCGAGCCCGGCAAGACCCTGGT GGTGGGAGCTGGCTACATTGGCTTGGAGTGCGCTGGATTCCTGAAGGGTC TCGGCTACGAGCCCACTGTGATGGTGCGTTCTATTGTGCTGCGTGGCTTC GACCAGCAGATGGCCGAGCTGGTGGCAGCCTCGATGGAGGAGCGTGGCAT TCCCTTCCTCCGCAAGACGGTGCCGCTGTCCGTGGAAAAGCAGGATGATG GCAAGCTGCTCGTGAAGTACAAGAACGTGGAGACCGGCGAGGAGGCCGAG GATGTTTACGACACCGTTCTGTGGGCCATCGGCCGCAAGGGTCTGGTGGA CGATCTGAACCTGCCCAATGCCGGCGTGACTGTGCAGAAGGACAAGATTC CAGTGGACTCCCAGGAGGCTACCAATGTGGCAAACATCTACGCTGTCGGC GATATCATCTATGGCAAGCCAGAGCTGACGCCCGTCGCCGTTTTGGCTGG CCGTTTGCTGGCCCGCCGCCTGTACGGAGGATCTACCCAGCGCATGGACT ACAAGGATGTGGCCACCACCGTTTTCACGCCCCTGGAGTACGCCTGCGTC GGCCTGAGCGAGGAGGATGCCGTCAAGCAGTTCGGAGCCGATGAGATCGA GGTGTTCCACGGCTACTACAAGCCCACGGAGTTCTTCATTCCCCAGAAGA GCGTGCGCTACTGCTACTTGAAGGCTGTGGCCGAGCGCCATGGTGACCAG CGCGTCTATGGACTGCACTATATTGGCCCGGTGGCCGGTGAGGTTATCCA GGGATTCGCTGCCGCTTTGAAGTCTGGCCTGACTATTAACACGCTGATCA ACACCGTGGGCATCCATCCCACTACCGCCGAAGAATTCACCCGGCTGGCC ATCACCAAGCGCTCCGGACTGGACCCCACGCCGGCCAGCTGCTGCAGCTA AAGCGGGAACGCAGCTCAGCCGCCTGGGACGTGTCGAAGCCGCTTGCTCC ACCCGAAATCCCGTAGATGAATGGTTGTTGTCGCGGCCCAGCGATCGATG AGTTCAATAGTTCCGTTTCGTTTCCACAATTAACACCCAACACAATAGCT CTGCGCAAGGGAGGGGCACTGGGCAGCGATGGCGGGTGGAACGACACCAG TGGAACTACCCGCGCGACCAGCCCAACCCACGACTGCTGCGCCGCCGACA TGCACTCAAAATTTTGAATTTGTTTGAACCTATGAAATTAACTATGAAAT CCCCTAAATGTACGGTTGAAGAATATAATTTTTCACCAACAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Trxr-1-RA | 2330 | Trxr-1-RA | 255..2197 | 1..1943 | 9715 | 100 | Plus |
Trxr-1.c | 2248 | Trxr-1.c | 408..2211 | 140..1943 | 9020 | 100 | Plus |
Trxr-1-RB | 2433 | Trxr-1-RB | 497..2300 | 140..1943 | 9020 | 100 | Plus |
Trxr-1.c | 2248 | Trxr-1.c | 69..209 | 1..141 | 705 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8138621..8139846 | 715..1940 | 6070 | 99.7 | Plus |
chrX | 22417052 | chrX | 8137905..8138259 | 140..494 | 1700 | 98.6 | Plus |
chrX | 22417052 | chrX | 8138323..8138549 | 488..714 | 1135 | 100 | Plus |
chr3L | 24539361 | chr3L | 22539772..22540775 | 594..1597 | 955 | 73 | Plus |
chr3L | 24539361 | chr3L | 22539318..22539672 | 146..500 | 715 | 81.3 | Plus |
chrX | 22417052 | chrX | 8134404..8134545 | 1..142 | 710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 8246808..8248036 | 715..1943 | 6145 | 100 | Plus |
X | 23542271 | X | 8246092..8246446 | 140..494 | 1760 | 99.7 | Plus |
X | 23542271 | X | 8246510..8246736 | 488..714 | 1135 | 100 | Plus |
3L | 28110227 | 3L | 22550864..22551867 | 594..1597 | 955 | 73 | Plus |
3L | 28110227 | 3L | 22550410..22550764 | 146..500 | 715 | 81.3 | Plus |
X | 23542271 | X | 8242591..8242732 | 1..142 | 710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 8254906..8256134 | 715..1943 | 6145 | 100 | Plus |
X | 23527363 | X | 8254190..8254544 | 140..494 | 1760 | 99.7 | Plus |
X | 23527363 | X | 8254608..8254834 | 488..714 | 1135 | 100 | Plus |
X | 23527363 | X | 8250689..8250830 | 1..142 | 710 | 100 | Plus |
3L | 28103327 | 3L | 22543964..22544229 | 594..859 | 490 | 78.9 | Plus |
3L | 28103327 | 3L | 22543626..22543755 | 265..394 | 455 | 90 | Plus |
3L | 28103327 | 3L | 22544779..22544967 | 1409..1597 | 330 | 78.3 | Plus |
3L | 28103327 | 3L | 22543768..22543864 | 404..500 | 320 | 88.6 | Plus |
3L | 28103327 | 3L | 22544666..22544754 | 1296..1384 | 310 | 89.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8138323..8138549 | 488..714 | 100 | -> | Plus |
chrX | 8134404..8134544 | 1..141 | 100 | -> | Plus |
chrX | 8137907..8138252 | 142..487 | 98 | -> | Plus |
