Clone LD21772 Report

Search the DGRC for LD21772

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:217
Well:72
Vector:pOT2
Associated Gene/TranscriptNup154-RA
Protein status:LD21772.pep: gold
Preliminary Size:5052
Sequenced Size:4356

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4579 2000-02-14 Blastp of sequenced clone
CG4579 2001-01-01 Release 2 assignment
CG4579 2003-01-01 Sim4 clustering to Release 3
Nup154 2008-04-29 Release 5.5 accounting
Nup154 2008-08-15 Release 5.9 accounting
Nup154 2008-12-18 5.12 accounting

Clone Sequence Records

LD21772.complete Sequence

4356 bp (4356 high quality bases) assembled on 2000-02-14

GenBank Submission: AF160944

> LD21772.complete
TACATTGAGCATCAGTCGACCAAATCTTCAGATTAGTTTGTAGTTTCATC
CCAAAACAGTGGTCTGACGGCATTTTAAGTTAGCATTGCACCCGAGTTAG
CCCGCCTCATCACAGTTTTCAGCACGATGACTCTTCCGCAAGCACAGCTG
GACTTTTTCACGACGGCGACCAGTATGCTGGAATGGCATTACAATCTGGA
GAGAAATAAGCCGGGTCTGCTGGAACTGACCGGCGTTAGCCAGCATGGGC
GGGCCACGATGAGCGGACTTAATGACTACGATTACCAGAGCCTGTCGTTT
TTGAAATCGGATAGAACACATAACCTACAACAAATGCGAACGGTGACCAA
GTCGGCTATTCCCAACGAGATTCTGGAGCACTTTAAGCACATAAAATGCC
ACTGCACCATGGGCCTCTTTCCGGAAATCGGACGTGCCTGGCTGACTATC
GATTCGGAAATCTACATCTGGACGTTCAATCAGACGAGGGATGTGGCGTA
CTACGATGGCCTCAGTCATCTGATCGTAAGCGTTGGCCTGGTGAAACCAA
AACCCGGCGTCTTTGTGCAGGACGTCAAGTACCTCCTGGTTCTCACTACG
CCCATTGAGGTCATTGTCCTGGGCGTGACATTCGGTGAGAGCTCGTACAA
CGAAATGCAGCTGATGAACCGGCCAGTTTTTGTGATTGGTACCGACAACG
TGTCCATCAGCGTCATCAAAGGAACGGATGACGGCCGCATCTTTTTGGGC
GGTCGCGATGGCTGCCTCTATGAAATTTACTATCAGGCCGAGTCCAGTTG
GTTTGGCAAGCGATGCAAGAAAATAAATCTCTCCCAAGGACTGGTCTCCT
ATATGGTTCCCAGTTTTTTGAAGGTCTTTTCGGAAGTGGATCCAATCGAA
CACATTGAGATCGATAACAGTCGCAAGCTTCTCTATGTCCTTACGGAAAA
AGGTGTCATTGAGGCTTGGGACATCAGTACGAGTTACACGACAGCTCGAA
