BDGP Sequence Production Resources |
Search the DGRC for LD21785
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 217 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | bmm-RA |
Protein status: | LD21785.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2402 |
Gene | Date | Evidence |
---|---|---|
CG5295 | 2001-01-01 | Release 2 assignment |
CG5295 | 2001-07-04 | Blastp of sequenced clone |
CG5295 | 2003-01-01 | Sim4 clustering to Release 3 |
bmm | 2008-04-29 | Release 5.5 accounting |
bmm | 2008-08-15 | Release 5.9 accounting |
bmm | 2008-12-18 | 5.12 accounting |
2402 bp (2402 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051668
> LD21785.complete CCATCCGCAGAGCGAGTAAATAACGGTTCGCGAGCAACAACTTTTCATTT CGAGAGCGGAGTAATTTTTCCAGCCGACCGACAAACAGTGATTGAAAACC CAAACGAGATTTATTTCGAAACGCGACAAGAAATTGTTACATCAAAGGAG CTGCAACGACTAAAATCCGCGAAGAAAGTGCGAGAAAATACCTTAAAGAG AGAAAAAACCAGTGACGCAGTAGCAACAACAACAAACAGTCATCGAACGA TTTATAGAATCTAACGCCGAGTCCAAAGCATGAATCTATCATTCGCTGGC TGCGGATTCCTGGGCATCTACCACGTCGGAGTGGCCGTCTGCTTCAAGAA GTATGCACCGCATCTGTTGCTGGAGAAGATCGGAGGCGCTTCGGCCGGTT CCCTGGCCGCCTGCTGTCTCCTCTGCGATTTGCCATTGGGCAGCATGACT TCGGACTTCTTCAGGGTGGTGAACGAAGCTCGTCGCTACTCCCTGGGTCC CTTCAGTCCCTCCTTCAACATCCAGACCTGTCTGCTGGAGGGTCTACAGA AGCATCTACCAGACGATGCTCACAAGCGGGTGAATGGACGACTGCACATT TCGCTTACCCGCGTGTACGATGGCAAGAACGTGATCATCTCGGAGTTTGA GTCACGGGAAGAGGTCCTGCAGGCGCTGTTGTGTGCGTGCTTCATACCCG GATTCTCCGGCATCTTGCCGCCCAGATTCCGTGGCGTTCGCTACATGGAT GGTGCCTTCTCGGACAATCTGCCCATTCTGGACGAGAACACCATTACGGT CAGTCCGTTCTGCGGCGAGAGTGATATTTGCCCGAGGGATCAGAGCTCGC AGCTCTTCCATCTGAATTGGGCCAACACCAGCATCGAGATCTCCAGACAG AACATCAATCGCTTCGTGCGCATCCTTTTTCCGCCGCGTCCCGAGTTTCT GTCCAAGTTCTGCCAGCAGGGATTCGATGATGCCCTGCAATTCCTGCATC GCAACAATCTGATCAACTGTCGACGCTGCGTGGCGGTTCAGTCGACATTC GTGGTTTCCGAAACGGTGGCCCAGCCCCAGGAGTTCGATCCCGAGTGCAG GGAGTGCAAGAAGCACAGAAAGGACGCTTTGAGCTCAAACATGCCCCAAA CGGTACTGGATGTCATTCAGGACTATATCGAACAAGCCAATAAGGGTCTG GCCAACTGGATTTTCAAGCATCGCGGCATTAAGCTGCTTTCCCTACCAGC CACAGTGCCCATGGACTTTCTGCTGGCCACCATTTCAAAAATATCAGCAC TGACGCCCAAACTTACCAAGCAGGCCAGAGTAATGGTGGAGGACTTAATT TTGCAGTTGAACCACGCCATGCGGATACGACTGCTAAATAAATTCACGCT CTATGACCAGCCTCACTTCGATGCCACAGGACTTCTTCATTCCAGCCGCT TATATGGACCCCGTGTTTCAATCCTTGTGGATGAATGTGGAGCCACACCG CTAGAGGACGATGTCGACAACTTTGAGCATGTCCTCAAGATGACCACGCA CAACGACGCTCTATATGCCTATTACTATACTGACAGCAACACGAACAAGG TGAAAGTAACCGAGATCTTTGACTTTGACGAAATAACGGAGCACGACAAG CTGGCCACCGATCTGCAGATCTACGAAGGCTCTGTCGAAGATCACCCCAA TCCCCACCAGCACAGCCACAATACGGTGGTCAGCGAATGGAATGGCGTCG AATCAGTACAAGTAATGCCCACGACTCCTGAACTACACGACGTAGCCTTT TAAAGCACTTACAAACTAAACGACTATAAATGCACCTCCATAACCCTTCA CCCACTCAAGCATTAAGTCCAAATTTTAAATCGTTGGCGCAGACTTCTTC ATCGATGCGCATACACCAAATGTGGAGGATAGTAAAACATCAGCGCCACA ATTCTCCCGCCTGGACCTGGAGACCGAGTCGGATGCTAGTGTGCTAAGTG ATCCCGAGGTTGATCAGACTTTTAGCTCCACGGCCTCCACGCACAGCAGC GACATGTATATAGAAATTGAGGGGTAATTAGTAATGGGGAGGGGGCAATC CTCTTAGGAACTGTATCGAAACATCTCCAAAGCGGCTCGTAGCAAAGCGA AAAGCCTAGTAGCGTTTCCATTAGTCTAAATTAGTCTTAGTACGACCAAC GTATGTACCTAACTTAACTTAGCCGTATGCTGCCATTGTATCATCGTCAG TTTGTAAGCGGCAATTAGCTAATAATTGCATTCTTGTTATTAGTCACCCT CACACGACTTGTATTACATCCAAATCCCCATCTGTGTTTAGCCTAAGTTG ATAATGTATAAACAATAAAAAAAATAAACAACAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bmm-RA | 2508 | bmm-RA | 111..2495 | 1..2385 | 11925 | 100 | Plus |
bmm.a | 2560 | bmm.a | 67..1822 | 1..1756 | 8780 | 100 | Plus |
bmm-RB | 2382 | bmm-RB | 111..1866 | 1..1756 | 8780 | 100 | Plus |
bmm.a | 2560 | bmm.a | 1917..2548 | 1754..2385 | 3160 | 100 | Plus |
bmm-RB | 2382 | bmm-RB | 1864..2359 | 1890..2385 | 2480 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 14768491..14769175 | 1123..439 | 3365 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 14766648..14767140 | 2382..1890 | 2435 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 14776054..14776493 | 440..1 | 2200 | 100 | Minus |
