BDGP Sequence Production Resources |
Search the DGRC for LD21741
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 217 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5537-RA |
Protein status: | LD21741.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1114 |
Gene | Date | Evidence |
---|---|---|
CG5537 | 2001-01-01 | Release 2 assignment |
CG5537 | 2001-11-29 | Blastp of sequenced clone |
CG5537 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5537 | 2008-04-29 | Release 5.5 accounting |
CG5537 | 2008-08-15 | Release 5.9 accounting |
CG5537 | 2008-12-18 | 5.12 accounting |
1114 bp (1114 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069484
> LD21741.complete CAAGCCAAGCACGCGCTAGGAGGACAAAGTGCTACGTACAATTCTTTTAA TTTATTTATTTTATGTAGCCAGTGATAGCAACCAAATAGCCGAGTCATGC GCACCGGCTCGCCCAGCAGCAGCGGCTCCCAGTCGGAGGAGGGCAGCAGT TCCTCAGATCACCAGCAGCCGCAGCAGGAAGCCCAGGAGCAGGAGCAACA GCTGCACACTCCCACGCATGCACATGCCGCGGTGCCAGCTGCCACATCGG AGGAGATCCTGGCGGAGTACGGCAGCAACCTGAAGCTACTCGAGTGCAAT TCCCAGGTGGCCGAACTGCTGACCATATTGCGCGACAAGAACACCACGCG CAGTGACTTCAAGTTCTATGCCGACCGTCTCATCCGGCTGGTCATCGAGG AGTCGCTCAACCAACTGCCCTACACCCATTGCGATGTGGAGACGCCCACC GGTGCGATTTACGAGGGACTGAAGTATCGCTCCGGCAACTGCGGCGTGTC CATCATCCGATCGGGAGAGGCCATGGAGCAGGGACTGCGTGACTGCTGTC GCTCCATTCGCATTGGAAAGATCCTGGTCGAGTCCGATGCCAATACGCAT GAGGCCCGCGTGGTTTATGCCCGCTTTCCCGATGACATCGGCAGCAGGCA GGTGCTACTCATGTACCCCATCATGTCCACGGGCAACACTGTGCTGCAGG CGGTGAATGTGCTGCGGGAACACGGCGTACCCGAGAGCTGCATCATCCTG TCCAATCTCTTCTGCACACCCATTGCCGCTCGGACCGTAGTGAATGCCTT CCCCAAGCTGAAGATCCTCACCTCCGAGCTGCATCCCGTGGCACCTAATC ACTTTGGCCAGAAATACTTCGGTACAGACTAGATACTTGGGTCTATCTCG CAGACTTGACGACTAAGCGCTGCTTAGGATAGATTGCATTTGAGACACAC AGACAAATAGACGACCCCTGCGGCCAACCAAACTACTACTTAGCAACTGT TAGCTTTTCACAACTGGCTTTTAATGCAACTCTCAAATACGTTACGTTCG TTACGCACTATTGTAAATATAGAAACGAAATAAATATTTAAACATTAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5537-RA | 1136 | CG5537-RA | 39..1135 | 1..1097 | 5485 | 100 | Plus |
CG5537.a | 1075 | CG5537.a | 39..909 | 1..871 | 4355 | 100 | Plus |
CG5537.a | 1075 | CG5537.a | 909..1074 | 932..1097 | 830 | 100 | Plus |
mad2.a | 789 | mad2.a | 692..789 | 1097..1000 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 5803888..5804481 | 339..932 | 2955 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 5803485..5803823 | 1..339 | 1680 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 5804565..5804730 | 931..1096 | 830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 5803485..5803822 | 1..338 | 99 | -> | Plus |
chr3L | 5803888..5804481 | 339..932 | 99 | -> | Plus |
chr3L | 5804567..5804730 | 933..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5537-RA | 1..786 | 97..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5537-RA | 1..786 | 97..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5537-RA | 1..786 | 97..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5537-RA | 1..786 | 97..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5537-RA | 1..786 | 97..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5537-RA | 11..1106 | 1..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5537-RA | 11..1106 | 1..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5537-RA | 11..1106 | 1..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5537-RA | 11..1106 | 1..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5537-RA | 11..1106 | 1..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5810983..5811320 | 1..338 | 100 | -> | Plus |
3L | 5811386..5811979 | 339..932 | 100 | -> | Plus |
3L | 5812065..5812228 | 933..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5810983..5811320 | 1..338 | 100 | -> | Plus |
3L | 5811386..5811979 | 339..932 | 100 | -> | Plus |
3L | 5812065..5812228 | 933..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5810983..5811320 | 1..338 | 100 | -> | Plus |