GACTAGGTCGGATTACCCAGAACGATATTACGAATCAAGCAGTTAGTCTG
ATCACGACTGTGGACCCGTCCATTTTTAAAAGTGTGAAAGCCATCTGCCC
TCTGAGCGCCGACGATGCCGACAAACTACATCTTGTGGCCGTTACTCAGT
GTGGTGTGCGGCTCTTTTTCTCCACAACATCGCTAAATGTGAAGCAACAA
TTTGGTCCCGCGGTTCCTTGCAGTCCAGGTGAGAATACAGGATTCGGTCA
GCCAGCAGTTCAGCCACCACTGTCTCCAAATGCTGAGGCTCCTAAGGGAC
TTTATCTGCTCCACGTGCGTCTACCACCCGGCTACACCCCAAATGCCACC
ACCAACAAACCAAAGCAGGTCCATGCCGCTCACTACACGGAGGGAACCAT
GTTGATGATCACAACGCAACAGCATGAACAGGATCTCCTCTGGTCGCTCA
GCTCTGCCCCATCGGTTAACTTTACCTACCTGGTGGAGTCGACGGCTCTG
GAGAGCCTGGATGGAGTTGTTTGGGGATTGGCTGAGGTACATGAACCGTC
GACGCCACAACGAAAGTCACCCTTAAATAGTGCCCGACACGCCCGCAAAG
TAGCCCTGCTCACCAACCAAGGCACACATATCATAGAGGTGCTTAAAATG
GTGGACGTACTGCGTCAGATCCTTCTGTCGTGCAATGGCCCACACCACGA
GGAGGTGAAGATGTTCTTCCAGTCGCAGAATCAGCGAGAGGCATGTGTCA
CGGCTCTGCTGCTGGCCACATCGGATACTTATCGTGGCAGTGACGTTGCT
TTGTGGGCCGCCCAGGCGTTTATGCTGTACGGCGGAGAGCCATGCTATCA
GCATCAAAAGTTCCTGAACGCCAGCAACCGCAATATGGCTAATCAAACTC
TAGGCCCGAATACGACGAATGTAAGGGAGCGTCAATCCATGTTTATGTCC
ACGCCAATGCCGAATAGCGTGGCAAATAGTCCGGTTGGTTTTCCTGGATC
GCAGTTCAATCAGCCCATAAGTCCAATTGGAAATATGCAGCCACCACAGG
TGGCAGTTAGTAACGAGAATTCCCCAATCGTTTTCTCGGCCAAACACGAC
GGACTTTACATGTATGTCTCCCGCATGCTGCATTCTGTTTGGCAAATGCG
CTGTGTAAATGAGCAATTTTGCTCTAATCTAAGTCAGAGTGAGTGTGCCC
TCTTGCTATCCGATCTGCGTTCCCTGCGTAGCTTTCTGGAAGTGCACTCT
GTGCACGATATTTCCTCGACTACTCGAGTGTCATTTGATAACCATTTGGA
TAGAACCAATTCATATAACACCATCATGATGGGCAACACTTTGCTGCCAA
TTCCTGAGCAACGCGTATTGTCCGAGCAGGCTCAAGTAGAGGAAACACGT
TCGCTTTCCGCTCTCAACCTATTTGTCAAACATGCATGTGAGGTTATATC
GCTGTGGAACATCCTAAACTCGCATTCCTTCCAGCTGATATGCGTGCAAC
TCAGTCCGGAACATCAGAAGTTGTTGACATGCTCCACCTTCCGGGATCTT
CTGATTACACGTTCAGAGGTCTGCGCATTCTTGATCATCTCGCTGATCAA
TCTGTATCTGAAGGACGCGGCGGGAGTGTCTGAAGTGTCCAAGAACTTAC
GTGAGAACTGCCCCAACCTATACAGGCATGAGGATGACGTGACCTACAAG
