Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
LD21748.complete Sequence
2043 bp (2043 high quality bases) assembled on 2002-05-15
GenBank Submission: AY118913
> LD21748.complete
TAAAACTAGGAAAAACAGAAAATTTTATTTTCAATTGTTAAATATCCAAA
CGTAAACAGCCGGAAAATGTCACGACAAGCCTCTCGTTTGGACGCCAAGA
AAGTGTAAGTGTGTGTGTTGGGGGCTTGAGGTTGAGACACGGACACACAG
ACAGGCACAAGCCGACGTGCAATCAGGCAATGGAAAACCATTTCAGCGCC
ACCAGTCGCCCCTCAGCCACGCCCAGAATGTGCACCACCGCCTCTGCCGT
CGGTGCTGCCGCCAGCGCCGCCGCCGCCGCCGGCAACAACAATAACAACA
GCAATAGCAGCAGCAACAACAACGCAACAACCGGCAACAATTTAAGTGTT
AGCACTGCAGCCGGAGGAGCCACAAATGCCGCAGCAACGGCACAACCCAT
CCAAGTGATACCAATGCCCATGCTGCCCACCGGAGCGGCGCAAATCATAA
TTGGCCAGCAGCCACAGGGTCAGGCGACGGCGACGGGTCTGCAGCCACAA
TTGATACCGCTGCAGGCCAACCAGATTATGCTGCAGGCTGCGCAGCAGCA
GCCACAGATGCAGGTGATGCAGCTGCCCGATGGCCAGACTATATTCTATC
AGACGCCCACCATTGCCGCCTTGGATCCGAATGCAGCGGCCAACGCCGCA
GCTGCCATGGCAGCCCAGCCGACGCCGCACTACCTCAATATCAATGGGCA
GCTGGTGCAGATCAATCCAGCACCGAGCGCTAATCAGGCGGCACCCACAG
CTGGGCAACAGATTATAATGGTGCCGCAGACAGCGATGGCAGCGGTGAAT
GCAGCGGCCGCCAATGCCGGAGTAGGCGCCGGAGTGGGCACAGTGGTTAC
CCAACAACAACAGCAGCAGCATCAACAAGTACAATCCCAGACCCAAAACC
AGCAGCAGCAGCAACAGCAGCAGACGGTGGCGGCGGTGGCTGCCAGTGCT
GCAGTCAATAATATAAGCGCCGATGTCAGCACAAGTACAACTGGAACGAA
TACGAACAGCGAGGACGAGAGCTCCAAGGGCGAGGCGGACGAGGAGCCGC
TCTATGTGAATGCCAAGCAGTACAAACGTATTCTCATTCGGCGGCAGGCC
AGGGCCAAGCTAGAGTCGCGCATACCCAAGGAACGGTGCAAGTATCTGCA
CGAATCTCGTCATCGCCACGCCATGAATCGGGCTCGTGGCGAGGGTGGTC
GCTTCCATTCGGCACAGGAGAAGGGCGACCAAGATTCGTCCGGCCCGGAA
GGCGGCAGCATGCCAATGGCGTCCAGTGGCGGCGTCACCCTCAGCCGTGG
CACGGCACGTGCTCCGCCCAAACTGATCGCGCCACATCAAACGCCCAGCA
TTACCATAACGGCGATCAAATCGGAATAGTCGCCTCCTAGCTGTAGGATA
CAAACTAGATAAGATTGTAGTCATAGCGTTTAGTCCTAAGCCAGTCGCTC
TGTGTCCATTTGTCCTCAATCACACCACTTTAGTCGGCTCACATAGTTTT
CATTTTTTTTTTTTTTTCAAAATTAAGTCTTCATATATTATTTTCAAAGG
GAATTTTTGGGTTTTTCTATTTATTTTCATTCACTTAGATTGGAAAAGTG
ATAAGTTCAAGAAAGAGATAATTGTTTTACTTATTATATTCATTTTCTAA
ATCGTTTCTAATTTCTAATATTTATTTTCTGTTAGCCAGCTGTTAAAAAT
TGTTTGTAATTATTAAATAGAGAATTTATTTCATTTACTAGACATTTTCA
AAATTTACACAAGTAATGCAATTATTAATTTAGGGTTTATAGTTCATTTC
AAAATGGAATGGGGAAAGGGCTGCCAATAGTCACCGCAAAACAACAGAGC
TCAACAATATAAGATTCAACAAGGGTGAATGATATAGTCGCCTTCCCCGA
CTATCAGATACCCGTTACTCAGCTTTTGGAAATGCGAACTCGAAATTTCA
AAAGTTCATAAATTTCAAACAAATTTTTTGGCAAATCGATAGAAGACTAA
TAAAATTATGAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAA
LD21748.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:08:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nf-YA-RA | 2041 | Nf-YA-RA | 26..2041 | 1..2017 | 10045 | 99.9 | Plus |
| Bet3-RA | 688 | Bet3-RA | 38..142 | 1..105 | 525 | 100 | Plus |
| Bet3.a | 984 | Bet3.a | 37..141 | 1..105 | 525 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:52:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3L | 24539361 | chr3L | 9431931..9433837 | 2017..105 | 9260 | 99.1 | Minus |
| chr3L | 24539361 | chr3L | 9433994..9434098 | 105..1 | 525 | 100 | Minus |
| chr4 | 1351717 | chr4 | 441812..441892 | 1868..1948 | 270 | 88.9 | Plus |
| chrX | 22417052 | chrX | 21992370..21992443 | 1877..1950 | 265 | 90.5 | Plus |
| chr3R | 27901430 | chr3R | 8037935..8038008 | 1950..1877 | 265 | 90.5 | Minus |
| chr2R | 21145070 | chr2R | 1776506..1776582 | 1877..1953 | 265 | 89.6 | Plus |
| chr2R | 21145070 | chr2R | 1917430..1917509 | 1868..1947 | 265 | 88.8 | Plus |
| chrU | 10048995 | chrU | 6584136..6584217 | 1868..1949 | 260 | 87.8 | Plus |
| chr2L | 23010047 | chr2L | 22771261..22771342 | 1949..1868 | 260 | 87.8 | Minus |
| chr2L | 23010047 | chr2L | 22778379..22778460 | 1949..1868 | 260 | 87.8 | Minus |
| chr4 | 1351717 | chr4 | 185897..185983 | 1864..1950 | 255 | 86.2 | Plus |
| chr4 | 1351717 | chr4 | 402399..402473 | 1950..1876 | 255 | 89.3 | Minus |
| chr3R | 27901430 | chr3R | 27790916..27790987 | 1877..1948 | 255 | 90.3 | Plus |
| chr4 | 1351717 | chr4 | 688544..688617 | 1877..1950 | 250 | 89.2 | Plus |
| chr4 | 1351717 | chr4 | 970306..970379 | 1877..1950 | 250 | 89.2 | Plus |
| chrX | 22417052 | chrX | 22380282..22380358 | 1953..1877 | 250 | 88.3 | Minus |
| chr2L | 23010047 | chr2L | 21620728..21620810 | 1868..1950 | 250 | 86.7 | Plus |
| chr2L | 23010047 | chr2L | 21784083..21784168 | 1862..1947 | 250 | 86 | Plus |
| chrXHet | 204175 | chrXHet | 3244..3320 | 1944..1868 | 250 | 88.3 | Minus |
| chrXHet | 204175 | chrXHet | 41335..41417 | 1868..1950 | 250 | 86.7 | Plus |
| chr3LHet | 2555433 | chr3LHet | 1146148..1146230 | 1868..1950 | 250 | 86.7 | Plus |
| chr2L | 23010047 | chr2L | 22722513..22722585 | 1877..1949 | 245 | 89 | Plus |
| chr2L | 23010047 | chr2L | 22746143..22746215 | 1949..1877 | 245 | 89 | Minus |
| chr3L | 24539361 | chr3L | 91003..91074 | 1877..1948 | 240 | 88.9 | Plus |
| chr4 | 1351717 | chr4 | 863423..863506 | 1950..1867 | 240 | 85.7 | Minus |
| chr2L | 23010047 | chr2L | 22644535..22644624 | 1957..1868 | 240 | 84.4 | Minus |
| chr3RHet | 2517486 | chr3RHet | 1187002..1187082 | 1950..1870 | 240 | 86.4 | Minus |
| chr3L | 24539361 | chr3L | 22501126..22501208 | 1950..1868 | 235 | 85.5 | Minus |
| chr4 | 1351717 | chr4 | 121200..121273 | 1950..1877 | 235 | 87.8 | Minus |
| chr4 | 1351717 | chr4 | 256429..256511 | 1950..1868 | 235 | 85.5 | Minus |
| chr4 | 1351717 | chr4 | 1251660..1251733 | 1950..1877 | 235 | 87.8 | Minus |
| chrX | 22417052 | chrX | 21430312..21430382 | 1878..1948 | 235 | 88.7 | Plus |
| chrX | 22417052 | chrX | 21502933..21503015 | 1950..1868 | 235 | 85.5 | Minus |
| chrX | 22417052 | chrX | 21906888..21906967 | 1869..1948 | 235 | 86.2 | Plus |
| chrX | 22417052 | chrX | 21998396..21998469 | 1950..1877 | 235 | 87.8 | Minus |
| chrX | 22417052 | chrX | 22109663..22109736 | 1950..1877 | 235 | 87.8 | Minus |
| chr3R | 27901430 | chr3R | 228225..228298 | 1950..1877 | 235 | 87.8 | Minus |
| chr3R | 27901430 | chr3R | 27828089..27828156 | 1883..1950 | 235 | 89.7 | Plus |
| chr2R | 21145070 | chr2R | 21019004..21019092 | 1957..1869 | 235 | 84.3 | Minus |
| chrU | 10048995 | chrU | 30416..30489 | 1950..1877 | 235 | 87.8 | Minus |
| chr2L | 23010047 | chr2L | 21940805..21940887 | 1950..1868 | 235 | 85.5 | Minus |
| chrXHet | 204175 | chrXHet | 32434..32516 | 1868..1950 | 235 | 85.5 | Plus |
| chr3L | 24539361 | chr3L | 22749805..22749862 | 1893..1950 | 230 | 93.1 | Plus |
| chr2R | 21145070 | chr2R | 3812829..3812910 | 1868..1949 | 230 | 85.4 | Plus |
| chr2R | 21145070 | chr2R | 21103774..21103846 | 1950..1878 | 230 | 87.7 | Minus |
| chr2L | 23010047 | chr2L | 21724596..21724668 | 1877..1949 | 230 | 87.7 | Plus |
| chr3RHet | 2517486 | chr3RHet | 1598209..1598281 | 1877..1949 | 230 | 87.7 | Plus |
| chr3L | 24539361 | chr3L | 19673565..19673639 | 1870..1944 | 225 | 86.7 | Plus |
| chr3L | 24539361 | chr3L | 39163..39243 | 1948..1868 | 225 | 85.2 | Minus |
| chr4 | 1351717 | chr4 | 274804..274884 | 1948..1868 | 225 | 85.2 | Minus |
| chrX | 22417052 | chrX | 3688269..3688340 | 1948..1877 | 225 | 87.5 | Minus |
| chrX | 22417052 | chrX | 3697362..3697433 | 1948..1877 | 225 | 87.5 | Minus |
| chrX | 22417052 | chrX | 4021718..4021798 | 1948..1868 | 225 | 85.2 | Minus |
| chrX | 22417052 | chrX | 22362054..22362125 | 1877..1948 | 225 | 87.5 | Plus |
| chr3R | 27901430 | chr3R | 329865..329936 | 1879..1950 | 225 | 87.5 | Plus |
| chr3R | 27901430 | chr3R | 657275..657358 | 1950..1867 | 225 | 84.5 | Minus |
| chr3L | 24539361 | chr3L | 18732726..18732799 | 1950..1877 | 220 | 86.5 | Minus |
| chr3L | 24539361 | chr3L | 24063986..24064065 | 1947..1868 | 220 | 85 | Minus |
| chr3L | 24539361 | chr3L | 24079826..24079902 | 1953..1877 | 220 | 85.7 | Minus |
| chr3L | 24539361 | chr3L | 24134190..24134266 | 1953..1877 | 220 | 85.7 | Minus |
| chr4 | 1351717 | chr4 | 399605..399687 | 1868..1950 | 220 | 84.3 | Plus |
| chr4 | 1351717 | chr4 | 402194..402246 | 1898..1950 | 220 | 94.3 | Plus |
| chr4 | 1351717 | chr4 | 960510..960577 | 1950..1883 | 220 | 88.2 | Minus |
| chrX | 22417052 | chrX | 90825..90907 | 1950..1868 | 220 | 84.3 | Minus |
| chrX | 22417052 | chrX | 6773405..6773487 | 1950..1868 | 220 | 84.3 | Minus |
| chrX | 22417052 | chrX | 18246224..18246306 | 1950..1868 | 220 | 84.3 | Minus |
| chrX | 22417052 | chrX | 19080632..19080714 | 1867..1949 | 220 | 84.3 | Plus |
| chrX | 22417052 | chrX | 21012526..21012608 | 1950..1868 | 220 | 84.3 | Minus |
| chrX | 22417052 | chrX | 21023745..21023827 | 1950..1868 | 220 | 84.3 | Minus |
| chrX | 22417052 | chrX | 21253233..21253306 | 1877..1950 | 220 | 86.5 | Plus |
| chrX | 22417052 | chrX | 21988130..21988212 | 1868..1950 | 220 | 84.3 | Plus |
| chrX | 22417052 | chrX | 22161094..22161164 | 1948..1878 | 220 | 87.3 | Minus |
| chrX | 22417052 | chrX | 22292296..22292381 | 1866..1951 | 220 | 83.7 | Plus |
| chrX | 22417052 | chrX | 22364880..22364962 | 1868..1950 | 220 | 84.3 | Plus |
| chrX | 22417052 | chrX | 22382953..22383017 | 1956..1892 | 220 | 89.2 | Minus |
| chr3R | 27901430 | chr3R | 562235..562317 | 1950..1868 | 220 | 84.3 | Minus |
| chr3R | 27901430 | chr3R | 12480400..12480473 | 1950..1877 | 220 | 86.5 | Minus |
| chr2R | 21145070 | chr2R | 583549..583631 | 1868..1950 | 220 | 84.3 | Plus |
| chr2R | 21145070 | chr2R | 707592..707665 | 1877..1950 | 220 | 86.5 | Plus |
| chr2R | 21145070 | chr2R | 21096834..21096907 | 1877..1950 | 220 | 86.5 | Plus |