chrX | 8138621..8139846 | 715..1940 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trxr-1-RA | 1..1476 | 126..1601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trxr-1-RA | 1..1476 | 126..1601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trxr-1-RA | 1..1476 | 126..1601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trxr-1-RA | 1..1476 | 126..1601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trxr-1-RA | 1..1476 | 126..1601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trxr-1-RA | 108..2047 | 1..1940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trxr-1-RA | 108..2047 | 1..1940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trxr-1-RA | 64..2003 | 1..1940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trxr-1-RA | 108..2047 | 1..1940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trxr-1-RA | 64..2003 | 1..1940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8246094..8246439 | 142..487 | 100 | -> | Plus |
X | 8242591..8242731 | 1..141 | 100 | -> | Plus |
X | 8246510..8246736 | 488..714 | 100 | -> | Plus |
X | 8246808..8248033 | 715..1940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8246094..8246439 | 142..487 | 100 | -> | Plus |
X | 8242591..8242731 | 1..141 | 100 | -> | Plus |
X | 8246510..8246736 | 488..714 | 100 | -> | Plus |
X | 8246808..8248033 | 715..1940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8246094..8246439 | 142..487 | 100 | -> | Plus |
X | 8242591..8242731 | 1..141 | 100 | -> | Plus |
X | 8246510..8246736 | 488..714 | 100 | -> | Plus |
X | 8246808..8248033 | 715..1940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8136624..8136764 | 1..141 | 100 | -> | Plus |
arm_X | 8140127..8140472 | 142..487 | 100 | -> | Plus |
arm_X | 8140543..8140769 | 488..714 | 100 | -> | Plus |
arm_X | 8140841..8142066 | 715..1940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8254608..8254834 | 488..714 | 100 | -> | Plus |
X | 8254192..8254537 | 142..487 | 100 | -> | Plus |
X | 8254906..8256131 | 715..1940 | 100 | Plus | |
X | 8250689..8250829 | 1..141 | 100 | -> | Plus |
Translation from 125 to 1600
> LD21729.pep MAPVQGSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTK WGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLV QSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTIT AQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGL ECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVP LSVEKQDDGKLLVKYKNVETGEEAEDVYDTVLWAIGRKGLVDDLNLPNAG VTVQKDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLY GGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKP TEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKS GLTINTLINTVGIHPTTAEEFTRLAITKRSGLDPTPASCCS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19373-PA | 537 | GF19373-PA | 52..537 | 6..491 | 2493 | 95.9 | Plus |
Dana\GF23459-PA | 514 | GF23459-PA | 22..514 | 1..491 | 2045 | 76.3 | Plus |
Dana\GF24574-PA | 504 | GF24574-PA | 35..489 | 7..471 | 397 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19308-PA | 491 | GG19308-PA | 1..491 | 1..491 | 2555 | 97.8 | Plus |
Dere\GG16263-PA | 518 | GG16263-PA | 31..518 | 8..491 | 2025 | 76.9 | Plus |
Dere\GG13635-PA | 504 | GG13635-PA | 35..489 | 7..471 | 379 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12753-PA | 596 | GH12753-PA | 110..596 | 4..491 | 2330 | 89.5 | Plus |
Dgri\GH16699-PA | 514 | GH16699-PA | 26..514 | 4..491 | 1960 | 75.9 | Plus |
Dgri\GH17093-PA | 504 | GH17093-PA | 35..489 | 7..471 | 388 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Trxr-1-PA | 491 | CG2151-PA | 1..491 | 1..491 | 2556 | 100 | Plus |
