BDGP Sequence Production Resources |
Search the DGRC for LD21768
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 217 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | Mppe-RA |
Protein status: | LD21768.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1743 |
Gene | Date | Evidence |
---|---|---|
CG8889 | 2001-01-01 | Release 2 assignment |
CG8889 | 2002-06-10 | Blastp of sequenced clone |
CG8889 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8889 | 2008-04-29 | Release 5.5 accounting |
CG8889 | 2008-08-15 | Release 5.9 accounting |
CG8889 | 2008-12-18 | 5.12 accounting |
1743 bp (1743 high quality bases) assembled on 2002-06-10
GenBank Submission: AY069486
> LD21768.complete CGCAAGAAGTGCAAACATAGGATAAAGATAATTGCACAATTATTGGCACC TGGAGCCGGCAAACGCTGTAACGGAATTGCCCGCGTTCAAAAGCCAATGG CGCGCATTGGCGAAACATCGGAGGAATGTGGTAATGGACGCAACACAACG TTCCGGCCGTTCTAGATGTTTTGCTTTCTAATCCAATTAAGCGTGTGCGC CCTGAAAGCGATGATGCGGGCCGGTTGTGGTCAGATGTGCGCCGTCCGTT GCAGCAGCTCTACATTCCCGAAAATATGAGCATTCTTACGTAAATATTGC ATGGGCAGTGCGTATTTAAATATAGATTGTACATATAGAGACGCAATGTA AGCCAGTTGCATTTGCCAGAGGACAACCGAAAGTATTAATCAAGCAATCC AAACCGATGCGGCATAGCCGGGATTATGGCTTCCTTGCGCGTCGTCAATA GATTAGTGTGCCGCGGTTTTGTGGCTCTTACGTTGCTGCTGGTCTTCTTC AACGAGTTTATAGTTTACTACATGGCCCAGTCCAGTTGGCAGCCAATCGA TTGCAAACTAGATAATTGCACGCGCCTGCTGCTTATTGCTGATCCCCAGA TACTGGGAAACTCCTACGATCGATCTTCGCACAGTCCTTTAGCCAGGTAC GATTCGGATAGATACCTGGCGAAGACTTTCGAGCGAGCTCTTGCCTTTAC ACAGCCTCACATCATAGTGTTCCTGGGCGATCTGTTGGACGAAGGCAACA TTGCCACGGCTCAAGAGTACAAGCAGTACGTTCAGCGGTTCAGACGAATT TATCAGAATAAGAACTACAAAAAACGCGTCCATGTGCCGGGTGACAATGA TATTGGCGGCGAGAATGGCGACTACATATCCAACTCGAACCAAAGACGCT TTGAGAACGAATTCATGAGTGAAGACCTCTTTGACTATGACAATCGATTA CGCTTCTTCAAGATAAACCGCATGCTATTGGACTTTAGCAACCCGGATAG GGATAACAATGCGGATCGTCTAAGAATTGGCGTATCCCATGCCCCGCTGC TCATTGGCGGAGGACCCCTGTTGAGAGCCATCATCAGCGACTTGGATCCA CATATCATTTTCTCAGGACACTGGCATGAATCCAGAATATTTATTTACCC CTCCACCAAGGTGATCAACTTTTATGAAAACTCCGTGAGGCATTTTGACT TGAAGGCCCTCAAAGAGCAGGAGCACAGCTATCTGGAGATAATGGTGCCC ACTTGCTCGTATCGCATGGGAAAGTCCAAGATCGGATTGGGCTACGCGGT TTTGGAAAACTACAATCTGAGCTACACGGTGCTGTGGCAGCCAAATCGAT TTATCCTGCTCTTCACCTATGTTTTTTGGGGACTATTCGTCGTCTGTGGT TTCGTCGTCTTTAAGATGATGACACGTTGTCCCTTCCGCGTGGCCAAAAG GCAGACGCTCTATAACCGCGTCTCGACTATACCGCAATTTTAGACTGCAC TTTCCACTCGTCATGGACAATAAGCCCAAGATTCTCAAGAATTGCTCGAA TATACAACTCAAAATTGAATTAAAATCGTATTTATAGACAAGTAGCTTAT ATTCGGATAAAGTTGAGTAGTAGCAATGAAAATTGATATAAAGTGCTAAA TTTGTTTTCCAATAAGTGAAAAAATGTAACCAATGTCCTCCATCCATATT CATTAAAAAATTTAATTTAATTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8889-RA | 2082 | CG8889-RA | 268..1992 | 1..1725 | 8625 | 100 | Plus |
CG8889-RB | 1990 | CG8889-RB | 650..1925 | 450..1725 | 6380 | 100 | Plus |
CG8889.a | 850 | CG8889.a | 16..661 | 1..646 | 3230 | 100 | Plus |
CG8889-RB | 1990 | CG8889-RB | 195..646 | 1..452 | 2260 | 100 | Plus |
CG8889.a | 850 | CG8889.a | 651..781 | 694..824 | 625 | 98.4 | Plus |
CG8889.a | 850 | CG8889.a | 809..850 | 825..866 | 210 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7913314..7913794 | 1305..825 | 2375 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 7914445..7914895 | 451..1 | 2255 | 100 | Minus |