| chrU | 10048995 | chrU | 4052846..4052928 | 1868..1950 | 220 | 84.3 | Plus |
| chrU | 10048995 | chrU | 5570460..5570542 | 1950..1868 | 220 | 84.3 | Minus |
| chrU | 10048995 | chrU | 6467814..6467896 | 1950..1868 | 220 | 84.3 | Minus |
| chr2L | 23010047 | chr2L | 116934..117016 | 1950..1868 | 220 | 84.3 | Minus |
| chr2L | 23010047 | chr2L | 3462299..3462381 | 1868..1950 | 220 | 84.3 | Plus |
| chr2L | 23010047 | chr2L | 7232160..7232239 | 1947..1868 | 220 | 85 | Minus |
| chr2L | 23010047 | chr2L | 21300535..21300617 | 1868..1950 | 220 | 84.3 | Plus |
| chr2L | 23010047 | chr2L | 21555823..21555896 | 1877..1950 | 220 | 86.5 | Plus |
| chr3LHet | 2555433 | chr3LHet | 729584..729666 | 1868..1950 | 220 | 84.3 | Plus |
| chr3LHet | 2555433 | chr3LHet | 2003783..2003856 | 1877..1950 | 220 | 86.5 | Plus |
| chr3LHet | 2555433 | chr3LHet | 2158117..2158199 | 1868..1950 | 220 | 84.3 | Plus |
| chr3RHet | 2517486 | chr3RHet | 611928..612010 | 1950..1868 | 220 | 84.3 | Minus |
| chr3RHet | 2517486 | chr3RHet | 2512328..2512410 | 1948..1866 | 220 | 84.3 | Minus |
| chr3L | 24539361 | chr3L | 19414513..19414591 | 1946..1868 | 215 | 84.8 | Minus |
| chr3L | 24539361 | chr3L | 22995692..22995770 | 1948..1870 | 215 | 84.8 | Minus |
| chr3L | 24539361 | chr3L | 24062780..24062861 | 1949..1868 | 215 | 84.1 | Minus |
| chrX | 22417052 | chrX | 21352143..21352215 | 1877..1950 | 215 | 89.2 | Plus |
| chr3R | 27901430 | chr3R | 27779922..27780000 | 1946..1868 | 215 | 84.8 | Minus |
| chr2R | 21145070 | chr2R | 804188..804254 | 1884..1950 | 215 | 88.1 | Plus |
| chr2R | 21145070 | chr2R | 1134532..1134610 | 1957..1879 | 215 | 84.8 | Minus |
| chr2R | 21145070 | chr2R | 1682248..1682305 | 1950..1893 | 215 | 91.4 | Minus |
| chr2R | 21145070 | chr2R | 16248351..16248426 | 1943..1868 | 215 | 85.5 | Minus |
| chr2L | 23010047 | chr2L | 17972658..17972736 | 1946..1868 | 215 | 84.8 | Minus |
| chr2L | 23010047 | chr2L | 21381858..21381915 | 1893..1950 | 215 | 91.4 | Plus |
| chr3L | 24539361 | chr3L | 38774..38845 | 1948..1877 | 210 | 86.1 | Minus |
| chr3L | 24539361 | chr3L | 22536872..22536952 | 1868..1948 | 210 | 84 | Plus |
| chr3L | 24539361 | chr3L | 22905148..22905219 | 1948..1877 | 210 | 86.1 | Minus |
| chr3L | 24539361 | chr3L | 24154656..24154730 | 1953..1879 | 210 | 85.3 | Minus |
| chr4 | 1351717 | chr4 | 254330..254410 | 1948..1868 | 210 | 84 | Minus |
| chr4 | 1351717 | chr4 | 625166..625237 | 1877..1948 | 210 | 86.1 | Plus |
| chr4 | 1351717 | chr4 | 637258..637329 | 1948..1877 | 210 | 86.1 | Minus |
| chrX | 22417052 | chrX | 22245303..22245374 | 1877..1948 | 210 | 86.1 | Plus |
| chr2R | 21145070 | chr2R | 1680896..1680952 | 1868..1924 | 210 | 91.2 | Plus |
| chr2L | 23010047 | chr2L | 22336699..22336764 | 1885..1950 | 210 | 87.9 | Plus |
| chr3L | 24539361 | chr3L | 22927330..22927403 | 1877..1950 | 205 | 85.1 | Plus |
| chr3L | 24539361 | chr3L | 23012167..23012249 | 1950..1868 | 205 | 83.1 | Minus |
| chr3L | 24539361 | chr3L | 23758621..23758703 | 1868..1950 | 205 | 83.1 | Plus |
| chr3L | 24539361 | chr3L | 23761312..23761382 | 1878..1948 | 205 | 85.9 | Plus |
| chr3L | 24539361 | chr3L | 24389603..24389673 | 1953..1883 | 205 | 85.9 | Minus |
| chr4 | 1351717 | chr4 | 75424..75497 | 1865..1938 | 205 | 85.1 | Plus |
| chr4 | 1351717 | chr4 | 205588..205670 | 1868..1950 | 205 | 83.1 | Plus |
| chr4 | 1351717 | chr4 | 352921..353000 | 1868..1947 | 205 | 83.8 | Plus |
| chr4 | 1351717 | chr4 | 534944..535026 | 1950..1868 | 205 | 83.1 | Minus |
| chr4 | 1351717 | chr4 | 1025531..1025598 | 1883..1950 | 205 | 86.8 | Plus |
| chrX | 22417052 | chrX | 32089..32171 | 1950..1868 | 205 | 83.1 | Minus |
| chrX | 22417052 | chrX | 14015164..14015246 | 1950..1868 | 205 | 83.1 | Minus |
| chrX | 22417052 | chrX | 15823933..15824012 | 1947..1868 | 205 | 83.8 | Minus |
| chrX | 22417052 | chrX | 17443850..17443932 | 1868..1950 | 205 | 83.1 | Plus |
| chrX | 22417052 | chrX | 20246894..20246976 | 1868..1950 | 205 | 83.1 | Plus |
| chrX | 22417052 | chrX | 21286932..21287005 | 1950..1877 | 205 | 85.1 | Minus |
| chrX | 22417052 | chrX | 21469187..21469269 | 1868..1950 | 205 | 83.1 | Plus |
| chrX | 22417052 | chrX | 22140042..22140124 | 1868..1950 | 205 | 83.1 | Plus |
| chrX | 22417052 | chrX | 22181305..22181378 | 1950..1877 | 205 | 85.1 | Minus |
| chr3R | 27901430 | chr3R | 2107..2174 | 1950..1883 | 205 | 86.8 | Minus |
| chr3R | 27901430 | chr3R | 8726..8781 | 1893..1948 | 205 | 91.1 | Plus |
| chr3R | 27901430 | chr3R | 94228..94310 | 1868..1950 | 205 | 83.1 | Plus |
| chr2R | 21145070 | chr2R | 18122..18183 | 1892..1953 | 205 | 88.7 | Plus |
| chr2R | 21145070 | chr2R | 266818..266900 | 1868..1950 | 205 | 83.1 | Plus |
| chr2R | 21145070 | chr2R | 1011853..1011920 | 1950..1883 | 205 | 86.8 | Minus |
| chr2R | 21145070 | chr2R | 1254755..1254828 | 1877..1950 | 205 | 85.1 | Plus |
| chr2R | 21145070 | chr2R | 1497813..1497880 | 1883..1950 | 205 | 86.8 | Plus |
| chr2R | 21145070 | chr2R | 2050087..2050169 | 1950..1868 | 205 | 83.1 | Minus |
| chrU | 10048995 | chrU | 275725..275804 | 1947..1868 | 205 | 83.8 | Minus |
| chrU | 10048995 | chrU | 377178..377260 | 1868..1950 | 205 | 83.1 | Plus |
| chrU | 10048995 | chrU | 1355391..1355455 | 1950..1886 | 205 | 87.7 | Minus |
| chr2L | 23010047 | chr2L | 17456937..17457019 | 1950..1868 | 205 | 83.1 | Minus |
| chr2L | 23010047 | chr2L | 21707237..21707310 | 1950..1877 | 205 | 85.1 | Minus |
| chr2L | 23010047 | chr2L | 21760475..21760548 | 1950..1877 | 205 | 85.1 | Minus |
| chr2L | 23010047 | chr2L | 21774021..21774103 | 1868..1950 | 205 | 83.1 | Plus |
| chr2L | 23010047 | chr2L | 21796315..21796394 | 1948..1869 | 205 | 83.8 | Minus |
| chr3LHet | 2555433 | chr3LHet | 210389..210459 | 1883..1953 | 205 | 85.9 | Plus |
| chr3LHet | 2555433 | chr3LHet | 599380..599462 | 1950..1868 | 205 | 83.1 | Minus |
| chr3LHet | 2555433 | chr3LHet | 853478..853560 | 1950..1868 | 205 | 83.1 | Minus |
| chr3LHet | 2555433 | chr3LHet | 914069..914142 | 1877..1950 | 205 | 85.1 | Plus |
| chr3RHet | 2517486 | chr3RHet | 2020530..2020612 | 1950..1868 | 205 | 83.1 | Minus |
| chr3L | 24539361 | chr3L | 22843126..22843192 | 1884..1950 | 200 | 86.6 | Plus |
| chr3L | 24539361 | chr3L | 23011466..23011547 | 1869..1950 | 200 | 82.9 | Plus |
| chr4 | 1351717 | chr4 | 958513..958579 | 1950..1884 | 200 | 86.6 | Minus |
| chrX | 22417052 | chrX | 10831174..10831240 | 1934..1868 | 200 | 86.6 | Minus |
| chrX | 22417052 | chrX | 16727647..16727695 | 1876..1924 | 200 | 93.9 | Plus |
| chrX | 22417052 | chrX | 19698605..19698686 | 1868..1949 | 200 | 82.9 | Plus |
| chrX | 22417052 | chrX | 19703171..19703225 | 1868..1922 | 200 | 90.9 | Plus |
| chrX | 22417052 | chrX | 22191035..22191092 | 1924..1867 | 200 | 89.7 | Minus |
| chr3R | 27901430 | chr3R | 132873..132930 | 1950..1893 | 200 | 89.7 | Minus |
| chr3R | 27901430 | chr3R | 239716..239770 | 1868..1922 | 200 | 90.9 | Plus |
| chr3R | 27901430 | chr3R | 422457..422514 | 1950..1893 | 200 | 89.7 | Minus |
| chr2R | 21145070 | chr2R | 264825..264885 | 1943..1883 | 200 | 88.5 | Minus |
| chr2R | 21145070 | chr2R | 593256..593325 | 1879..1948 | 200 | 85.7 | Plus |
| chr2R | 21145070 | chr2R | 1312130..1312205 | 1961..1886 | 200 | 84.2 | Minus |
| chr2R | 21145070 | chr2R | 21081916..21081970 | 1896..1950 | 200 | 90.9 | Plus |
| chr2L | 23010047 | chr2L | 4030096..4030165 | 1946..1877 | 200 | 85.7 | Minus |
| chr2L | 23010047 | chr2L | 22310079..22310160 | 1948..1867 | 200 | 82.9 | Minus |
| chr2L | 23010047 | chr2L | 22316811..22316871 | 1878..1938 | 200 | 88.5 | Plus |
| chr3L | 24539361 | chr3L | 20490539..20490625 | 1864..1950 | 195 | 81.6 | Plus |
| chr3L | 24539361 | chr3L | 23623991..23624071 | 1868..1948 | 195 | 82.7 | Plus |
| chr3L | 24539361 | chr3L | 23637552..23637605 | 1921..1868 | 195 | 90.7 | Minus |
| chr3L | 24539361 | chr3L | 23760608..23760664 | 1868..1924 | 195 | 89.5 | Plus |
| chr4 | 1351717 | chr4 | 532394..532486 | 1948..1856 | 195 | 80.6 | Minus |
| chr4 | 1351717 | chr4 | 1001175..1001231 | 1924..1868 | 195 | 89.5 | Minus |
| chrX | 22417052 | chrX | 169271..169342 | 1939..1868 | 195 | 84.7 | Minus |
| chrX | 22417052 | chrX | 182447..182494 | 1924..1877 | 195 | 93.8 | Minus |
| chrX | 22417052 | chrX | 6649738..6649794 | 1894..1950 | 195 | 89.5 | Plus |
| chrX | 22417052 | chrX | 11797006..11797086 | 1868..1948 | 195 | 82.7 | Plus |
| chrX | 22417052 | chrX | 20393642..20393689 | 1939..1892 | 195 | 93.8 | Minus |
| chrX | 22417052 | chrX | 20998226..20998282 | 1924..1868 | 195 | 89.5 | Minus |
| chrX | 22417052 | chrX | 22025429..22025500 | 1948..1877 | 195 | 84.7 | Minus |
| chr2R | 21145070 | chr2R | 1003560..1003613 | 1897..1950 | 195 | 90.7 | Plus |
| chr2R | 21145070 | chr2R | 1100523..1100570 | 1877..1924 | 195 | 93.8 | Plus |
| chr2R | 21145070 | chr2R | 1415410..1415466 | 1868..1924 | 195 | 89.5 | Plus |
| chrU | 10048995 | chrU | 1859145..1859225 | 1948..1868 | 195 | 82.7 | Minus |
| chrU | 10048995 | chrU | 1863950..1864033 | 1950..1867 | 195 | 82.1 | Minus |
| chr2L | 23010047 | chr2L | 21619191..21619271 | 1868..1948 | 195 | 82.7 | Plus |
| chr2L | 23010047 | chr2L | 21921923..21922000 | 1946..1869 | 195 | 83.3 | Minus |
