BDGP Sequence Production Resources |
Search the DGRC for LD21756
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 217 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | RpL4-RA |
Protein status: | LD21756.pep: gold |
Preliminary Size: | 1443 |
Sequenced Size: | 1386 |
Gene | Date | Evidence |
---|---|---|
CG5502 | 2001-01-01 | Release 2 assignment |
CG5502 | 2001-11-29 | Blastp of sequenced clone |
CG5502 | 2003-01-01 | Sim4 clustering to Release 3 |
RpL4 | 2008-04-29 | Release 5.5 accounting |
RpL4 | 2008-08-15 | Release 5.9 accounting |
RpL4 | 2008-12-18 | 5.12 accounting |
1386 bp (1386 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069485
> LD21756.complete AGGACGGTATCTGCGTTTGCAGAATATTTAGCACCTTTCATTGGGTTTGA AAATCAACGAAAATGAGCTTAGGCAACGCCAGGCCATTGGTCTCCGTGTA CACGGAAAAGAACGAGCCAGCCAAGGACAAGAACATATGCCTGCCGGCAG TGTTCAAGGCGCCCATTCGTCCGGATGTGGTCAACGAGGTTCACCAGCTG CTCCGCCGCAACAACCGACAGGCCTACGCCGTCAGCGAGCTGGCTGGTCA CCAGACCTCCGCCGAGTCCTGGGGTACCGGACGTGCTGTGGCCCGTATTC CCCGTGTGCGTGGTGGCGGTACCCACCGTTCCGGCCAGGGAGCCTTCGGC AACATGTGCCGTGGTGGACGCATGTTCGCCCCCACCAAGACGTTCCGTCG CTGGCACCGCAAGGTGAATGTCAACCAGCGTCGCTACGCCCTGGTGTCGG CCATCGCCGCCTCAGGAGTGCCAGCTCTGGTCCAGTCCAAGGGACATGTC ATCGACGGCGTCTCCGAGTTCCCGCTGGTCGTGTCCGATGAGGTGCAAAA GGTCCAGAAGACCAAGCAGGCTGTCATCTTCCTGCGTCGCCTGAAGATCT GGGCTGACATCCAGAAGGTGTACAAGTCGCAGCGCTTCCGTGCTGGCCGT GGTACCATGCGCGACCGTCGCCGCATCGCTCGCCGTGGTCCCCTGGTGGT CTACGACAAGGACGAGGGTCTGCGCAAGGCCTTCCGCAACATCCCCGGCA TTGAGACCATCAACGTGGACAAGCTCAATCTGCTGAAGCTGGCCCCCGGC GGTCATGTCGGTCGCTTTGTCATCTGGACCGAGTCGGCTTTCGCCCGCCT GAACGATCTGTTCGGCACCTGGAAGAAGCCGTCCACCTTGAAGAAGGGCT ACAACCTGCCCCAGCCCAAGATGGCCAACACCGATCTGTCGCGTCTGCTC AAGTCTGAGGAGATCCGCAAGGTGTTGCGCGATCCCCGCAAGCGTGTGTT CCGCAGCGTGCGCCGCCTGAACCCCCTGACCAACGTGCGCCAGCTGATCA AGCTTAACCCCTATGCCGAGGTCCTCAAGCGTCGTGCCGCCCTCGCCGCC GAGAAGCGCACCGTGGCCAAGGTGCTGGCCAAGGCCAAGAAGCAGAACGT CGAGCTGGCCAAGTCGCACTTCGCCAATGTGGCCACCAAGGCTGCGGCCA ATCGCGCCAAGCTGCTGGCCGCCCGCAAGAAGAAGGTCGCCGCCAAGAAG CCAGCGGCCAAGAAGTAAACTTACTTTCCCCCGAGTAGAGCTGACACACT TTTATATTATAATAAACCACAAAAGTTGTATGAATTTTATTCATAATACA TAGAGTGCGCGACAGTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 23747100..23747850 | 616..1366 | 3755 | 100 | Plus |
chr3R | 27901430 | chr3R | 23746331..23746705 | 246..620 | 1875 | 100 | Plus |
chr3R | 27901430 | chr3R | 23746086..23746269 | 65..248 | 905 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 23745817..23745881 | 1..65 | 325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 27924138..27924890 | 616..1368 | 3765 | 100 | Plus |
3R | 32079331 | 3R | 27923369..27923743 | 246..620 | 1875 | 100 | Plus |
3R | 32079331 | 3R | 27923124..27923307 | 65..248 | 920 | 100 | Plus |
3R | 32079331 | 3R | 27922855..27922919 | 1..65 | 325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 27664969..27665721 | 616..1368 | 3765 | 100 | Plus |
3R | 31820162 | 3R | 27664200..27664574 | 246..620 | 1875 | 100 | Plus |
3R | 31820162 | 3R | 27663955..27664138 | 65..248 | 920 | 100 | Plus |
3R | 31820162 | 3R | 27663686..27663750 | 1..65 | 325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 23745817..23745881 | 1..65 | 100 | -> | Plus |
chr3R | 23746087..23746267 | 66..246 | 99 | -> | Plus |
chr3R | 23746332..23746702 | 247..617 | 100 | -> | Plus |
chr3R | 23747102..23747850 | 618..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL4-RA | 1..1206 | 63..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL4-RA | 1..1206 | 63..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL4-RA | 1..1206 | 63..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL4-RA | 1..1206 | 63..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL4-RA | 1..1206 | 63..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL4-RA | 63..1428 | 1..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL4-RA | 63..1428 | 1..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL4-RA | 35..1400 | 1..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL4-RA | 63..1428 | 1..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL4-RA | 35..1400 | 1..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27922855..27922919 | 1..65 | 100 | -> | Plus |