GCCACCGAGTTGTTGATGAATGCAAAGAATTGCACTTCGGCAACCGAAAA
GGAACATATGCTGCGAACCACCCTGCATATGTGCAAGGAAGCTGCTCCCA
CATTGCCACTGCATAGTATTTGCATGCAATTCATATCGGCTGACTTCTTT
GAGGGAGTGATCGAGCTTTCGGCTGTTTGTGCCTCAAAAAGTGATCCAGA
GGAGGTTGGTGTTCATTTCTATAACAATGGGGAACCCGCCGATGATCGCG
AGGGTTACACTTGCTTTGCCACAAGGATGGCCTACTACAAGGAAGTGCAA
CTTATGCTGGACCATATCTACCAGAGAGTATGCAACAAGACGCACGTTCA
GGATAAGTCTATAAATCCACTTAAAGGTACGGCTAAAGCGTCCGATGCAA
AAAACGGTGCTACGCAAACGATTCCAAAAATAGTGGCCCATACCCTAAAG
GTGAAAGACCCGCTCATTCATATAACGCTCTACGAATGGCTGCTGGCCCA
CGACATGCTCAAAGAGCTTTTAGACGTGGTTGAGCCGTCATTAGGAGAGT
TCTTGCGGCGCAGTGTGTCGCAAAATGTAGATAATGTCGTTCTTATCGAT
TTGCTGTGGAAGTACTACGAAAAGAATAGCCATCATTCCCAGGCAGCCCA
TATATTGGACAATTTGGCTATGACACGCAGTGAAAACATTAATCTGGAGC
AGCGCATTGAGTACTTGGTGCGTGCTGTTATGTGTATGCGAAATGGTAAC
GTTGGCTCTTCATTAAGCAATGGAATATTCCTGAAAGAGCTAGAGGATAA
GCTGGACATCGCACGAGTTCAAAAATCAGTGCTTGCCGCGATGACAGAGT
TGGCTAGCGATAAGCTGGAGGCAGCTACGGCTGTTAAGGAACTAAACTAT
GCGTTGTACGACATAACTCAGCTATACCAGCACTTTGCGGAGCCCTTCGA
CCTTTGGGAGTGCCAATTGTCCATACTCAACTGCTCGCATCACAACGACC
CCCTACTGATCGAGTCCGTTTGGGGCCAGATTATCAACAGCGTTGTGGAT
AAGCCGGGCACAACTAGTGAGCGCTGCAATAGGTTATTCACGAAAATCGA
AATCTTGGTAAGGGAGTATGGCGAGTCTGGAGTTTGCTTTCCCTTTGCCT
TTCTCATAAGGGAACTGGAAGTTAAAGCCTGCCAACTGCGATTTCCCGAG
GGCATAGTGCCGGAAAAACTGGTGAGTATGAATTTGGACATTGAACTGCT
CCTGGAATACTATTCGAGAATGATTTCAATGAACGAACGAGTGTGGGCCA
ACGAGGGTAATGAGTGGCATTTAATACAATCCGTCATACGAGTGGTCTCG
CTTCTGGCAGACAACGCACAATCTATTTGGTACCGGTCAAAACGACGAAT
TGTTGGCAAGGCTCAAGACATAGTGGCCGGCTGCCTGAATATTTGCTACC
AAAAGCCCGACACTAATCGTCTTCAACATTCACTCAAGGAACTTCAGAGT
CAGCTGCAGCGGTTGTTGATTTAAAGCCGTCGGCCTGCGTTATTTTAATT
AAATTTTTGAAAGTGCTGGACTAGACGTTAAGTTTGACTGAGATATATAT
TGTATTTGTATTAAACATGTTAAATAAATTGATTTCCAAAAAAAAAAAAA
AAAAAA