| chr2L | 23010047 | chr2L | 22065993..22066064 | 1877..1948 | 195 | 84.7 | Plus |
| chr2L | 23010047 | chr2L | 22069058..22069126 | 1877..1945 | 195 | 85.5 | Plus |
| chr2L | 23010047 | chr2L | 22162255..22162338 | 1951..1868 | 195 | 82.1 | Minus |
| chr2L | 23010047 | chr2L | 22457732..22457803 | 1948..1877 | 195 | 84.7 | Minus |
| chr2L | 23010047 | chr2L | 22637201..22637272 | 1877..1948 | 195 | 84.7 | Plus |
| chr2L | 23010047 | chr2L | 22650602..22650673 | 1948..1877 | 195 | 84.7 | Minus |
| chr2L | 23010047 | chr2L | 22919978..22920040 | 1869..1931 | 195 | 87.3 | Plus |
| chr3LHet | 2555433 | chr3LHet | 741203..741259 | 1924..1868 | 195 | 89.5 | Minus |
| chr3RHet | 2517486 | chr3RHet | 1506610..1506681 | 1868..1939 | 195 | 84.7 | Plus |
| chr3L | 24539361 | chr3L | 18732555..18732598 | 2017..1974 | 190 | 95.5 | Minus |
| chr3L | 24539361 | chr3L | 19478339..19478421 | 1950..1868 | 190 | 81.9 | Minus |
| chr3L | 24539361 | chr3L | 23017909..23017988 | 1948..1869 | 190 | 82.5 | Minus |
| chr3L | 24539361 | chr3L | 23038167..23038231 | 1886..1950 | 190 | 86.2 | Plus |
| chr3L | 24539361 | chr3L | 23214767..23214819 | 1898..1950 | 190 | 90.6 | Plus |
| chr3L | 24539361 | chr3L | 23709700..23709782 | 1950..1868 | 190 | 81.9 | Minus |
| chr3L | 24539361 | chr3L | 23861010..23861083 | 1877..1950 | 190 | 83.8 | Plus |
| chr3L | 24539361 | chr3L | 24231291..24231373 | 1868..1950 | 190 | 81.9 | Plus |
| chr4 | 1351717 | chr4 | 471649..471710 | 1938..1877 | 190 | 87.1 | Minus |
| chr4 | 1351717 | chr4 | 556465..556541 | 1869..1945 | 190 | 83.1 | Plus |
| chr4 | 1351717 | chr4 | 965370..965440 | 1877..1947 | 190 | 84.5 | Plus |
| chrX | 22417052 | chrX | 599493..599548 | 1950..1895 | 190 | 89.3 | Minus |
| chrX | 22417052 | chrX | 605014..605069 | 1950..1895 | 190 | 89.3 | Minus |
| chrX | 22417052 | chrX | 14705821..14705879 | 1867..1925 | 190 | 88.1 | Plus |
| chrX | 22417052 | chrX | 17511608..17511660 | 1950..1898 | 190 | 90.6 | Minus |
| chr3R | 27901430 | chr3R | 12354..12424 | 1948..1878 | 190 | 84.5 | Minus |
| chr3R | 27901430 | chr3R | 506186..506241 | 1869..1924 | 190 | 89.3 | Plus |
| chr3R | 27901430 | chr3R | 27859839..27859921 | 1950..1868 | 190 | 81.9 | Minus |
| chr3R | 27901430 | chr3R | 27886437..27886516 | 1868..1947 | 190 | 82.5 | Plus |
| chr2R | 21145070 | chr2R | 2835857..2835921 | 1886..1950 | 190 | 86.2 | Plus |
| chr2R | 21145070 | chr2R | 78566..78636 | 1954..1884 | 190 | 84.5 | Minus |
| chr2R | 21145070 | chr2R | 231127..231209 | 1868..1950 | 190 | 81.9 | Plus |
| chr2R | 21145070 | chr2R | 485149..485216 | 1950..1883 | 190 | 85.3 | Minus |
| chr2R | 21145070 | chr2R | 639512..639579 | 1883..1950 | 190 | 85.3 | Plus |
| chr2R | 21145070 | chr2R | 710417..710463 | 1901..1947 | 190 | 93.6 | Plus |
| chr2R | 21145070 | chr2R | 1203114..1203199 | 1868..1953 | 190 | 81.4 | Plus |
| chr2R | 21145070 | chr2R | 1553297..1553352 | 1948..1893 | 190 | 89.3 | Minus |
| chr2R | 21145070 | chr2R | 2085732..2085796 | 1950..1886 | 190 | 86.2 | Minus |
| chrU | 10048995 | chrU | 31099..31181 | 1868..1950 | 190 | 81.9 | Plus |
| chrU | 10048995 | chrU | 249461..249531 | 1938..1868 | 190 | 84.5 | Minus |
| chrU | 10048995 | chrU | 1355471..1355535 | 1950..1886 | 190 | 86.2 | Minus |
| chrU | 10048995 | chrU | 3401825..3401898 | 1950..1877 | 190 | 83.8 | Minus |
| chr2L | 23010047 | chr2L | 18158299..18158363 | 1950..1886 | 190 | 86.2 | Minus |
| chr2L | 23010047 | chr2L | 21263734..21263816 | 1950..1868 | 190 | 81.9 | Minus |
| chr2L | 23010047 | chr2L | 21337211..21337266 | 1893..1948 | 190 | 89.3 | Plus |
| chr2L | 23010047 | chr2L | 21345476..21345537 | 1945..1884 | 190 | 87.1 | Minus |
| chr2L | 23010047 | chr2L | 21617891..21617973 | 1950..1868 | 190 | 81.9 | Minus |
| chr2L | 23010047 | chr2L | 21855383..21855456 | 1877..1950 | 190 | 83.8 | Plus |
| chr2L | 23010047 | chr2L | 22122879..22122946 | 1883..1950 | 190 | 85.3 | Plus |
| chr2L | 23010047 | chr2L | 22177595..22177677 | 1950..1868 | 190 | 81.9 | Minus |
| chr2L | 23010047 | chr2L | 22368463..22368518 | 1938..1883 | 190 | 89.3 | Minus |
| chr2L | 23010047 | chr2L | 22522725..22522798 | 1877..1950 | 190 | 83.8 | Plus |
| chr2L | 23010047 | chr2L | 22607900..22607967 | 1883..1950 | 190 | 85.3 | Plus |
| chr2L | 23010047 | chr2L | 22884484..22884557 | 1877..1950 | 190 | 83.8 | Plus |
| chrXHet | 204175 | chrXHet | 7919..7992 | 1877..1950 | 190 | 83.8 | Plus |
| chr3LHet | 2555433 | chr3LHet | 209008..209075 | 1950..1883 | 190 | 85.3 | Minus |
| chr3LHet | 2555433 | chr3LHet | 482163..482245 | 1950..1868 | 190 | 81.9 | Minus |
| chr3LHet | 2555433 | chr3LHet | 910625..910707 | 1868..1950 | 190 | 81.9 | Plus |
| chr3LHet | 2555433 | chr3LHet | 1227049..1227113 | 1884..1948 | 190 | 86.2 | Plus |
| chr3LHet | 2555433 | chr3LHet | 1305593..1305690 | 1853..1950 | 190 | 79.6 | Plus |
| chr3RHet | 2517486 | chr3RHet | 615634..615701 | 1883..1950 | 190 | 85.3 | Plus |
| chr3RHet | 2517486 | chr3RHet | 1102476..1102519 | 1974..2017 | 190 | 95.5 | Plus |
| chr3RHet | 2517486 | chr3RHet | 2382522..2382604 | 1950..1868 | 190 | 81.9 | Minus |
| chr3L | 24539361 | chr3L | 6141550..6141631 | 1949..1868 | 185 | 81.7 | Minus |
| chr3L | 24539361 | chr3L | 6307925..6307982 | 1924..1867 | 185 | 87.9 | Minus |
| chr3L | 24539361 | chr3L | 22629577..22629634 | 1934..1877 | 185 | 87.9 | Minus |
| chr3L | 24539361 | chr3L | 22769471..22769543 | 1950..1878 | 185 | 83.6 | Minus |
| chr3L | 24539361 | chr3L | 22993665..22993740 | 1952..1877 | 185 | 82.9 | Minus |
| chr3L | 24539361 | chr3L | 23044248..23044311 | 1949..1886 | 185 | 85.9 | Minus |
| chr3L | 24539361 | chr3L | 23937060..23937129 | 1937..1868 | 185 | 84.3 | Minus |
| chr3L | 24539361 | chr3L | 24290732..24290810 | 1868..1946 | 185 | 82.3 | Plus |
| chr3L | 24539361 | chr3L | 24480558..24480612 | 1894..1948 | 185 | 89.1 | Plus |
| chr4 | 1351717 | chr4 | 469741..469807 | 1938..1872 | 185 | 85.1 | Minus |
| chr4 | 1351717 | chr4 | 941906..941972 | 1877..1943 | 185 | 85.1 | Plus |
| chr3R | 27901430 | chr3R | 351783..351840 | 1950..1893 | 185 | 87.9 | Minus |
| chr3R | 27901430 | chr3R | 416960..417014 | 1896..1950 | 185 | 89.1 | Plus |
| chr3R | 27901430 | chr3R | 19714638..19714695 | 1878..1935 | 185 | 87.9 | Plus |
| chr2R | 21145070 | chr2R | 794460..794508 | 1931..1883 | 185 | 91.8 | Minus |
| chr2R | 21145070 | chr2R | 2834506..2834587 | 1868..1949 | 185 | 81.7 | Plus |
| chr2R | 21145070 | chr2R | 2910461..2910540 | 1951..1869 | 185 | 84.3 | Minus |
| chrU | 10048995 | chrU | 1316849..1316900 | 1919..1868 | 185 | 90.4 | Minus |
| chr2L | 23010047 | chr2L | 10403002..10403056 | 1870..1924 | 185 | 89.1 | Plus |
| chr3LHet | 2555433 | chr3LHet | 231128..231200 | 1950..1878 | 185 | 83.6 | Minus |
| chr3LHet | 2555433 | chr3LHet | 1227373..1227430 | 1893..1950 | 185 | 87.9 | Plus |
| chr3LHet | 2555433 | chr3LHet | 1992547..1992598 | 1919..1868 | 185 | 90.4 | Minus |
| chr3LHet | 2555433 | chr3LHet | 2152496..2152553 | 1893..1950 | 185 | 87.9 | Plus |
| chr3RHet | 2517486 | chr3RHet | 1977226..1977295 | 1878..1947 | 185 | 84.3 | Plus |
| chr3RHet | 2517486 | chr3RHet | 2372357..2372438 | 1950..1868 | 185 | 84.3 | Minus |
| chr3RHet | 2517486 | chr3RHet | 2472276..2472321 | 1879..1924 | 185 | 93.5 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 19:10:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CR41598-RA | 580 | CR41598-RA | 464..528 | 1884..1948 | 190 | 86.1 | Plus |
| Su(Ste):CR42418-RA | 1265 | CR42418-RA | 795..876 | 1868..1950 | 180 | 83.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:52:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9440055..9441967 | 2018..105 | 9520 | 99.9 | Minus |
| 3L | 28110227 | 3L | 9442124..9442228 | 105..1 | 525 | 100 | Minus |
| 4 | 1348131 | 4 | 421256..421336 | 1868..1948 | 270 | 88.9 | Plus |
| Y | 3667352 | Y | 10937..11022 | 1868..1953 | 265 | 87.2 | Plus |
| X | 23542271 | X | 22596404..22596477 | 1877..1950 | 265 | 90.5 | Plus |
| 2R | 25286936 | 2R | 5889187..5889263 | 1877..1953 | 265 | 89.6 | Plus |
| 2R | 25286936 | 2R | 765879..765960 | 1868..1949 | 260 | 87.8 | Plus |
| 2R | 25286936 | 2R | 772997..773078 | 1868..1949 | 260 | 87.8 | Plus |
| 2L | 23513712 | 2L | 22880037..22880118 | 1949..1868 | 260 | 87.8 | Minus |
| 2L | 23513712 | 2L | 22887155..22887236 | 1949..1868 | 260 | 87.8 | Minus |
| 4 | 1348131 | 4 | 165263..165349 | 1864..1950 | 255 | 86.2 | Plus |
| 4 | 1348131 | 4 | 381825..381899 | 1950..1876 | 255 | 89.3 | Minus |
| 3R | 32079331 | 3R | 31968726..31968797 | 1877..1948 | 255 | 90.3 | Plus |
| 3L | 28110227 | 3L | 25763482..25763564 | 1868..1950 | 250 | 86.7 | Plus |
| 4 | 1348131 | 4 | 667990..668063 | 1877..1950 | 250 | 89.2 | Plus |
| 4 | 1348131 | 4 | 949789..949862 | 1877..1950 | 250 | 89.2 | Plus |
| X | 23542271 | X | 22984217..22984293 | 1953..1877 | 250 | 88.3 | Minus |
| X | 23542271 | X | 23024426..23024502 | 1944..1868 | 250 | 88.3 | Minus |
| 2R | 25286936 | 2R | 6030247..6030326 | 1868..1947 | 250 | 87.5 | Plus |
| 2L | 23513712 | 2L | 3462724..3462806 | 1868..1950 | 250 | 86.7 | Plus |
| 2L | 23513712 | 2L | 21622234..21622316 | 1868..1950 | 250 | 86.7 | Plus |