3R | 27923125..27923305 | 66..246 | 100 | -> | Plus |
3R | 27923370..27923740 | 247..617 | 100 | -> | Plus |
3R | 27924140..27924888 | 618..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27922855..27922919 | 1..65 | 100 | -> | Plus |
3R | 27923125..27923305 | 66..246 | 100 | -> | Plus |
3R | 27923370..27923740 | 247..617 | 100 | -> | Plus |
3R | 27924140..27924888 | 618..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27922855..27922919 | 1..65 | 100 | -> | Plus |
3R | 27923125..27923305 | 66..246 | 100 | -> | Plus |
3R | 27923370..27923740 | 247..617 | 100 | -> | Plus |
3R | 27924140..27924888 | 618..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 23748577..23748641 | 1..65 | 100 | -> | Plus |
arm_3R | 23748847..23749027 | 66..246 | 100 | -> | Plus |
arm_3R | 23749092..23749462 | 247..617 | 100 | -> | Plus |
arm_3R | 23749862..23750610 | 618..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27664201..27664571 | 247..617 | 100 | -> | Plus |
3R | 27664971..27665719 | 618..1366 | 100 | Plus | |
3R | 27663686..27663750 | 1..65 | 100 | -> | Plus |
3R | 27663956..27664136 | 66..246 | 100 | -> | Plus |
Translation from 62 to 1267
> LD21756.pep MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRN NRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGV SEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVG RFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEE IRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRT VAKVLAKAKKQNVELAKSHFANVATKAAANRAKLLAARKKKVAAKKPAAK K*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18868-PA | 401 | GF18868-PA | 1..401 | 1..401 | 2033 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11580-PA | 401 | GG11580-PA | 1..401 | 1..401 | 2087 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18408-PA | 401 | GH18408-PA | 1..385 | 1..385 | 1949 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL4-PA | 401 | CG5502-PA | 1..401 | 1..401 | 2035 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24311-PA | 401 | GI24311-PA | 1..401 | 1..401 | 2049 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23641-PA | 401 | GL23641-PA | 1..401 | 1..401 | 2058 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18932-PA | 401 | GA18932-PA | 1..401 | 1..401 | 2051 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16362-PA | 411 | GM16362-PA | 1..411 | 1..401 | 1940 | 92.9 | Plus |
Dsec\GM24605-PA | 216 | GM24605-PA | 1..216 | 186..401 | 1088 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21356-PA | 401 | GD21356-PA | 1..401 | 1..401 | 2076 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10395-PA | 401 | GJ10395-PA | 1..401 | 1..401 | 2031 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12825-PA | 427 | GK12825-PA | 28..427 | 2..401 | 2033 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RpL4-PA | 401 | GE23769-PA | 1..401 | 1..401 | 2087 | 99.8 | Plus |
Translation from 62 to 1267
> LD21756.hyp MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRN NRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGV SEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVG RFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEE IRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRT VAKVLAKAKKQNVELAKSHFANVATKAAANRAKLLAARKKKVAAKKPAAK K*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL4-PA | 401 | CG5502-PA | 1..401 | 1..401 | 2035 | 100 | Plus |