LD21772.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:43:09
Subject Length Description Subject Range Query Range Score Percent Strand
Nup154-RA 4577 Nup154-RA 169..4505 1..4337 21685 100 Plus
Nup154.a 4766 Nup154.a 169..4444 1..4276 21380 100 Plus
Nup154-RB 4328 Nup154-RB 782..4322 797..4337 17705 100 Plus
Nup154-RB 4328 Nup154-RB 32..782 1..751 3755 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:49:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 11004918..11005888 1056..2026 4855 100 Plus
chr2L 23010047 chr2L 11006471..11007018 2429..2976 2740 100 Plus
chr2L 23010047 chr2L 11007074..11007601 2974..3501 2640 100 Plus
chr2L 23010047 chr2L 11004124..11004618 389..883 2475 100 Plus
chr2L 23010047 chr2L 11007665..11008133 3500..3968 2345 100 Plus
chr2L 23010047 chr2L 11008383..11008628 4092..4337 1230 100 Plus
chr2L 23010047 chr2L 11005948..11006187 2027..2266 1200 100 Plus
chr2L 23010047 chr2L 11003610..11003834 1..225 1125 100 Plus
chr2L 23010047 chr2L 11004676..11004850 882..1056 875 100 Plus
chr2L 23010047 chr2L 11003895..11004057 226..388 815 100 Plus
chr2L 23010047 chr2L 11006251..11006412 2267..2428 810 100 Plus
chr2L 23010047 chr2L 11008197..11008321 3967..4091 625 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:10:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:49:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11006162..11007132 1056..2026 4855 100 Plus
2L 23513712 2L 11007715..11008262 2429..2976 2740 100 Plus
2L 23513712 2L 11008318..11008845 2974..3501 2640 100 Plus
2L 23513712 2L 11005368..11005862 389..883 2475 100 Plus
2L 23513712 2L 11008909..11009377 3500..3968 2345 100 Plus
2L 23513712 2L 11009627..11009872 4092..4337 1230 100 Plus
2L 23513712 2L 11007192..11007431 2027..2266 1200 100 Plus
2L 23513712 2L 11004854..11005078 1..225 1125 100 Plus
2L 23513712 2L 11005920..11006094 882..1056 875 100 Plus
2L 23513712 2L 11005139..11005301 226..388 815 100 Plus
2L 23513712 2L 11007495..11007656 2267..2428 810 100 Plus
2L 23513712 2L 11009441..11009565 3967..4091 625 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:04:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11006162..11007132 1056..2026 4855 100 Plus
2L 23513712 2L 11007715..11008262 2429..2976 2740 100 Plus
2L 23513712 2L 11008318..11008845 2974..3501 2640 100 Plus
2L 23513712 2L 11005368..11005862 389..883 2475 100 Plus
2L 23513712 2L 11008909..11009377 3500..3968 2345 100 Plus
2L 23513712 2L 11009627..11009872 4092..4337 1230 100 Plus
2L 23513712 2L 11007192..11007431 2027..2266 1200 100 Plus
2L 23513712 2L 11004854..11005078 1..225 1125 100 Plus
2L 23513712 2L 11005920..11006094 882..1056 875 100 Plus
2L 23513712 2L 11005139..11005301 226..388 815 100 Plus
2L 23513712 2L 11007495..11007656 2267..2428 810 100 Plus
2L 23513712 2L 11009441..11009565 3967..4091 625 100 Plus
Blast to na_te.dros performed on 2019-03-16 21:49:26 has no hits.