| 2L | 23513712 | 2L | 21785555..21785640 | 1862..1947 | 250 | 86 | Plus |
| 3R | 32079331 | 3R | 12212548..12212621 | 1950..1877 | 250 | 89.2 | Minus |
| 2R | 25286936 | 2R | 798100..798172 | 1877..1949 | 245 | 89 | Plus |
| 2R | 25286936 | 2R | 821731..821803 | 1949..1877 | 245 | 89 | Minus |
| 2R | 25286936 | 2R | 25133063..25133153 | 1959..1869 | 245 | 84.6 | Minus |
| 2L | 23513712 | 2L | 22831287..22831359 | 1877..1949 | 245 | 89 | Plus |
| 2L | 23513712 | 2L | 22854919..22854991 | 1949..1877 | 245 | 89 | Minus |
| 3R | 32079331 | 3R | 32006007..32006079 | 1878..1950 | 245 | 89 | Plus |
| 3L | 28110227 | 3L | 91056..91127 | 1877..1948 | 240 | 88.9 | Plus |
| 4 | 1348131 | 4 | 842885..842968 | 1950..1867 | 240 | 85.7 | Minus |
| 2L | 23513712 | 2L | 22753309..22753398 | 1957..1868 | 240 | 84.4 | Minus |
| 3R | 32079331 | 3R | 2610298..2610378 | 1950..1870 | 240 | 86.4 | Minus |
| 3L | 28110227 | 3L | 22512218..22512300 | 1950..1868 | 235 | 85.5 | Minus |
| 4 | 1348131 | 4 | 100564..100637 | 1950..1877 | 235 | 87.8 | Minus |
| 4 | 1348131 | 4 | 235849..235931 | 1950..1868 | 235 | 85.5 | Minus |
| 4 | 1348131 | 4 | 1248085..1248158 | 1950..1877 | 235 | 87.8 | Minus |
| X | 23542271 | X | 21565154..21565224 | 1878..1948 | 235 | 88.7 | Plus |
| X | 23542271 | X | 21637775..21637857 | 1950..1868 | 235 | 85.5 | Minus |
| X | 23542271 | X | 22510905..22510984 | 1869..1948 | 235 | 86.2 | Plus |
| X | 23542271 | X | 22602433..22602506 | 1950..1877 | 235 | 87.8 | Minus |
| X | 23542271 | X | 22713688..22713761 | 1950..1877 | 235 | 87.8 | Minus |
| X | 23542271 | X | 22785276..22785349 | 1950..1877 | 235 | 87.8 | Minus |
| X | 23542271 | X | 23053578..23053660 | 1868..1950 | 235 | 85.5 | Plus |
| X | 23542271 | X | 23062479..23062561 | 1868..1950 | 235 | 85.5 | Plus |
| 2R | 25286936 | 2R | 372584..372657 | 1950..1877 | 235 | 87.8 | Minus |
| 2R | 25286936 | 2R | 453298..453371 | 1950..1877 | 235 | 87.8 | Minus |
| 2L | 23513712 | 2L | 21761948..21762021 | 1950..1877 | 235 | 87.8 | Minus |
| 2L | 23513712 | 2L | 21942280..21942362 | 1950..1868 | 235 | 85.5 | Minus |
| 3R | 32079331 | 3R | 4402506..4402579 | 1950..1877 | 235 | 87.8 | Minus |
| 3L | 28110227 | 3L | 22760900..22760957 | 1893..1950 | 230 | 93.1 | Plus |
| 3L | 28110227 | 3L | 19425107..19425185 | 1946..1868 | 230 | 86.1 | Minus |
| 2R | 25286936 | 2R | 7925449..7925530 | 1868..1949 | 230 | 85.4 | Plus |
| 2R | 25286936 | 2R | 25217898..25217970 | 1950..1878 | 230 | 87.7 | Minus |
| 2L | 23513712 | 2L | 21726083..21726155 | 1877..1949 | 230 | 87.7 | Plus |
| 3R | 32079331 | 3R | 3032359..3032431 | 1877..1949 | 230 | 87.7 | Plus |
| 3L | 28110227 | 3L | 39163..39243 | 1948..1868 | 225 | 85.2 | Minus |
| 3L | 28110227 | 3L | 19684198..19684272 | 1870..1944 | 225 | 86.7 | Plus |
| 4 | 1348131 | 4 | 254230..254310 | 1948..1868 | 225 | 85.2 | Minus |
| X | 23542271 | X | 3794873..3794944 | 1948..1877 | 225 | 87.5 | Minus |
| X | 23542271 | X | 3803966..3804037 | 1948..1877 | 225 | 87.5 | Minus |
| X | 23542271 | X | 4128495..4128575 | 1948..1868 | 225 | 85.2 | Minus |
| X | 23542271 | X | 22966001..22966072 | 1877..1948 | 225 | 87.5 | Plus |
| 2R | 25286936 | 2R | 5124379..5124444 | 1950..1885 | 225 | 89.4 | Minus |
| 3R | 32079331 | 3R | 4504146..4504217 | 1879..1950 | 225 | 87.5 | Plus |
| 3R | 32079331 | 3R | 4831579..4831662 | 1950..1867 | 225 | 84.5 | Minus |
| 3L | 28110227 | 3L | 18743100..18743173 | 1950..1877 | 220 | 86.5 | Minus |
| 3L | 28110227 | 3L | 24075080..24075159 | 1947..1868 | 220 | 85 | Minus |
| 3L | 28110227 | 3L | 24090919..24090995 | 1953..1877 | 220 | 85.7 | Minus |
| 3L | 28110227 | 3L | 24145283..24145359 | 1953..1877 | 220 | 85.7 | Minus |
| 3L | 28110227 | 3L | 25244106..25244188 | 1868..1950 | 220 | 84.3 | Plus |
| 3L | 28110227 | 3L | 26721492..26721565 | 1877..1950 | 220 | 86.5 | Plus |
| 3L | 28110227 | 3L | 26875826..26875908 | 1868..1950 | 220 | 84.3 | Plus |
| 3L | 28110227 | 3L | 27670315..27670397 | 1868..1950 | 220 | 84.3 | Plus |
| 4 | 1348131 | 4 | 379031..379113 | 1868..1950 | 220 | 84.3 | Plus |
| 4 | 1348131 | 4 | 381620..381672 | 1898..1950 | 220 | 94.3 | Plus |
| 4 | 1348131 | 4 | 939993..940060 | 1950..1883 | 220 | 88.2 | Minus |
| X | 23542271 | X | 193834..193916 | 1950..1868 | 220 | 84.3 | Minus |
| X | 23542271 | X | 6881196..6881278 | 1950..1868 | 220 | 84.3 | Minus |
| X | 23542271 | X | 18357043..18357125 | 1950..1868 | 220 | 84.3 | Minus |
| X | 23542271 | X | 19191722..19191804 | 1867..1949 | 220 | 84.3 | Plus |
| X | 23542271 | X | 21147369..21147451 | 1950..1868 | 220 | 84.3 | Minus |
| X | 23542271 | X | 21158588..21158670 | 1950..1868 | 220 | 84.3 | Minus |
| X | 23542271 | X | 21388075..21388148 | 1877..1950 | 220 | 86.5 | Plus |
| X | 23542271 | X | 22592164..22592246 | 1868..1950 | 220 | 84.3 | Plus |
| X | 23542271 | X | 22765113..22765183 | 1948..1878 | 220 | 87.3 | Minus |
| X | 23542271 | X | 22896300..22896385 | 1866..1951 | 220 | 83.7 | Plus |
| X | 23542271 | X | 22968801..22968883 | 1868..1950 | 220 | 84.3 | Plus |
| X | 23542271 | X | 22986888..22986952 | 1956..1892 | 220 | 89.2 | Minus |
| 2R | 25286936 | 2R | 366662..366735 | 1950..1877 | 220 | 86.5 | Minus |
| 2R | 25286936 | 2R | 3070110..3070183 | 1877..1950 | 220 | 86.5 | Plus |
| 2R | 25286936 | 2R | 4820022..4820095 | 1877..1950 | 220 | 86.5 | Plus |
| 2R | 25286936 | 2R | 25210966..25211039 | 1877..1950 | 220 | 86.5 | Plus |
| 2L | 23513712 | 2L | 116897..116979 | 1950..1868 | 220 | 84.3 | Minus |
| 2L | 23513712 | 2L | 7233148..7233227 | 1947..1868 | 220 | 85 | Minus |
| 2L | 23513712 | 2L | 21302035..21302117 | 1868..1950 | 220 | 84.3 | Plus |
| 2L | 23513712 | 2L | 21557328..21557401 | 1877..1950 | 220 | 86.5 | Plus |
| 3R | 32079331 | 3R | 893575..893657 | 1868..1950 | 220 | 84.3 | Plus |
| 3R | 32079331 | 3R | 4168583..4168665 | 1948..1866 | 220 | 84.3 | Minus |
| 3R | 32079331 | 3R | 4736534..4736616 | 1950..1868 | 220 | 84.3 | Minus |
| 3R | 32079331 | 3R | 16655838..16655911 | 1950..1877 | 220 | 86.5 | Minus |
| 3CEN | 744266 | 3CEN | 738753..738835 | 1868..1950 | 220 | 84.3 | Plus |
| 3L | 28110227 | 3L | 23006774..23006852 | 1948..1870 | 215 | 84.8 | Minus |
| 3L | 28110227 | 3L | 24073874..24073955 | 1949..1868 | 215 | 84.1 | Minus |
| X | 23542271 | X | 19809912..19809993 | 1868..1949 | 215 | 84.1 | Plus |
| X | 23542271 | X | 21486985..21487057 | 1877..1950 | 215 | 89.2 | Plus |
| 2R | 25286936 | 2R | 5247079..5247157 | 1957..1879 | 215 | 84.8 | Minus |
| 2R | 25286936 | 2R | 5794860..5794917 | 1950..1893 | 215 | 91.4 | Minus |
| 2R | 25286936 | 2R | 20361348..20361423 | 1943..1868 | 215 | 85.5 | Minus |
| 2L | 23513712 | 2L | 17974024..17974102 | 1946..1868 | 215 | 84.8 | Minus |
| 2L | 23513712 | 2L | 21383343..21383400 | 1893..1950 | 215 | 91.4 | Plus |
| 3R | 32079331 | 3R | 31957699..31957777 | 1946..1868 | 215 | 84.8 | Minus |
| 3L | 28110227 | 3L | 38774..38845 | 1948..1877 | 210 | 86.1 | Minus |
| 3L | 28110227 | 3L | 18742916..18742972 | 2030..1974 | 210 | 91.2 | Minus |
| 3L | 28110227 | 3L | 22547964..22548044 | 1868..1948 | 210 | 84 | Plus |
| 3L | 28110227 | 3L | 22916225..22916296 | 1948..1877 | 210 | 86.1 | Minus |
| 3L | 28110227 | 3L | 24165749..24165823 | 1953..1879 | 210 | 85.3 | Minus |
| 4 | 1348131 | 4 | 233749..233829 | 1948..1868 | 210 | 84 | Minus |
| 4 | 1348131 | 4 | 604610..604681 | 1877..1948 | 210 | 86.1 | Plus |
| X | 23542271 | X | 6757587..6757643 | 1894..1950 | 210 | 91.2 | Plus |
| X | 23542271 | X | 22849299..22849370 | 1877..1948 | 210 | 86.1 | Plus |
| 2R | 25286936 | 2R | 2563422..2563481 | 1877..1936 | 210 | 90 | Plus |
| 2R | 25286936 | 2R | 5793509..5793565 | 1868..1924 | 210 | 91.2 | Plus |
| 2L | 23513712 | 2L | 22338202..22338267 | 1885..1950 | 210 | 87.9 | Plus |
| 3L | 28110227 | 3L | 25113924..25114006 | 1950..1868 | 205 | 83.1 | Minus |
| 3L | 28110227 | 3L | 25368001..25368083 | 1950..1868 | 205 | 83.1 | Minus |
| 3L | 28110227 | 3L | 25483372..25483445 | 1877..1950 | 205 | 85.1 | Plus |
| 3L | 28110227 | 3L | 27681643..27681713 | 1877..1947 | 205 | 85.9 | Plus |
| 3L | 28110227 | 3L | 22938408..22938481 | 1877..1950 | 205 | 85.1 | Plus |
| 3L | 28110227 | 3L | 23023249..23023331 | 1950..1868 | 205 | 83.1 | Minus |
| 3L | 28110227 | 3L | 23769722..23769804 | 1868..1950 | 205 | 83.1 | Plus |
| 3L | 28110227 | 3L | 23772413..23772483 | 1878..1948 | 205 | 85.9 | Plus |
| 3L | 28110227 | 3L | 24400703..24400773 | 1953..1883 | 205 | 85.9 | Minus |
| 3L | 28110227 | 3L | 24727061..24727131 | 1883..1953 | 205 | 85.9 | Plus |
| 4 | 1348131 | 4 | 54791..54864 | 1865..1938 | 205 | 85.1 | Plus |
| 4 | 1348131 | 4 | 184962..185044 | 1868..1950 | 205 | 83.1 | Plus |
| 4 | 1348131 | 4 | 332347..332426 | 1868..1947 | 205 | 83.8 | Plus |
| 4 | 1348131 | 4 | 514394..514476 | 1950..1868 | 205 | 83.1 | Minus |
| X | 23542271 | X | 135705..135787 | 1950..1868 | 205 | 83.1 | Minus |
| X | 23542271 | X | 14124581..14124663 | 1950..1868 | 205 | 83.1 | Minus |
| X | 23542271 | X | 15934087..15934166 | 1947..1868 | 205 | 83.8 | Minus |
| X | 23542271 | X | 17554501..17554583 | 1868..1950 | 205 | 83.1 | Plus |
| X | 23542271 | X | 21421774..21421847 | 1950..1877 | 205 | 85.1 | Minus |