chr2R | 21145070 | chr2R | 7912837..7913254 | 1723..1305 | 2000 | 99 | Minus |
chr2R | 21145070 | chr2R | 7913945..7914210 | 824..559 | 1330 | 100 | Minus |
chr2R | 21145070 | chr2R | 7914260..7914375 | 565..450 | 565 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12026092..12026572 | 1305..825 | 2405 | 100 | Minus |
2R | 25286936 | 2R | 12027223..12027673 | 451..1 | 2255 | 100 | Minus |
2R | 25286936 | 2R | 12025612..12026032 | 1725..1305 | 2105 | 100 | Minus |
2R | 25286936 | 2R | 12026723..12026988 | 824..559 | 1330 | 100 | Minus |
2R | 25286936 | 2R | 12027038..12027153 | 565..450 | 565 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12027291..12027771 | 1305..825 | 2405 | 100 | Minus |
2R | 25260384 | 2R | 12028422..12028872 | 451..1 | 2255 | 100 | Minus |
2R | 25260384 | 2R | 12026811..12027231 | 1725..1305 | 2105 | 100 | Minus |
2R | 25260384 | 2R | 12027922..12028187 | 824..559 | 1330 | 100 | Minus |
2R | 25260384 | 2R | 12028237..12028352 | 565..450 | 565 | 99.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7912857..7913253 | 1306..1702 | 99 | <- | Minus |
chr2R | 7913314..7913794 | 825..1305 | 99 | <- | Minus |
chr2R | 7913945..7914207 | 562..824 | 100 | <- | Minus |
chr2R | 7914264..7914373 | 452..561 | 100 | <- | Minus |
chr2R | 7914445..7914895 | 1..451 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8889-RA | 1..1068 | 426..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8889-RA | 1..1068 | 426..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mppe-RA | 1..1068 | 426..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8889-RA | 1..1068 | 426..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mppe-RA | 1..1068 | 426..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8889-RA | 16..1738 | 1..1723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8889-RA | 16..1738 | 1..1723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mppe-RA | 35..1757 | 1..1723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8889-RA | 16..1738 | 1..1723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mppe-RA | 35..1757 | 1..1723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12025614..12026031 | 1306..1723 | 100 | <- | Minus |
2R | 12026092..12026572 | 825..1305 | 100 | <- | Minus |
2R | 12026723..12026985 | 562..824 | 100 | <- | Minus |
2R | 12027042..12027151 | 452..561 | 100 | <- | Minus |
2R | 12027223..12027673 | 1..451 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12025614..12026031 | 1306..1723 | 100 | <- | Minus |
2R | 12026092..12026572 | 825..1305 | 100 | <- | Minus |
2R | 12026723..12026985 | 562..824 | 100 | <- | Minus |
2R | 12027042..12027151 | 452..561 | 100 | <- | Minus |
2R | 12027223..12027673 | 1..451 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12025614..12026031 | 1306..1723 | 100 | <- | Minus |
2R | 12026092..12026572 | 825..1305 | 100 | <- | Minus |
2R | 12026723..12026985 | 562..824 | 100 | <- | Minus |
2R | 12027042..12027151 | 452..561 | 100 | <- | Minus |
2R | 12027223..12027673 | 1..451 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7913119..7913536 | 1306..1723 | 100 | <- | Minus |