LD21772.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:50:31 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 11003610..11003834 1..225 100 -> Plus
chr2L 11003895..11004057 226..388 100 -> Plus
chr2L 11004124..11004617 389..882 100 -> Plus
chr2L 11004677..11004849 883..1055 100 -> Plus
chr2L 11004918..11005888 1056..2026 100 -> Plus
chr2L 11005948..11006187 2027..2266 100 -> Plus
chr2L 11006251..11006412 2267..2428 100 -> Plus
chr2L 11006471..11007017 2429..2975 100 -> Plus
chr2L 11007076..11007601 2976..3501 100 -> Plus
chr2L 11007667..11008133 3502..3968 100 -> Plus
chr2L 11008199..11008321 3969..4091 100 -> Plus
chr2L 11008383..11008628 4092..4337 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:57:21 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
Nup154-RA 1..4098 127..4224 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:36:33 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
Nup154-RA 1..4098 127..4224 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:05:37 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
Nup154-RA 1..4098 127..4224 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:12:32 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
Nup154-RA 1..4098 127..4224 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:32:32 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
Nup154-RA 1..4098 127..4224 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:39:56 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
Nup154-RA 32..4368 1..4337 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:36:33 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
Nup154-RA 32..4368 1..4337 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:05:37 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
Nup154-RA 35..4371 1..4337 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:12:32 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
Nup154-RA 32..4368 1..4337 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:32:32 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
Nup154-RA 35..4371 1..4337 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:50:31 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11004854..11005078 1..225 100 -> Plus
2L 11005139..11005301 226..388 100 -> Plus
2L 11005368..11005861 389..882 100 -> Plus
2L 11005921..11006093 883..1055 100 -> Plus
2L 11006162..11007132 1056..2026 100 -> Plus
2L 11007192..11007431 2027..2266 100 -> Plus
2L 11007495..11007656 2267..2428 100 -> Plus
2L 11007715..11008261 2429..2975 100 -> Plus
2L 11008320..11008845 2976..3501 100 -> Plus
2L 11008911..11009377 3502..3968 100 -> Plus
2L 11009443..11009565 3969..4091 100 -> Plus
2L 11009627..11009872 4092..4337 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:50:31 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11004854..11005078 1..225 100 -> Plus
2L 11005139..11005301 226..388 100 -> Plus
2L 11005368..11005861 389..882 100 -> Plus
2L 11005921..11006093 883..1055 100 -> Plus
2L 11006162..11007132 1056..2026 100 -> Plus
2L 11007192..11007431 2027..2266 100 -> Plus
2L 11007495..11007656 2267..2428 100 -> Plus
2L 11007715..11008261 2429..2975 100 -> Plus
2L 11008320..11008845 2976..3501 100 -> Plus
2L 11008911..11009377 3502..3968 100 -> Plus
2L 11009443..11009565 3969..4091 100 -> Plus
2L 11009627..11009872 4092..4337 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:50:31 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11004854..11005078 1..225 100 -> Plus
2L 11005139..11005301 226..388 100 -> Plus
2L 11005368..11005861 389..882 100 -> Plus
2L 11005921..11006093 883..1055 100 -> Plus
2L 11006162..11007132 1056..2026 100 -> Plus
2L 11007192..11007431 2027..2266 100 -> Plus
2L 11007495..11007656 2267..2428 100 -> Plus
2L 11007715..11008261 2429..2975 100 -> Plus
2L 11008320..11008845 2976..3501 100 -> Plus
2L 11008911..11009377 3502..3968 100 -> Plus
2L 11009443..11009565 3969..4091 100 -> Plus
2L 11009627..11009872 4092..4337 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:05:37 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11005139..11005301 226..388 100 -> Plus
arm_2L 11004854..11005078 1..225 100 -> Plus
arm_2L 11005368..11005861 389..882 100 -> Plus
arm_2L 11005921..11006093 883..1055 100 -> Plus
arm_2L 11006162..11007132 1056..2026 100 -> Plus
arm_2L 11007192..11007431 2027..2266 100 -> Plus
arm_2L 11007495..11007656 2267..2428 100 -> Plus
arm_2L 11007715..11008261 2429..2975 100 -> Plus
arm_2L 11008320..11008845 2976..3501 100 -> Plus
arm_2L 11008911..11009377 3502..3968 100 -> Plus
arm_2L 11009443..11009565 3969..4091 100 -> Plus
arm_2L 11009627..11009872 4092..4337 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:49:01 Download gff for LD21772.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11009443..11009565 3969..4091 100 -> Plus
2L 11009627..11009872 4092..4337 100   Plus
2L 11004854..11005078 1..225 100 -> Plus
2L 11005139..11005301 226..388 100 -> Plus
2L 11005368..11005861 389..882 100 -> Plus
2L 11005921..11006093 883..1055 100 -> Plus
2L 11006162..11007132 1056..2026 100 -> Plus
2L 11007192..11007431 2027..2266 100 -> Plus
2L 11007495..11007656 2267..2428 100 -> Plus
2L 11007715..11008261 2429..2975 100 -> Plus
2L 11008320..11008845 2976..3501 100 -> Plus
2L 11008911..11009377 3502..3968 100 -> Plus