| X | 23542271 | X | 21604029..21604111 | 1868..1950 | 205 | 83.1 | Plus |
| X | 23542271 | X | 22744030..22744112 | 1868..1950 | 205 | 83.1 | Plus |
| 2R | 25286936 | 2R | 698577..698656 | 1947..1868 | 205 | 83.8 | Minus |
| 2R | 25286936 | 2R | 1764817..1764881 | 1950..1886 | 205 | 87.7 | Minus |
| 2R | 25286936 | 2R | 1996434..1996513 | 1869..1948 | 205 | 83.8 | Plus |
| 2R | 25286936 | 2R | 3105204..3105277 | 1877..1950 | 205 | 85.1 | Plus |
| 2R | 25286936 | 2R | 3589511..3589578 | 1950..1883 | 205 | 86.8 | Minus |
| 2R | 25286936 | 2R | 4008761..4008828 | 1950..1883 | 205 | 86.8 | Minus |
| 2R | 25286936 | 2R | 4130618..4130679 | 1892..1953 | 205 | 88.7 | Plus |
| 2R | 25286936 | 2R | 4379244..4379326 | 1868..1950 | 205 | 83.1 | Plus |
| 2R | 25286936 | 2R | 4695964..4696046 | 1868..1950 | 205 | 83.1 | Plus |
| 2R | 25286936 | 2R | 5367344..5367417 | 1877..1950 | 205 | 85.1 | Plus |
| 2R | 25286936 | 2R | 5610440..5610507 | 1883..1950 | 205 | 86.8 | Plus |
| 2R | 25286936 | 2R | 6162983..6163065 | 1950..1868 | 205 | 83.1 | Minus |
| 2L | 23513712 | 2L | 17458302..17458384 | 1950..1868 | 205 | 83.1 | Minus |
| 2L | 23513712 | 2L | 21708733..21708806 | 1950..1877 | 205 | 85.1 | Minus |
| 2L | 23513712 | 2L | 21775499..21775581 | 1868..1950 | 205 | 83.1 | Plus |
| 2L | 23513712 | 2L | 21797788..21797867 | 1948..1869 | 205 | 83.8 | Minus |
| 2L | 23513712 | 2L | 22067391..22067464 | 1877..1950 | 205 | 85.1 | Plus |
| 3R | 32079331 | 3R | 1839622..1839704 | 1868..1950 | 205 | 83.1 | Plus |
| 3R | 32079331 | 3R | 3467550..3467632 | 1868..1950 | 205 | 83.1 | Plus |
| 3R | 32079331 | 3R | 4176385..4176452 | 1950..1883 | 205 | 86.8 | Minus |
| 3R | 32079331 | 3R | 4183005..4183060 | 1893..1948 | 205 | 91.1 | Plus |
| 3R | 32079331 | 3R | 4268507..4268589 | 1868..1950 | 205 | 83.1 | Plus |
| 3L | 28110227 | 3L | 22854210..22854276 | 1884..1950 | 200 | 86.6 | Plus |
| 3L | 28110227 | 3L | 23022548..23022629 | 1869..1950 | 200 | 82.9 | Plus |
| 4 | 1348131 | 4 | 937996..938062 | 1950..1884 | 200 | 86.6 | Minus |
| X | 23542271 | X | 10939862..10939928 | 1934..1868 | 200 | 86.6 | Minus |
| X | 23542271 | X | 16838016..16838064 | 1876..1924 | 200 | 93.9 | Plus |
| X | 23542271 | X | 19814506..19814560 | 1868..1922 | 200 | 90.9 | Plus |
| 2R | 25286936 | 2R | 4377251..4377311 | 1943..1883 | 200 | 88.5 | Minus |
| 2R | 25286936 | 2R | 917182..917227 | 1905..1950 | 200 | 95.7 | Plus |
| 2R | 25286936 | 2R | 2109412..2109481 | 1881..1950 | 200 | 85.7 | Plus |
| 2R | 25286936 | 2R | 3552248..3552305 | 1950..1893 | 200 | 89.7 | Minus |
| 2R | 25286936 | 2R | 4705671..4705740 | 1879..1948 | 200 | 85.7 | Plus |
| 2R | 25286936 | 2R | 4916601..4916667 | 1884..1950 | 200 | 86.6 | Plus |
| 2R | 25286936 | 2R | 5424774..5424849 | 1961..1886 | 200 | 84.2 | Minus |
| 2R | 25286936 | 2R | 6254507..6254579 | 1877..1949 | 200 | 84.9 | Plus |
| 2R | 25286936 | 2R | 25196011..25196065 | 1896..1950 | 200 | 90.9 | Plus |
| 2L | 23513712 | 2L | 4030669..4030738 | 1946..1877 | 200 | 85.7 | Minus |
| 2L | 23513712 | 2L | 22311584..22311665 | 1948..1867 | 200 | 82.9 | Minus |
| 2L | 23513712 | 2L | 22318316..22318376 | 1878..1938 | 200 | 88.5 | Plus |
| 3R | 32079331 | 3R | 4307153..4307210 | 1950..1893 | 200 | 89.7 | Minus |
| 3R | 32079331 | 3R | 4413997..4414051 | 1868..1922 | 200 | 90.9 | Plus |
| 3R | 32079331 | 3R | 4596747..4596804 | 1950..1893 | 200 | 89.7 | Minus |
| 3R | 32079331 | 3R | 23891218..23891275 | 1878..1935 | 200 | 89.7 | Plus |
| 3L | 28110227 | 3L | 20501557..20501643 | 1864..1950 | 195 | 81.6 | Plus |
| 3L | 28110227 | 3L | 23635079..23635159 | 1868..1948 | 195 | 82.7 | Plus |
| 3L | 28110227 | 3L | 23648641..23648694 | 1921..1868 | 195 | 90.7 | Minus |
| 3L | 28110227 | 3L | 23771709..23771765 | 1868..1924 | 195 | 89.5 | Plus |
| 3L | 28110227 | 3L | 25255725..25255781 | 1924..1868 | 195 | 89.5 | Minus |
| 4 | 1348131 | 4 | 511844..511936 | 1948..1856 | 195 | 80.6 | Minus |
| 4 | 1348131 | 4 | 616688..616759 | 1948..1877 | 195 | 84.7 | Minus |
| 4 | 1348131 | 4 | 980673..980729 | 1924..1868 | 195 | 89.5 | Minus |
| X | 23542271 | X | 275261..275332 | 1939..1868 | 195 | 84.7 | Minus |
| X | 23542271 | X | 288443..288490 | 1924..1877 | 195 | 93.8 | Minus |
| X | 23542271 | X | 11905867..11905947 | 1868..1948 | 195 | 82.7 | Plus |
| X | 23542271 | X | 20381434..20381490 | 1868..1924 | 195 | 89.5 | Plus |
| X | 23542271 | X | 20528196..20528243 | 1939..1892 | 195 | 93.8 | Minus |
| X | 23542271 | X | 20806142..20806189 | 1877..1924 | 195 | 93.8 | Plus |
| X | 23542271 | X | 21133069..21133125 | 1924..1868 | 195 | 89.5 | Minus |
| X | 23542271 | X | 22629458..22629529 | 1948..1877 | 195 | 84.7 | Minus |
| 2R | 25286936 | 2R | 2247074..2247154 | 1950..1870 | 195 | 82.7 | Minus |
| 2R | 25286936 | 2R | 5116070..5116123 | 1897..1950 | 195 | 90.7 | Plus |
| 2R | 25286936 | 2R | 5213076..5213123 | 1877..1924 | 195 | 93.8 | Plus |
| 2R | 25286936 | 2R | 5528054..5528110 | 1868..1924 | 195 | 89.5 | Plus |
| 2L | 23513712 | 2L | 21620697..21620777 | 1868..1948 | 195 | 82.7 | Plus |
| 2L | 23513712 | 2L | 21923395..21923472 | 1946..1869 | 195 | 83.3 | Minus |
| 2L | 23513712 | 2L | 22163720..22163803 | 1951..1868 | 195 | 82.1 | Minus |
| 2L | 23513712 | 2L | 22566494..22566565 | 1948..1877 | 195 | 84.7 | Minus |
| 2L | 23513712 | 2L | 22745975..22746046 | 1877..1948 | 195 | 84.7 | Plus |
| 2L | 23513712 | 2L | 22759376..22759447 | 1948..1877 | 195 | 84.7 | Minus |
| 2L | 23513712 | 2L | 23028740..23028802 | 1869..1931 | 195 | 87.3 | Plus |
| 3R | 32079331 | 3R | 593172..593252 | 1948..1868 | 195 | 82.7 | Minus |
| 3R | 32079331 | 3R | 597977..598060 | 1950..1867 | 195 | 82.1 | Minus |
| 3R | 32079331 | 3R | 2392551..2392595 | 1974..2018 | 195 | 95.6 | Plus |
| 3R | 32079331 | 3R | 2941273..2941344 | 1868..1939 | 195 | 84.7 | Plus |
| 3L | 28110227 | 3L | 19488904..19488986 | 1950..1868 | 190 | 81.9 | Minus |
| 3L | 28110227 | 3L | 23028991..23029070 | 1948..1869 | 190 | 82.5 | Minus |
| 3L | 28110227 | 3L | 23049249..23049313 | 1886..1950 | 190 | 86.2 | Plus |
| 3L | 28110227 | 3L | 23225835..23225887 | 1898..1950 | 190 | 90.6 | Plus |
| 3L | 28110227 | 3L | 23720794..23720876 | 1950..1868 | 190 | 81.9 | Minus |
| 3L | 28110227 | 3L | 23872110..23872183 | 1877..1950 | 190 | 83.8 | Plus |
| 3L | 28110227 | 3L | 24242383..24242465 | 1868..1950 | 190 | 81.9 | Plus |
| 3L | 28110227 | 3L | 24725679..24725746 | 1950..1883 | 190 | 85.3 | Minus |
| 3L | 28110227 | 3L | 24998835..24998917 | 1950..1868 | 190 | 81.9 | Minus |
| 4 | 1348131 | 4 | 451090..451151 | 1938..1877 | 190 | 87.1 | Minus |
| 4 | 1348131 | 4 | 535915..535991 | 1869..1945 | 190 | 83.1 | Plus |
| 4 | 1348131 | 4 | 944853..944923 | 1877..1947 | 190 | 84.5 | Plus |
| 4 | 1348131 | 4 | 1004996..1005063 | 1883..1950 | 190 | 85.3 | Plus |
| X | 23542271 | X | 705512..705567 | 1950..1895 | 190 | 89.3 | Minus |
| 2R | 25286936 | 2R | 367346..367428 | 1868..1950 | 190 | 81.9 | Plus |
| 2R | 25286936 | 2R | 373268..373350 | 1868..1950 | 190 | 81.9 | Plus |
| 2R | 25286936 | 2R | 453981..454063 | 1868..1950 | 190 | 81.9 | Plus |
| 2R | 25286936 | 2R | 672313..672383 | 1938..1868 | 190 | 84.5 | Minus |
| 2L | 23513712 | 2L | 18159651..18159715 | 1950..1886 | 190 | 86.2 | Minus |
| 2L | 23513712 | 2L | 21265225..21265307 | 1950..1868 | 190 | 81.9 | Minus |
| 2L | 23513712 | 2L | 21338688..21338743 | 1893..1948 | 190 | 89.3 | Plus |
| 2L | 23513712 | 2L | 21346953..21347014 | 1945..1884 | 190 | 87.1 | Minus |
| 2L | 23513712 | 2L | 21619397..21619479 | 1950..1868 | 190 | 81.9 | Minus |
| 2L | 23513712 | 2L | 21856864..21856937 | 1877..1950 | 190 | 83.8 | Plus |
| 2L | 23513712 | 2L | 22070468..22070529 | 1877..1938 | 190 | 87.1 | Plus |
| 2L | 23513712 | 2L | 22124338..22124405 | 1883..1950 | 190 | 85.3 | Plus |
| 2L | 23513712 | 2L | 22179071..22179153 | 1950..1868 | 190 | 81.9 | Minus |
| 2L | 23513712 | 2L | 22369955..22370010 | 1938..1883 | 190 | 89.3 | Minus |
| 2L | 23513712 | 2L | 22631504..22631577 | 1877..1950 | 190 | 83.8 | Plus |
| 2L | 23513712 | 2L | 22716670..22716737 | 1883..1950 | 190 | 85.3 | Plus |
| 2L | 23513712 | 2L | 22993245..22993318 | 1877..1950 | 190 | 83.8 | Plus |
| 3R | 32079331 | 3R | 889884..889951 | 1950..1883 | 190 | 85.3 | Minus |
| 3R | 32079331 | 3R | 2417530..2417603 | 1950..1877 | 190 | 83.8 | Minus |
| 3R | 32079331 | 3R | 4086029..4086111 | 1950..1868 | 190 | 81.9 | Minus |
| 3R | 32079331 | 3R | 4186633..4186703 | 1948..1878 | 190 | 84.5 | Minus |
| 3R | 32079331 | 3R | 32064337..32064416 | 1868..1947 | 190 | 82.5 | Plus |
| 3R | 32079331 | 3R | 32037753..32037835 | 1950..1868 | 190 | 81.9 | Minus |
| 4 | 1348131 | 4 | 449182..449248 | 1938..1872 | 185 | 85.1 | Minus |
| 4 | 1348131 | 4 | 921374..921440 | 1877..1943 | 185 | 85.1 | Plus |
| Y | 3667352 | Y | 3569751..3569805 | 1896..1950 | 185 | 89.1 | Plus |
| 2L | 23513712 | 2L | 10404149..10404203 | 1870..1924 | 185 | 89.1 | Plus |
| 2L | 23513712 | 2L | 22524348..22524414 | 1950..1884 | 185 | 85.1 | Minus |
| 2L | 23513712 | 2L | 23315224..23315281 | 1950..1893 | 185 | 87.9 | Minus |
| 3R | 32079331 | 3R | 4128532..4128577 | 1879..1924 | 185 | 93.5 | Plus |