3L | 5811386..5811979 | 339..932 | 100 | -> | Plus |
3L | 5812065..5812228 | 933..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 5804083..5804420 | 1..338 | 100 | -> | Plus |
arm_3L | 5804486..5805079 | 339..932 | 100 | -> | Plus |
arm_3L | 5805165..5805328 | 933..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5804083..5804420 | 1..338 | 100 | -> | Plus |
3L | 5804486..5805079 | 339..932 | 100 | -> | Plus |
3L | 5805165..5805328 | 933..1096 | 100 | Plus |
Translation from 96 to 881
> LD21741.pep MRTGSPSSSGSQSEEGSSSSDHQQPQQEAQEQEQQLHTPTHAHAAVPAAT SEEILAEYGSNLKLLECNSQVAELLTILRDKNTTRSDFKFYADRLIRLVI EESLNQLPYTHCDVETPTGAIYEGLKYRSGNCGVSIIRSGEAMEQGLRDC CRSIRIGKILVESDANTHEARVVYARFPDDIGSRQVLLMYPIMSTGNTVL QAVNVLREHGVPESCIILSNLFCTPIAARTVVNAFPKLKILTSELHPVAP NHFGQKYFGTD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23996-PA | 260 | GF23996-PA | 1..260 | 1..261 | 1176 | 88.6 | Plus |
Dana\GF13118-PA | 618 | GF13118-PA | 403..613 | 61..261 | 454 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15291-PA | 261 | GG15291-PA | 1..261 | 1..261 | 1372 | 98.1 | Plus |
Dere\GG20676-PA | 617 | GG20676-PA | 402..612 | 61..261 | 454 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14521-PA | 253 | GH14521-PA | 5..253 | 4..261 | 1140 | 84.5 | Plus |
Dgri\GH21395-PA | 618 | GH21395-PA | 403..613 | 61..261 | 453 | 44.5 | Plus |
Dgri\GH23520-PA | 219 | GH23520-PA | 4..214 | 61..261 | 450 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
kri-PC | 261 | CG5537-PC | 1..261 | 1..261 | 1346 | 100 | Plus |
kri-PA | 261 | CG5537-PA | 1..261 | 1..261 | 1346 | 100 | Plus |
kri-PB | 261 | CG5537-PB | 1..258 | 1..258 | 1329 | 100 | Plus |
l(2)k01209-PA | 561 | CG4798-PA | 346..556 | 61..261 | 433 | 44.5 | Plus |
l(2)k01209-PD | 626 | CG4798-PD | 411..621 | 61..261 | 433 | 44.5 | Plus |
l(2)k01209-PC | 626 | CG4798-PC | 411..621 | 61..261 | 433 | 44.5 | Plus |
l(2)k01209-PB | 626 | CG4798-PB | 411..621 | 61..261 | 433 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13298-PA | 235 | GI13298-PA | 1..235 | 1..261 | 921 | 71.9 | Plus |
Dmoj\GI18574-PA | 625 | GI18574-PA | 410..620 | 61..261 | 455 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21026-PA | 258 | GL21026-PA | 1..258 | 1..261 | 1169 | 88.1 | Plus |
Dper\GL11422-PA | 612 | GL11422-PA | 397..607 | 61..261 | 455 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18955-PA | 258 | GA18955-PA | 1..258 | 1..261 | 1169 | 88.1 | Plus |
Dpse\GA24721-PA | 610 | GA24721-PA | 395..605 | 61..261 | 455 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14723-PA | 261 | GM14723-PA | 1..261 | 1..261 | 1386 | 98.9 | Plus |
Dsec\GM21771-PA | 612 | GM21771-PA | 397..607 | 61..261 | 445 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11264-PA | 625 | GD11264-PA | 410..620 | 61..261 | 445 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12067-PA | 253 | GJ12067-PA | 5..253 | 4..261 | 1100 | 82.2 | Plus |
Dvir\GJ20368-PA | 624 | GJ20368-PA | 409..619 | 61..261 | 449 | 44.5 | Plus |
Translation from 96 to 881
> LD21741.hyp MRTGSPSSSGSQSEEGSSSSDHQQPQQEAQEQEQQLHTPTHAHAAVPAAT SEEILAEYGSNLKLLECNSQVAELLTILRDKNTTRSDFKFYADRLIRLVI EESLNQLPYTHCDVETPTGAIYEGLKYRSGNCGVSIIRSGEAMEQGLRDC CRSIRIGKILVESDANTHEARVVYARFPDDIGSRQVLLMYPIMSTGNTVL QAVNVLREHGVPESCIILSNLFCTPIAARTVVNAFPKLKILTSELHPVAP NHFGQKYFGTD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5537-PC | 261 | CG5537-PC | 1..261 | 1..261 | 1346 | 100 | Plus |
CG5537-PA | 261 | CG5537-PA | 1..261 | 1..261 | 1346 | 100 | Plus |
CG5537-PB | 261 | CG5537-PB | 1..258 | 1..258 | 1329 | 100 | Plus |
l(2)k01209-PA | 561 | CG4798-PA | 346..556 | 61..261 | 433 | 44.5 | Plus |
l(2)k01209-PD | 626 | CG4798-PD | 411..621 | 61..261 | 433 | 44.5 | Plus |