LD21772.pep Sequence

Translation from 126 to 4223

> LD21772.pep
MTLPQAQLDFFTTATSMLEWHYNLERNKPGLLELTGVSQHGRATMSGLND
YDYQSLSFLKSDRTHNLQQMRTVTKSAIPNEILEHFKHIKCHCTMGLFPE
IGRAWLTIDSEIYIWTFNQTRDVAYYDGLSHLIVSVGLVKPKPGVFVQDV
KYLLVLTTPIEVIVLGVTFGESSYNEMQLMNRPVFVIGTDNVSISVIKGT
DDGRIFLGGRDGCLYEIYYQAESSWFGKRCKKINLSQGLVSYMVPSFLKV
FSEVDPIEHIEIDNSRKLLYVLTEKGVIEAWDISTSYTTARRLGRITQND
ITNQAVSLITTVDPSIFKSVKAICPLSADDADKLHLVAVTQCGVRLFFST
TSLNVKQQFGPAVPCSPGENTGFGQPAVQPPLSPNAEAPKGLYLLHVRLP
PGYTPNATTNKPKQVHAAHYTEGTMLMITTQQHEQDLLWSLSSAPSVNFT
YLVESTALESLDGVVWGLAEVHEPSTPQRKSPLNSARHARKVALLTNQGT
HIIEVLKMVDVLRQILLSCNGPHHEEVKMFFQSQNQREACVTALLLATSD
TYRGSDVALWAAQAFMLYGGEPCYQHQKFLNASNRNMANQTLGPNTTNVR
ERQSMFMSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSP
IVFSAKHDGLYMYVSRMLHSVWQMRCVNEQFCSNLSQSECALLLSDLRSL
RSFLEVHSVHDISSTTRVSFDNHLDRTNSYNTIMMGNTLLPIPEQRVLSE
QAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLL
TCSTFRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYR
HEDDVTYKATELLMNAKNCTSATEKEHMLRTTLHMCKEAAPTLPLHSICM
QFISADFFEGVIELSAVCASKSDPEEVGVHFYNNGEPADDREGYTCFATR
MAYYKEVQLMLDHIYQRVCNKTHVQDKSINPLKGTAKASDAKNGATQTIP
KIVAHTLKVKDPLIHITLYEWLLAHDMLKELLDVVEPSLGEFLRRSVSQN
VDNVVLIDLLWKYYEKNSHHSQAAHILDNLAMTRSENINLEQRIEYLVRA
VMCMRNGNVGSSLSNGIFLKELEDKLDIARVQKSVLAAMTELASDKLEAA
TAVKELNYALYDITQLYQHFAEPFDLWECQLSILNCSHHNDPLLIESVWG
QIINSVVDKPGTTSERCNRLFTKIEILVREYGESGVCFPFAFLIRELEVK
ACQLRFPEGIVPEKLVSMNLDIELLLEYYSRMISMNERVWANEGNEWHLI
QSVIRVVSLLADNAQSIWYRSKRRIVGKAQDIVAGCLNICYQKPDTNRLQ
HSLKELQSQLQRLLI*

LD21772.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15841-PA 1363 GF15841-PA 1..1363 1..1365 5873 79.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:16:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23693-PA 1364 GG23693-PA 1..1364 1..1365 6779 92 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:16:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13295-PA 1341 GH13295-PA 9..1340 9..1364 4981 68.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:50
Subject Length Description Subject Range Query Range Score Percent Strand
Nup154-PD 1365 CG4579-PD 1..1365 1..1365 7109 100 Plus
Nup154-PC 1365 CG4579-PC 1..1365 1..1365 7109 100 Plus
Nup154-PA 1365 CG4579-PA 1..1365 1..1365 7109 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18159-PA 1197 GI18159-PA 1..1196 177..1364 4370 68.2 Plus
Dmoj\GI18158-PA 119 GI18158-PA 9..116 9..115 308 59.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19137-PA 1253 GL19137-PA 626..1252 710..1364 2700 76 Plus
Dper\GL19137-PA 1253 GL19137-PA 1..635 1..639 2680 76.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:16:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18272-PB 587 GA18272-PB 1..587 1..591 2604 79.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:16:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18798-PA 1366 GM18798-PA 1..1366 1..1365 7073 96.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:16:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23750-PA 844 GD23750-PA 1..835 1..833 4372 96.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14586-PA 1372 GJ14586-PA 9..1371 9..1364 5180 70.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15250-PA 1387 GK15250-PA 3..1386 1..1364 5417 72.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:16:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18504-PA 1364 GE18504-PA 1..1363 1..1364 6727 90.3 Plus