| 3R | 32079331 | 3R | 4526065..4526122 | 1950..1893 | 185 | 87.9 | Minus |
| 3R | 32079331 | 3R | 4591250..4591304 | 1896..1950 | 185 | 89.1 | Plus |
| 3R | 32079331 | 3R | 3510863..3510932 | 1947..1878 | 185 | 84.3 | Minus |
| 3R | 32079331 | 3R | 4075862..4075943 | 1950..1868 | 185 | 84.3 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:39:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28103327 | 3L | 9433155..9435067 | 2018..105 | 9530 | 99.9 | Minus |
| 3L | 28103327 | 3L | 9435224..9435328 | 105..1 | 525 | 100 | Minus |
| 4 | 1331231 | 4 | 421256..421336 | 1868..1948 | 270 | 88.8 | Plus |
| 2R | 25260384 | 2R | 5890386..5890462 | 1877..1953 | 265 | 89.6 | Plus |
| X | 23527363 | X | 22581496..22581569 | 1877..1950 | 265 | 90.5 | Plus |
| Unmapped_scaffold_57 | 13063 | Unmapped_scaffold_57 | 11065..11150 | 1953..1868 | 265 | 87.2 | Minus |
| Y | 3410481 | Y | 2857719..2857804 | 1868..1953 | 265 | 87.2 | Plus |
| 2R | 25260384 | 2R | 772997..773078 | 1868..1949 | 260 | 87.8 | Plus |
| 2R | 25260384 | 2R | 765879..765960 | 1868..1949 | 260 | 87.8 | Plus |
| 2L | 23513712 | 2L | 22887155..22887236 | 1949..1868 | 260 | 87.8 | Minus |
| 2L | 23513712 | 2L | 22880037..22880118 | 1949..1868 | 260 | 87.8 | Minus |
| 3R | 31820162 | 3R | 31709557..31709628 | 1877..1948 | 255 | 90.2 | Plus |
| 4 | 1331231 | 4 | 165263..165349 | 1864..1950 | 255 | 86.2 | Plus |
| 4 | 1331231 | 4 | 381825..381899 | 1950..1876 | 255 | 89.3 | Minus |
| 3L | 28103327 | 3L | 25756582..25756664 | 1868..1950 | 250 | 86.7 | Plus |
| 2R | 25260384 | 2R | 6031446..6031525 | 1868..1947 | 250 | 87.5 | Plus |
| X | 23527363 | X | 23009518..23009594 | 1944..1868 | 250 | 88.3 | Minus |
| X | 23527363 | X | 22969309..22969385 | 1953..1877 | 250 | 88.3 | Minus |
| 2L | 23513712 | 2L | 21622234..21622316 | 1868..1950 | 250 | 86.7 | Plus |
| 2L | 23513712 | 2L | 3462724..3462806 | 1868..1950 | 250 | 86.7 | Plus |
| 2L | 23513712 | 2L | 21785555..21785640 | 1862..1947 | 250 | 86 | Plus |
| 3R | 31820162 | 3R | 11953379..11953452 | 1950..1877 | 250 | 89.1 | Minus |
| 4 | 1331231 | 4 | 949789..949862 | 1877..1950 | 250 | 89.1 | Plus |
| 4 | 1331231 | 4 | 667990..668063 | 1877..1950 | 250 | 89.1 | Plus |
| 2R | 25260384 | 2R | 798100..798172 | 1877..1949 | 245 | 89 | Plus |
| 2R | 25260384 | 2R | 821731..821803 | 1949..1877 | 245 | 89 | Minus |
| 2R | 25260384 | 2R | 25134262..25134352 | 1959..1869 | 245 | 84.6 | Minus |
| 2L | 23513712 | 2L | 22831287..22831359 | 1877..1949 | 245 | 89 | Plus |
| 2L | 23513712 | 2L | 22854919..22854991 | 1949..1877 | 245 | 89 | Minus |
| 3R | 31820162 | 3R | 31746838..31746910 | 1878..1950 | 245 | 89 | Plus |
| 3L | 28103327 | 3L | 91056..91127 | 1877..1948 | 240 | 88.8 | Plus |
| 2L | 23513712 | 2L | 22753309..22753398 | 1957..1868 | 240 | 84.4 | Minus |
| 3R | 31820162 | 3R | 2407876..2407956 | 1950..1870 | 240 | 86.4 | Minus |
| 4 | 1331231 | 4 | 842885..842968 | 1950..1867 | 240 | 85.7 | Minus |
| 3L | 28103327 | 3L | 22505318..22505400 | 1950..1868 | 235 | 85.5 | Minus |
| 2R | 25260384 | 2R | 453298..453371 | 1950..1877 | 235 | 87.8 | Minus |
| 2R | 25260384 | 2R | 372584..372657 | 1950..1877 | 235 | 87.8 | Minus |
| X | 23527363 | X | 21550246..21550316 | 1878..1948 | 235 | 88.7 | Plus |
| X | 23527363 | X | 22495997..22496076 | 1869..1948 | 235 | 86.2 | Plus |
| X | 23527363 | X | 23047571..23047653 | 1868..1950 | 235 | 85.5 | Plus |
| X | 23527363 | X | 23038670..23038752 | 1868..1950 | 235 | 85.5 | Plus |
| X | 23527363 | X | 22770368..22770441 | 1950..1877 | 235 | 87.8 | Minus |
| X | 23527363 | X | 22698780..22698853 | 1950..1877 | 235 | 87.8 | Minus |
| X | 23527363 | X | 22587525..22587598 | 1950..1877 | 235 | 87.8 | Minus |
| X | 23527363 | X | 21622867..21622949 | 1950..1868 | 235 | 85.5 | Minus |
| 2L | 23513712 | 2L | 21761948..21762021 | 1950..1877 | 235 | 87.8 | Minus |
| 2L | 23513712 | 2L | 21942280..21942362 | 1950..1868 | 235 | 85.5 | Minus |
| 3R | 31820162 | 3R | 4143337..4143410 | 1950..1877 | 235 | 87.8 | Minus |
| 4 | 1331231 | 4 | 1231185..1231258 | 1950..1877 | 235 | 87.8 | Minus |
| 4 | 1331231 | 4 | 100564..100637 | 1950..1877 | 235 | 87.8 | Minus |
| 4 | 1331231 | 4 | 235849..235931 | 1950..1868 | 235 | 85.5 | Minus |
| 3L | 28103327 | 3L | 22754000..22754057 | 1893..1950 | 230 | 93.1 | Plus |
| 3L | 28103327 | 3L | 19418207..19418285 | 1946..1868 | 230 | 86 | Minus |
| 2R | 25260384 | 2R | 7926648..7926729 | 1868..1949 | 230 | 85.3 | Plus |
| 2R | 25260384 | 2R | 25219097..25219169 | 1950..1878 | 230 | 87.6 | Minus |
| 2L | 23513712 | 2L | 21726083..21726155 | 1877..1949 | 230 | 87.6 | Plus |
| 3R | 31820162 | 3R | 2829937..2830009 | 1877..1949 | 230 | 87.6 | Plus |
| 3L | 28103327 | 3L | 19677298..19677372 | 1870..1944 | 225 | 86.6 | Plus |
| 3L | 28103327 | 3L | 39163..39243 | 1948..1868 | 225 | 85.1 | Minus |
| 2R | 25260384 | 2R | 5125578..5125643 | 1950..1885 | 225 | 89.3 | Minus |
| X | 23527363 | X | 22951093..22951164 | 1877..1948 | 225 | 87.5 | Plus |
| X | 23527363 | X | 21472077..21472149 | 1877..1950 | 225 | 89.1 | Plus |
| X | 23527363 | X | 3812064..3812135 | 1948..1877 | 225 | 87.5 | Minus |
| X | 23527363 | X | 3802971..3803042 | 1948..1877 | 225 | 87.5 | Minus |
| X | 23527363 | X | 4136593..4136673 | 1948..1868 | 225 | 85.1 | Minus |
| 3R | 31820162 | 3R | 4244977..4245048 | 1879..1950 | 225 | 87.5 | Plus |
| 3R | 31820162 | 3R | 4572410..4572493 | 1950..1867 | 225 | 84.5 | Minus |
| 4 | 1331231 | 4 | 254230..254310 | 1948..1868 | 225 | 85.1 | Minus |
| 3L | 28103327 | 3L | 26714592..26714665 | 1877..1950 | 220 | 86.4 | Plus |
| 3L | 28103327 | 3L | 27663415..27663497 | 1868..1950 | 220 | 84.3 | Plus |
| 3L | 28103327 | 3L | 26868926..26869008 | 1868..1950 | 220 | 84.3 | Plus |
| 3L | 28103327 | 3L | 25237206..25237288 | 1868..1950 | 220 | 84.3 | Plus |
| 3L | 28103327 | 3L | 18736200..18736273 | 1950..1877 | 220 | 86.4 | Minus |
| 3L | 28103327 | 3L | 24138383..24138459 | 1953..1877 | 220 | 85.7 | Minus |
| 3L | 28103327 | 3L | 24084019..24084095 | 1953..1877 | 220 | 85.7 | Minus |
| 3L | 28103327 | 3L | 24068180..24068259 | 1947..1868 | 220 | 85 | Minus |
| 2R | 25260384 | 2R | 25212165..25212238 | 1877..1950 | 220 | 86.4 | Plus |
| 2R | 25260384 | 2R | 4821221..4821294 | 1877..1950 | 220 | 86.4 | Plus |
| 2R | 25260384 | 2R | 3070110..3070183 | 1877..1950 | 220 | 86.4 | Plus |
| 2R | 25260384 | 2R | 366662..366735 | 1950..1877 | 220 | 86.4 | Minus |
| X | 23527363 | X | 21373167..21373240 | 1877..1950 | 220 | 86.4 | Plus |
| X | 23527363 | X | 22953893..22953975 | 1868..1950 | 220 | 84.3 | Plus |
| X | 23527363 | X | 22577256..22577338 | 1868..1950 | 220 | 84.3 | Plus |
| X | 23527363 | X | 19199820..19199902 | 1867..1949 | 220 | 84.3 | Plus |
| X | 23527363 | X | 22881392..22881477 | 1866..1951 | 220 | 83.7 | Plus |
| X | 23527363 | X | 22971980..22972044 | 1956..1892 | 220 | 89.2 | Minus |
| X | 23527363 | X | 22750205..22750275 | 1948..1878 | 220 | 87.3 | Minus |
| X | 23527363 | X | 21143680..21143762 | 1950..1868 | 220 | 84.3 | Minus |
| X | 23527363 | X | 21132461..21132543 | 1950..1868 | 220 | 84.3 | Minus |
| X | 23527363 | X | 18365141..18365223 | 1950..1868 | 220 | 84.3 | Minus |
| X | 23527363 | X | 6889294..6889376 | 1950..1868 | 220 | 84.3 | Minus |
| X | 23527363 | X | 201932..202014 | 1950..1868 | 220 | 84.3 | Minus |
| 2L | 23513712 | 2L | 21557328..21557401 | 1877..1950 | 220 | 86.4 | Plus |
| 2L | 23513712 | 2L | 21302035..21302117 | 1868..1950 | 220 | 84.3 | Plus |
| 2L | 23513712 | 2L | 7233148..7233227 | 1947..1868 | 220 | 85 | Minus |
| 2L | 23513712 | 2L | 116897..116979 | 1950..1868 | 220 | 84.3 | Minus |
| 3R | 31820162 | 3R | 691153..691235 | 1868..1950 | 220 | 84.3 | Plus |
| 3R | 31820162 | 3R | 16396669..16396742 | 1950..1877 | 220 | 86.4 | Minus |
| 3R | 31820162 | 3R | 4477365..4477447 | 1950..1868 | 220 | 84.3 | Minus |
| 3R | 31820162 | 3R | 3830021..3830103 | 1948..1866 | 220 | 84.3 | Minus |
| 4 | 1331231 | 4 | 381620..381672 | 1898..1950 | 220 | 94.3 | Plus |
| 4 | 1331231 | 4 | 379031..379113 | 1868..1950 | 220 | 84.3 | Plus |
| 4 | 1331231 | 4 | 939993..940060 | 1950..1883 | 220 | 88.2 | Minus |
| Unimproved_211000022280328_7341_9229 | 1888 | Unimproved_211000022280328_7341_9229 | 1244..1326 | 1868..1950 | 220 | 84.3 | Plus |
| Unmapped_scaffold_62 | 167859 | Unmapped_scaffold_62 | 30105..30187 | 1868..1950 | 220 | 84.3 | Plus |
| 3L | 28103327 | 3L | 24066974..24067055 | 1949..1868 | 215 | 84.1 | Minus |
| 3L | 28103327 | 3L | 22999874..22999952 | 1948..1870 | 215 | 84.8 | Minus |
| 2R | 25260384 | 2R | 5796059..5796116 | 1950..1893 | 215 | 91.3 | Minus |
| 2R | 25260384 | 2R | 20362547..20362622 | 1943..1868 | 215 | 85.5 | Minus |
| 2R | 25260384 | 2R | 5248278..5248356 | 1957..1879 | 215 | 84.8 | Minus |
| X | 23527363 | X | 19818010..19818091 | 1868..1949 | 215 | 84.1 | Plus |
| 2L | 23513712 | 2L | 21383343..21383400 | 1893..1950 | 215 | 91.3 | Plus |
| 2L | 23513712 | 2L | 17974024..17974102 | 1946..1868 | 215 | 84.8 | Minus |
| 3R | 31820162 | 3R | 31698530..31698608 | 1946..1868 | 215 | 84.8 | Minus |
| 3L | 28103327 | 3L | 22541064..22541144 | 1868..1948 | 210 | 83.9 | Plus |