Trxr-1-PB | 596 | CG2151-PB | 106..596 | 1..491 | 2532 | 99.2 | Plus |
Trxr-1-PC | 508 | CG2151-PC | 23..508 | 6..491 | 2531 | 100 | Plus |
Trxr-2-PA | 516 | CG11401-PA | 24..516 | 1..491 | 1980 | 75.9 | Plus |
CG7430-PB | 504 | CG7430-PB | 35..487 | 7..469 | 389 | 28.1 | Plus |
CG7430-PA | 504 | CG7430-PA | 35..487 | 7..469 | 389 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15898-PA | 601 | GI15898-PA | 114..601 | 3..491 | 2322 | 88.8 | Plus |
Dmoj\GI11388-PA | 515 | GI11388-PA | 31..515 | 8..491 | 1948 | 76.3 | Plus |
Dmoj\GI11696-PA | 504 | GI11696-PA | 35..489 | 7..471 | 390 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23230-PA | 512 | GL23230-PA | 28..512 | 8..491 | 2021 | 77.2 | Plus |
Dper\GL22852-PA | 504 | GL22852-PA | 35..489 | 7..471 | 382 | 29.2 | Plus |
Dper\GL14458-PA | 65 | GL14458-PA | 1..64 | 1..65 | 174 | 58.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15270-PA | 490 | GA15270-PA | 1..490 | 1..491 | 2414 | 92.1 | Plus |
Dpse\GA10979-PA | 512 | GA10979-PA | 28..512 | 8..491 | 1995 | 77.2 | Plus |
Dpse\GA20345-PA | 504 | GA20345-PA | 35..489 | 7..471 | 382 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22453-PA | 516 | GM22453-PA | 31..516 | 8..491 | 2035 | 77.6 | Plus |
Dsec\GM11241-PA | 268 | GM11241-PA | 1..197 | 1..197 | 1040 | 99 | Plus |
Dsec\GM25722-PA | 504 | GM25722-PA | 35..489 | 7..471 | 375 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15034-PA | 516 | GD15034-PA | 55..516 | 32..491 | 1905 | 76.5 | Plus |
Dsim\GD24769-PA | 94 | GD24769-PA | 1..94 | 398..491 | 504 | 100 | Plus |
Dsim\GD14729-PA | 504 | GD14729-PA | 35..489 | 7..471 | 373 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16646-PA | 556 | GJ16646-PA | 67..556 | 1..491 | 2318 | 88.8 | Plus |
Dvir\GJ11643-PA | 517 | GJ11643-PA | 33..517 | 8..491 | 1960 | 77.2 | Plus |
Dvir\GJ11371-PA | 504 | GJ11371-PA | 35..489 | 7..471 | 383 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24920-PA | 550 | GK24920-PA | 65..550 | 5..491 | 2364 | 90.3 | Plus |
Dwil\GK16764-PA | 466 | GK16764-PA | 23..435 | 5..416 | 1667 | 75.1 | Plus |
Dwil\GK12667-PA | 504 | GK12667-PA | 35..489 | 7..471 | 386 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15773-PA | 491 | GE15773-PA | 1..491 | 1..491 | 2562 | 98 | Plus |
Dyak\GE23284-PA | 516 | GE23284-PA | 31..516 | 8..491 | 2017 | 77 | Plus |
Dyak\GE19931-PA | 504 | GE19931-PA | 35..489 | 7..471 | 381 | 28.4 | Plus |
Translation from 125 to 1600
> LD21729.hyp MAPVQGSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTK WGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLV QSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTIT AQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGL ECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVP LSVEKQDDGKLLVKYKNVETGEEAEDVYDTVLWAIGRKGLVDDLNLPNAG VTVQKDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLY GGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKP TEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKS GLTINTLINTVGIHPTTAEEFTRLAITKRSGLDPTPASCCS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Trxr-1-PA | 491 | CG2151-PA | 1..491 | 1..491 | 2556 | 100 | Plus |
Trxr-1-PB | 596 | CG2151-PB | 106..596 | 1..491 | 2532 | 99.2 | Plus |
Trxr-1-PC | 508 | CG2151-PC | 23..508 | 6..491 | 2531 | 100 | Plus |
Trxr-2-PA | 516 | CG11401-PA | 24..516 | 1..491 | 1980 | 75.9 | Plus |
CG7430-PB | 504 | CG7430-PB | 35..487 | 7..469 | 389 | 28.1 | Plus |