LD21772.hyp Sequence

Translation from 126 to 4223

> LD21772.hyp
MTLPQAQLDFFTTATSMLEWHYNLERNKPGLLELTGVSQHGRATMSGLND
YDYQSLSFLKSDRTHNLQQMRTVTKSAIPNEILEHFKHIKCHCTMGLFPE
IGRAWLTIDSEIYIWTFNQTRDVAYYDGLSHLIVSVGLVKPKPGVFVQDV
KYLLVLTTPIEVIVLGVTFGESSYNEMQLMNRPVFVIGTDNVSISVIKGT
DDGRIFLGGRDGCLYEIYYQAESSWFGKRCKKINLSQGLVSYMVPSFLKV
FSEVDPIEHIEIDNSRKLLYVLTEKGVIEAWDISTSYTTARRLGRITQND
ITNQAVSLITTVDPSIFKSVKAICPLSADDADKLHLVAVTQCGVRLFFST
TSLNVKQQFGPAVPCSPGENTGFGQPAVQPPLSPNAEAPKGLYLLHVRLP
PGYTPNATTNKPKQVHAAHYTEGTMLMITTQQHEQDLLWSLSSAPSVNFT
YLVESTALESLDGVVWGLAEVHEPSTPQRKSPLNSARHARKVALLTNQGT
HIIEVLKMVDVLRQILLSCNGPHHEEVKMFFQSQNQREACVTALLLATSD
TYRGSDVALWAAQAFMLYGGEPCYQHQKFLNASNRNMANQTLGPNTTNVR
ERQSMFMSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSP
IVFSAKHDGLYMYVSRMLHSVWQMRCVNEQFCSNLSQSECALLLSDLRSL
RSFLEVHSVHDISSTTRVSFDNHLDRTNSYNTIMMGNTLLPIPEQRVLSE
QAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLL
TCSTFRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYR
HEDDVTYKATELLMNAKNCTSATEKEHMLRTTLHMCKEAAPTLPLHSICM
QFISADFFEGVIELSAVCASKSDPEEVGVHFYNNGEPADDREGYTCFATR
MAYYKEVQLMLDHIYQRVCNKTHVQDKSINPLKGTAKASDAKNGATQTIP
KIVAHTLKVKDPLIHITLYEWLLAHDMLKELLDVVEPSLGEFLRRSVSQN
VDNVVLIDLLWKYYEKNSHHSQAAHILDNLAMTRSENINLEQRIEYLVRA
VMCMRNGNVGSSLSNGIFLKELEDKLDIARVQKSVLAAMTELASDKLEAA
TAVKELNYALYDITQLYQHFAEPFDLWECQLSILNCSHHNDPLLIESVWG
QIINSVVDKPGTTSERCNRLFTKIEILVREYGESGVCFPFAFLIRELEVK
ACQLRFPEGIVPEKLVSMNLDIELLLEYYSRMISMNERVWANEGNEWHLI
QSVIRVVSLLADNAQSIWYRSKRRIVGKAQDIVAGCLNICYQKPDTNRLQ
HSLKELQSQLQRLLI*

LD21772.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:23:12
Subject Length Description Subject Range Query Range Score Percent Strand
Nup154-PD 1365 CG4579-PD 1..1365 1..1365 7109 100 Plus
Nup154-PC 1365 CG4579-PC 1..1365 1..1365 7109 100 Plus
Nup154-PA 1365 CG4579-PA 1..1365 1..1365 7109 100 Plus