| 3L | 28103327 | 3L | 18736016..18736072 | 2030..1974 | 210 | 91.2 | Minus |
| 3L | 28103327 | 3L | 22909325..22909396 | 1948..1877 | 210 | 86.1 | Minus |
| 3L | 28103327 | 3L | 38774..38845 | 1948..1877 | 210 | 86.1 | Minus |
| 3L | 28103327 | 3L | 24158849..24158923 | 1953..1879 | 210 | 85.3 | Minus |
| 2R | 25260384 | 2R | 5794708..5794764 | 1868..1924 | 210 | 91.2 | Plus |
| 2R | 25260384 | 2R | 2563422..2563481 | 1877..1936 | 210 | 90 | Plus |
| X | 23527363 | X | 22834391..22834462 | 1877..1948 | 210 | 86.1 | Plus |
| X | 23527363 | X | 6765685..6765741 | 1894..1950 | 210 | 91.2 | Plus |
| 2L | 23513712 | 2L | 22338202..22338267 | 1885..1950 | 210 | 87.8 | Plus |
| 4 | 1331231 | 4 | 604610..604681 | 1877..1948 | 210 | 86.1 | Plus |
| 4 | 1331231 | 4 | 233749..233829 | 1948..1868 | 210 | 83.9 | Minus |
| 3L | 28103327 | 3L | 22931508..22931581 | 1877..1950 | 205 | 85.1 | Plus |
| 3L | 28103327 | 3L | 27674743..27674813 | 1877..1947 | 205 | 85.9 | Plus |
| 3L | 28103327 | 3L | 24720161..24720231 | 1883..1953 | 205 | 85.9 | Plus |
| 3L | 28103327 | 3L | 23762822..23762904 | 1868..1950 | 205 | 83.1 | Plus |
| 3L | 28103327 | 3L | 24393803..24393873 | 1953..1883 | 205 | 85.9 | Minus |
| 3L | 28103327 | 3L | 23765513..23765583 | 1878..1948 | 205 | 85.9 | Plus |
| 3L | 28103327 | 3L | 25476472..25476545 | 1877..1950 | 205 | 85.1 | Plus |
| 3L | 28103327 | 3L | 25361101..25361183 | 1950..1868 | 205 | 83.1 | Minus |
| 3L | 28103327 | 3L | 25107024..25107106 | 1950..1868 | 205 | 83.1 | Minus |
| 3L | 28103327 | 3L | 23016349..23016431 | 1950..1868 | 205 | 83.1 | Minus |
| 2R | 25260384 | 2R | 1996434..1996513 | 1869..1948 | 205 | 83.7 | Plus |
| 2R | 25260384 | 2R | 4131817..4131878 | 1892..1953 | 205 | 88.7 | Plus |
| 2R | 25260384 | 2R | 5611639..5611706 | 1883..1950 | 205 | 86.7 | Plus |
| 2R | 25260384 | 2R | 5368543..5368616 | 1877..1950 | 205 | 85.1 | Plus |
| 2R | 25260384 | 2R | 3105204..3105277 | 1877..1950 | 205 | 85.1 | Plus |
| 2R | 25260384 | 2R | 4697163..4697245 | 1868..1950 | 205 | 83.1 | Plus |
| 2R | 25260384 | 2R | 4380443..4380525 | 1868..1950 | 205 | 83.1 | Plus |
| 2R | 25260384 | 2R | 1764817..1764881 | 1950..1886 | 205 | 87.6 | Minus |
| 2R | 25260384 | 2R | 4009960..4010027 | 1950..1883 | 205 | 86.7 | Minus |
| 2R | 25260384 | 2R | 3590710..3590777 | 1950..1883 | 205 | 86.7 | Minus |
| 2R | 25260384 | 2R | 698577..698656 | 1947..1868 | 205 | 83.7 | Minus |
| 2R | 25260384 | 2R | 6164182..6164264 | 1950..1868 | 205 | 83.1 | Minus |
| X | 23527363 | X | 22729122..22729204 | 1868..1950 | 205 | 83.1 | Plus |
| X | 23527363 | X | 21589121..21589203 | 1868..1950 | 205 | 83.1 | Plus |
| X | 23527363 | X | 17562599..17562681 | 1868..1950 | 205 | 83.1 | Plus |
| X | 23527363 | X | 21406866..21406939 | 1950..1877 | 205 | 85.1 | Minus |
| X | 23527363 | X | 15942185..15942264 | 1947..1868 | 205 | 83.7 | Minus |
| X | 23527363 | X | 14132679..14132761 | 1950..1868 | 205 | 83.1 | Minus |
| X | 23527363 | X | 143803..143885 | 1950..1868 | 205 | 83.1 | Minus |
| 2L | 23513712 | 2L | 22067391..22067464 | 1877..1950 | 205 | 85.1 | Plus |
| 2L | 23513712 | 2L | 21775499..21775581 | 1868..1950 | 205 | 83.1 | Plus |
| 2L | 23513712 | 2L | 21708733..21708806 | 1950..1877 | 205 | 85.1 | Minus |
| 2L | 23513712 | 2L | 21797788..21797867 | 1948..1869 | 205 | 83.7 | Minus |
| 2L | 23513712 | 2L | 17458302..17458384 | 1950..1868 | 205 | 83.1 | Minus |
| 3R | 31820162 | 3R | 3923836..3923891 | 1893..1948 | 205 | 91 | Plus |
| 3R | 31820162 | 3R | 4009338..4009420 | 1868..1950 | 205 | 83.1 | Plus |
| 3R | 31820162 | 3R | 3128988..3129070 | 1868..1950 | 205 | 83.1 | Plus |
| 3R | 31820162 | 3R | 1637200..1637282 | 1868..1950 | 205 | 83.1 | Plus |
| 3R | 31820162 | 3R | 3917216..3917283 | 1950..1883 | 205 | 86.7 | Minus |
| 4 | 1331231 | 4 | 332347..332426 | 1868..1947 | 205 | 83.7 | Plus |
| 4 | 1331231 | 4 | 54791..54864 | 1865..1938 | 205 | 85.1 | Plus |
| 4 | 1331231 | 4 | 184962..185044 | 1868..1950 | 205 | 83.1 | Plus |
| 4 | 1331231 | 4 | 514394..514476 | 1950..1868 | 205 | 83.1 | Minus |
| 3L | 28103327 | 3L | 22847310..22847376 | 1884..1950 | 200 | 86.5 | Plus |
| 3L | 28103327 | 3L | 23015648..23015729 | 1869..1950 | 200 | 82.9 | Plus |
| 2R | 25260384 | 2R | 917182..917227 | 1905..1950 | 200 | 95.6 | Plus |
| 2R | 25260384 | 2R | 25197210..25197264 | 1896..1950 | 200 | 90.9 | Plus |
| 2R | 25260384 | 2R | 4917800..4917866 | 1884..1950 | 200 | 86.5 | Plus |
| 2R | 25260384 | 2R | 4706870..4706939 | 1879..1948 | 200 | 85.7 | Plus |
| 2R | 25260384 | 2R | 2109412..2109481 | 1881..1950 | 200 | 85.7 | Plus |
| 2R | 25260384 | 2R | 6255706..6255778 | 1877..1949 | 200 | 84.9 | Plus |
| 2R | 25260384 | 2R | 3553447..3553504 | 1950..1893 | 200 | 89.6 | Minus |
| 2R | 25260384 | 2R | 4378450..4378510 | 1943..1883 | 200 | 88.5 | Minus |
| 2R | 25260384 | 2R | 5425973..5426048 | 1961..1886 | 200 | 84.2 | Minus |
| X | 23527363 | X | 16846114..16846162 | 1876..1924 | 200 | 93.8 | Plus |
| X | 23527363 | X | 19822604..19822658 | 1868..1922 | 200 | 90.9 | Plus |
| X | 23527363 | X | 10947960..10948026 | 1934..1868 | 200 | 86.5 | Minus |
| 2L | 23513712 | 2L | 22318316..22318376 | 1878..1938 | 200 | 88.5 | Plus |
| 2L | 23513712 | 2L | 4030669..4030738 | 1946..1877 | 200 | 85.7 | Minus |
| 2L | 23513712 | 2L | 22311584..22311665 | 1948..1867 | 200 | 82.9 | Minus |
| 3R | 31820162 | 3R | 4154828..4154882 | 1868..1922 | 200 | 90.9 | Plus |
| 3R | 31820162 | 3R | 23632049..23632106 | 1878..1935 | 200 | 89.6 | Plus |
| 3R | 31820162 | 3R | 4337578..4337635 | 1950..1893 | 200 | 89.6 | Minus |
| 3R | 31820162 | 3R | 4047984..4048041 | 1950..1893 | 200 | 89.6 | Minus |
| 4 | 1331231 | 4 | 937996..938062 | 1950..1884 | 200 | 86.5 | Minus |
| 3L | 28103327 | 3L | 23764809..23764865 | 1868..1924 | 195 | 89.4 | Plus |
| 3L | 28103327 | 3L | 23628179..23628259 | 1868..1948 | 195 | 82.7 | Plus |
| 3L | 28103327 | 3L | 20494657..20494743 | 1864..1950 | 195 | 81.6 | Plus |
| 3L | 28103327 | 3L | 23641741..23641794 | 1921..1868 | 195 | 90.7 | Minus |
| 3L | 28103327 | 3L | 25248825..25248881 | 1924..1868 | 195 | 89.4 | Minus |
| 2R | 25260384 | 2R | 5214275..5214322 | 1877..1924 | 195 | 93.7 | Plus |
| 2R | 25260384 | 2R | 5117269..5117322 | 1897..1950 | 195 | 90.7 | Plus |
| 2R | 25260384 | 2R | 5529253..5529309 | 1868..1924 | 195 | 89.4 | Plus |
| 2R | 25260384 | 2R | 2247074..2247154 | 1950..1870 | 195 | 82.7 | Minus |
| 2R | 25260384 | 2R | 7024241..7024320 | 1951..1869 | 195 | 84.3 | Minus |
| X | 23527363 | X | 20791234..20791281 | 1877..1924 | 195 | 93.7 | Plus |
| X | 23527363 | X | 20366526..20366582 | 1868..1924 | 195 | 89.4 | Plus |
| X | 23527363 | X | 11913965..11914045 | 1868..1948 | 195 | 82.7 | Plus |
| X | 23527363 | X | 20513288..20513335 | 1939..1892 | 195 | 93.7 | Minus |
| X | 23527363 | X | 296541..296588 | 1924..1877 | 195 | 93.7 | Minus |
| X | 23527363 | X | 21118161..21118217 | 1924..1868 | 195 | 89.4 | Minus |
| X | 23527363 | X | 22614550..22614621 | 1948..1877 | 195 | 84.7 | Minus |
| X | 23527363 | X | 283359..283430 | 1939..1868 | 195 | 84.7 | Minus |
| 2L | 23513712 | 2L | 23028740..23028802 | 1869..1931 | 195 | 87.3 | Plus |
| 2L | 23513712 | 2L | 22745975..22746046 | 1877..1948 | 195 | 84.7 | Plus |
| 2L | 23513712 | 2L | 21620697..21620777 | 1868..1948 | 195 | 82.7 | Plus |
| 2L | 23513712 | 2L | 22759376..22759447 | 1948..1877 | 195 | 84.7 | Minus |
| 2L | 23513712 | 2L | 22566494..22566565 | 1948..1877 | 195 | 84.7 | Minus |
| 2L | 23513712 | 2L | 21923395..21923472 | 1946..1869 | 195 | 83.3 | Minus |
| 2L | 23513712 | 2L | 22163720..22163803 | 1951..1868 | 195 | 82.1 | Minus |
| 3R | 31820162 | 3R | 2190129..2190173 | 1974..2018 | 195 | 95.5 | Plus |
| 3R | 31820162 | 3R | 2738851..2738922 | 1868..1939 | 195 | 84.7 | Plus |
| 3R | 31820162 | 3R | 4332054..4332135 | 1868..1950 | 195 | 84.3 | Plus |
| 3R | 31820162 | 3R | 390750..390830 | 1948..1868 | 195 | 82.7 | Minus |
| 3R | 31820162 | 3R | 3737300..3737381 | 1950..1868 | 195 | 84.3 | Minus |
| 3R | 31820162 | 3R | 395555..395638 | 1950..1867 | 195 | 82.1 | Minus |
| 4 | 1331231 | 4 | 980673..980729 | 1924..1868 | 195 | 89.4 | Minus |
| 4 | 1331231 | 4 | 616688..616759 | 1948..1877 | 195 | 84.7 | Minus |
| 4 | 1331231 | 4 | 511844..511936 | 1948..1856 | 195 | 80.6 | Minus |
| 3L | 28103327 | 3L | 23042349..23042413 | 1886..1950 | 190 | 86.1 | Plus |
| 3L | 28103327 | 3L | 23218935..23218987 | 1898..1950 | 190 | 90.5 | Plus |
| 3L | 28103327 | 3L | 25837483..25837547 | 1884..1948 | 190 | 86.1 | Plus |
| 3L | 28103327 | 3L | 23865210..23865283 | 1877..1950 | 190 | 83.7 | Plus |
| 3L | 28103327 | 3L | 25473028..25473110 | 1868..1950 | 190 | 81.9 | Plus |
| 3L | 28103327 | 3L | 24235483..24235565 | 1868..1950 | 190 | 81.9 | Plus |
| 3L | 28103327 | 3L | 25916034..25916131 | 1853..1950 | 190 | 79.5 | Plus |
| 3L | 28103327 | 3L | 24718779..24718846 | 1950..1883 | 190 | 85.2 | Minus |
| 3L | 28103327 | 3L | 23022091..23022170 | 1948..1869 | 190 | 82.5 | Minus |
| 3L | 28103327 | 3L | 24991935..24992017 | 1950..1868 | 190 | 81.9 | Minus |
| 2R | 25260384 | 2R | 4824047..4824093 | 1901..1947 | 190 | 93.6 | Plus |
| 2R | 25260384 | 2R | 6949671..6949735 | 1886..1950 | 190 | 86.1 | Plus |