arm_2R | 7913597..7914077 | 825..1305 | 100 | <- | Minus |
arm_2R | 7914228..7914490 | 562..824 | 100 | <- | Minus |
arm_2R | 7914547..7914656 | 452..561 | 100 | <- | Minus |
arm_2R | 7914728..7915178 | 1..451 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12028241..12028350 | 452..561 | 100 | <- | Minus |
2R | 12027922..12028184 | 562..824 | 100 | <- | Minus |
2R | 12026813..12027230 | 1306..1723 | 100 | <- | Minus |
2R | 12027291..12027771 | 825..1305 | 100 | <- | Minus |
2R | 12028422..12028872 | 1..451 | 100 | Minus |
Translation from 425 to 1492
> LD21768.pep MASLRVVNRLVCRGFVALTLLLVFFNEFIVYYMAQSSWQPIDCKLDNCTR LLLIADPQILGNSYDRSSHSPLARYDSDRYLAKTFERALAFTQPHIIVFL GDLLDEGNIATAQEYKQYVQRFRRIYQNKNYKKRVHVPGDNDIGGENGDY ISNSNQRRFENEFMSEDLFDYDNRLRFFKINRMLLDFSNPDRDNNADRLR IGVSHAPLLIGGGPLLRAIISDLDPHIIFSGHWHESRIFIYPSTKVINFY ENSVRHFDLKALKEQEHSYLEIMVPTCSYRMGKSKIGLGYAVLENYNLSY TVLWQPNRFILLFTYVFWGLFVVCGFVVFKMMTRCPFRVAKRQTLYNRVS TIPQF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12647-PA | 355 | GF12647-PA | 1..355 | 1..355 | 1799 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22612-PA | 357 | GG22612-PA | 1..357 | 1..355 | 1886 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21045-PA | 355 | GH21045-PA | 1..355 | 1..355 | 1747 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mppe-PA | 355 | CG8889-PA | 1..355 | 1..355 | 1882 | 100 | Plus |
Mppe-PB | 357 | CG8889-PB | 1..357 | 1..355 | 1869 | 99.4 | Plus |
Mppe-PD | 364 | CG8889-PD | 1..364 | 1..355 | 1862 | 97.5 | Plus |
Mppe-PE | 366 | CG8889-PE | 1..366 | 1..355 | 1849 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18647-PA | 355 | GI18647-PA | 1..351 | 1..351 | 1551 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11542-PA | 355 | GL11542-PA | 1..355 | 1..355 | 1783 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21393-PA | 355 | GA21393-PA | 1..355 | 1..355 | 1791 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20391-PA | 357 | GM20391-PA | 1..357 | 1..355 | 1891 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25866-PA | 355 | GD25866-PA | 1..355 | 1..355 | 1903 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21663-PA | 355 | GJ21663-PA | 1..355 | 1..355 | 1721 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21981-PA | 356 | GK21981-PA | 1..356 | 1..355 | 1739 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13480-PA | 357 | GE13480-PA | 1..357 | 1..355 | 1886 | 98.9 | Plus |
Translation from 425 to 1492
> LD21768.hyp MASLRVVNRLVCRGFVALTLLLVFFNEFIVYYMAQSSWQPIDCKLDNCTR LLLIADPQILGNSYDRSSHSPLARYDSDRYLAKTFERALAFTQPHIIVFL GDLLDEGNIATAQEYKQYVQRFRRIYQNKNYKKRVHVPGDNDIGGENGDY ISNSNQRRFENEFMSEDLFDYDNRLRFFKINRMLLDFSNPDRDNNADRLR IGVSHAPLLIGGGPLLRAIISDLDPHIIFSGHWHESRIFIYPSTKVINFY ENSVRHFDLKALKEQEHSYLEIMVPTCSYRMGKSKIGLGYAVLENYNLSY TVLWQPNRFILLFTYVFWGLFVVCGFVVFKMMTRCPFRVAKRQTLYNRVS TIPQF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mppe-PA | 355 | CG8889-PA | 1..355 | 1..355 | 1882 | 100 | Plus |
Mppe-PB | 357 | CG8889-PB | 1..357 | 1..355 | 1869 | 99.4 | Plus |
Mppe-PD | 364 | CG8889-PD | 1..364 | 1..355 | 1862 | 97.5 | Plus |
Mppe-PE | 366 | CG8889-PE | 1..366 | 1..355 | 1849 | 97 | Plus |