| 2R | 25260384 | 2R | 4753127..4753194 | 1883..1950 | 190 | 85.2 | Plus |
| 2R | 25260384 | 2R | 3375029..3375108 | 1870..1949 | 190 | 82.5 | Plus |
| X | 23527363 | X | 14823669..14823727 | 1867..1925 | 190 | 88.1 | Plus |
| X | 23527363 | X | 23014192..23014265 | 1877..1950 | 190 | 83.7 | Plus |
| 2L | 23513712 | 2L | 21338688..21338743 | 1893..1948 | 190 | 89.2 | Plus |
| 2L | 23513712 | 2L | 22070468..22070529 | 1877..1938 | 190 | 87 | Plus |
| 2L | 23513712 | 2L | 22716670..22716737 | 1883..1950 | 190 | 85.2 | Plus |
| 2L | 23513712 | 2L | 22124338..22124405 | 1883..1950 | 190 | 85.2 | Plus |
| 2L | 23513712 | 2L | 22993245..22993318 | 1877..1950 | 190 | 83.7 | Plus |
| 2L | 23513712 | 2L | 22631504..22631577 | 1877..1950 | 190 | 83.7 | Plus |
| 2L | 23513712 | 2L | 21856864..21856937 | 1877..1950 | 190 | 83.7 | Plus |
| 2L | 23513712 | 2L | 22369955..22370010 | 1938..1883 | 190 | 89.2 | Minus |
| 2L | 23513712 | 2L | 21346953..21347014 | 1945..1884 | 190 | 87 | Minus |
| 2L | 23513712 | 2L | 18159651..18159715 | 1950..1886 | 190 | 86.1 | Minus |
| 2L | 23513712 | 2L | 22154427..22154493 | 1949..1885 | 190 | 88 | Minus |
| 2L | 23513712 | 2L | 22179071..22179153 | 1950..1868 | 190 | 81.9 | Minus |
| 2L | 23513712 | 2L | 21619397..21619479 | 1950..1868 | 190 | 81.9 | Minus |
| 2L | 23513712 | 2L | 21265225..21265307 | 1950..1868 | 190 | 81.9 | Minus |
| 3R | 31820162 | 3R | 31805168..31805247 | 1868..1947 | 190 | 82.5 | Plus |
| 3R | 31820162 | 3R | 687462..687529 | 1950..1883 | 190 | 85.2 | Minus |
| 3R | 31820162 | 3R | 3927464..3927534 | 1948..1878 | 190 | 84.5 | Minus |
| 3R | 31820162 | 3R | 2215108..2215181 | 1950..1877 | 190 | 83.7 | Minus |
| 3R | 31820162 | 3R | 31778584..31778666 | 1950..1868 | 190 | 81.9 | Minus |
| 3R | 31820162 | 3R | 3747467..3747549 | 1950..1868 | 190 | 81.9 | Minus |
| 4 | 1331231 | 4 | 1004996..1005063 | 1883..1950 | 190 | 85.2 | Plus |
| 4 | 1331231 | 4 | 944853..944923 | 1877..1947 | 190 | 84.5 | Plus |
| 4 | 1331231 | 4 | 535915..535991 | 1869..1945 | 190 | 83.1 | Plus |
| 4 | 1331231 | 4 | 451090..451151 | 1938..1877 | 190 | 87 | Minus |
| 4 | 1331231 | 4 | 602220..602301 | 1868..1949 | 170 | 80.4 | Plus |
| 4 | 1331231 | 4 | 602401..602435 | 1960..1994 | 145 | 94.2 | Plus |
Blast to na_te.dros performed 2019-03-15 15:52:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| INE-1 | 611 | INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). | 525..604 | 1944..1865 | 274 | 82.5 | Minus |
| McClintock | 6450 | McClintock McCLINTOCK 6450bp | 748..927 | 1679..1491 | 187 | 61.3 | Minus |
| Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 767..942 | 1619..1803 | 158 | 60 | Plus |
| Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1448..1617 | 1782..1616 | 149 | 59.2 | Minus |
| gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 5790..6036 | 1804..1549 | 134 | 57.4 | Minus |
| TAHRE | 10463 | TAHRE OSV 10463bp | 18..172 | 1674..1523 | 127 | 59.7 | Minus |
| R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 622..714 | 870..779 | 121 | 62.1 | Minus |
| pogo | 2121 | pogo DMPOGOR11 2121bp AKA(S90749) Derived from X59837 (g8354) (Rel. 45, Last updated, Version 10). | 1961..2047 | 1779..1693 | 119 | 65.6 | Minus |
LD21748.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:54:27 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3L | 9431931..9433836 | 106..2017 | 99 | <- | Minus |
| chr3L | 9433994..9434098 | 1..105 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:57:16 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3891-RA | 1..1200 | 180..1379 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:51:33 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nf-YA-RA | 1..1200 | 180..1379 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:44:41 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nf-YA-RA | 1..1200 | 180..1379 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:44:08 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3891-RA | 1..1200 | 180..1379 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:19:51 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nf-YA-RA | 1..1200 | 180..1379 | 100 | | Plus |
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:10:05 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:29:24 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3891-RA | 26..2041 | 1..2017 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:51:33 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nf-YA-RA | 26..2041 | 1..2017 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:44:41 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nf-YA-RA | 40..2055 | 1..2017 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:44:08 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3891-RA | 26..2041 | 1..2017 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:19:51 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nf-YA-RA | 40..2055 | 1..2017 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:27 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9440056..9441966 | 106..2017 | 99 | <- | Minus |
| 3L | 9442124..9442228 | 1..105 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:27 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9440056..9441966 | 106..2017 | 99 | <- | Minus |
| 3L | 9442124..9442228 | 1..105 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:27 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9440056..9441966 | 106..2017 | 99 | <- | Minus |
| 3L | 9442124..9442228 | 1..105 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:44:41 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9433156..9435066 | 106..2017 | 99 | <- | Minus |
| arm_3L | 9435224..9435328 | 1..105 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:16:30 Download gff for
LD21748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9433156..9435066 | 106..2017 | 99 | <- | Minus |
| 3L | 9435224..9435328 | 1..105 | 100 | | Minus |
LD21748.pep Sequence
Translation from 179 to 1378
> LD21748.pep
MENHFSATSRPSATPRMCTTASAVGAAASAAAAAGNNNNNSNSSSNNNAT
TGNNLSVSTAAGGATNAAATAQPIQVIPMPMLPTGAAQIIIGQQPQGQAT
ATGLQPQLIPLQANQIMLQAAQQQPQMQVMQLPDGQTIFYQTPTIAALDP
NAAANAAAAMAAQPTPHYLNINGQLVQINPAPSANQAAPTAGQQIIMVPQ
TAMAAVNAAAANAGVGAGVGTVVTQQQQQQHQQVQSQTQNQQQQQQQQTV
AAVAASAAVNNISADVSTSTTGTNTNSEDESSKGEADEEPLYVNAKQYKR
ILIRRQARAKLESRIPKERCKYLHESRHRHAMNRARGEGGRFHSAQEKGD
QDSSGPEGGSMPMASSGGVTLSRGTARAPPKLIAPHQTPSITITAIKSE*
LD21748.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:43:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\GF24667-PA | 353 | GF24667-PA | 19..350 | 48..399 | 1018 | 78.5 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:43:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG14038-PA | 378 | GG14038-PA | 36..378 | 55..399 | 1075 | 91 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:43:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgri\GH15528-PA | 359 | GH15528-PA | 55..359 | 101..399 | 810 | 71.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nf-YA-PA | 399 | CG3891-PA | 1..399 | 1..399 | 2001 | 100 | Plus |
| Hmx-PE | 592 | CG43748-PE | 170..439 | 1..289 | 165 | 25.9 | Plus |
| Hmx-PC | 592 | CG43748-PC | 170..439 | 1..289 | 165 | 25.9 | Plus |
| Hmx-PD | 718 | CG43748-PD | 170..439 | 1..289 | 165 | 25.9 | Plus |
| bun-PF | 1097 | CG42281-PM | 604..879 | 27..297 | 155 | 27.2 | Plus |
| bun-PP | 1137 | CG42281-PP | 604..879 | 27..297 | 155 | 27.2 | Plus |
| bun-PA | 1206 | CG42281-PK | 713..988 | 27..297 | 155 | 27.2 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:43:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmoj\GI16805-PA | 369 | GI16805-PA | 250..369 | 278..399 | 587 | 90.2 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:43:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpse\GA17755-PA | 360 | GA17755-PA | 24..360 | 53..399 | 1004 | 78.2 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:43:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\GJ12551-PA | 369 | GJ12551-PA | 21..369 | 51..399 | 934 | 75.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:43:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE21241-PA | 380 | GE21241-PA | 38..380 | 57..399 | 1180 | 94.2 | Plus |
LD21748.hyp Sequence
Translation from 179 to 1378
> LD21748.hyp
MENHFSATSRPSATPRMCTTASAVGAAASAAAAAGNNNNNSNSSSNNNAT
TGNNLSVSTAAGGATNAAATAQPIQVIPMPMLPTGAAQIIIGQQPQGQAT
ATGLQPQLIPLQANQIMLQAAQQQPQMQVMQLPDGQTIFYQTPTIAALDP
NAAANAAAAMAAQPTPHYLNINGQLVQINPAPSANQAAPTAGQQIIMVPQ
TAMAAVNAAAANAGVGAGVGTVVTQQQQQQHQQVQSQTQNQQQQQQQQTV
AAVAASAAVNNISADVSTSTTGTNTNSEDESSKGEADEEPLYVNAKQYKR
ILIRRQARAKLESRIPKERCKYLHESRHRHAMNRARGEGGRFHSAQEKGD
QDSSGPEGGSMPMASSGGVTLSRGTARAPPKLIAPHQTPSITITAIKSE*
LD21748.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:59:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nf-YA-PA | 399 | CG3891-PA | 1..399 | 1..399 | 2001 | 100 | Plus |
| Hmx-PE | 592 | CG43748-PE | 170..439 | 1..289 | 165 | 25.9 | Plus |
| Hmx-PC | 592 | CG43748-PC | 170..439 | 1..289 | 165 | 25.9 | Plus |
| Hmx-PD | 718 | CG43748-PD | 170..439 | 1..289 | 165 | 25.9 | Plus |
| bun-PF | 1097 | CG42281-PM | 604..879 | 27..297 | 155 | 27.2 | Plus |