chr3L | 24539361 | chr3L | 14767491..14767760 | 1756..1487 | 1335 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 14768263..14768431 | 1289..1121 | 830 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 14767258..14767396 | 1892..1754 | 695 | 100 | Minus |
chr3L | 24539361 | chr3L | 14768085..14768193 | 1398..1290 | 545 | 100 | Minus |
chr3L | 24539361 | chr3L | 14767830..14767919 | 1487..1398 | 450 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 14778339..14779023 | 1123..439 | 3425 | 100 | Minus |
3L | 28110227 | 3L | 14776493..14776988 | 2385..1890 | 2480 | 100 | Minus |
3L | 28110227 | 3L | 14785918..14786357 | 440..1 | 2200 | 100 | Minus |
3L | 28110227 | 3L | 14777339..14777608 | 1756..1487 | 1350 | 100 | Minus |
3L | 28110227 | 3L | 14778111..14778279 | 1289..1121 | 845 | 100 | Minus |
3L | 28110227 | 3L | 14777106..14777244 | 1892..1754 | 695 | 100 | Minus |
3L | 28110227 | 3L | 14777933..14778041 | 1398..1290 | 545 | 100 | Minus |
3L | 28110227 | 3L | 14777678..14777767 | 1487..1398 | 450 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 14771439..14772123 | 1123..439 | 3425 | 100 | Minus |
3L | 28103327 | 3L | 14769593..14770088 | 2385..1890 | 2480 | 100 | Minus |
3L | 28103327 | 3L | 14779018..14779457 | 440..1 | 2200 | 100 | Minus |
3L | 28103327 | 3L | 14770439..14770708 | 1756..1487 | 1350 | 100 | Minus |
3L | 28103327 | 3L | 14771211..14771379 | 1289..1121 | 845 | 100 | Minus |
3L | 28103327 | 3L | 14770206..14770344 | 1892..1754 | 695 | 100 | Minus |
3L | 28103327 | 3L | 14771033..14771141 | 1398..1290 | 545 | 100 | Minus |
3L | 28103327 | 3L | 14770778..14770867 | 1487..1398 | 450 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 14766671..14767137 | 1893..2359 | 99 | <- | Minus |
chr3L | 14767258..14767393 | 1757..1892 | 100 | <- | Minus |
chr3L | 14767491..14767759 | 1488..1756 | 99 | <- | Minus |
chr3L | 14767830..14767918 | 1399..1487 | 100 | <- | Minus |
chr3L | 14768085..14768193 | 1290..1398 | 100 | <- | Minus |
chr3L | 14768263..14768429 | 1123..1289 | 99 | <- | Minus |
chr3L | 14768492..14769174 | 440..1122 | 99 | <- | Minus |
chr3L | 14776055..14776493 | 1..439 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bmm-RA | 1..1524 | 280..1803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bmm-RA | 1..1524 | 280..1803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bmm-RA | 1..1524 | 280..1803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bmm-RA | 1..1524 | 280..1803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bmm-RA | 1..1524 | 280..1803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bmm-RA | 67..2425 | 1..2359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bmm-RA | 67..2425 | 1..2359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bmm-RA | 56..2414 | 1..2359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bmm-RA | 67..2425 | 1..2359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bmm-RA | 56..2414 | 1..2359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14776519..14776985 | 1893..2359 | 100 | <- | Minus |
3L | 14777106..14777241 | 1757..1892 | 100 | <- | Minus |
3L | 14777339..14777607 | 1488..1756 | 100 | <- | Minus |
3L | 14777678..14777766 | 1399..1487 | 100 | <- | Minus |
3L | 14777933..14778041 | 1290..1398 | 100 | <- | Minus |
3L | 14778111..14778277 | 1123..1289 | 100 | <- | Minus |
3L | 14778340..14779022 | 440..1122 | 100 | <- | Minus |
3L | 14785919..14786357 | 1..439 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14776519..14776985 | 1893..2359 | 100 | <- | Minus |
3L | 14777106..14777241 | 1757..1892 | 100 | <- | Minus |
3L | 14777339..14777607 | 1488..1756 | 100 | <- | Minus |
3L | 14777678..14777766 | 1399..1487 | 100 | <- | Minus |
3L | 14777933..14778041 | 1290..1398 | 100 | <- | Minus |
3L | 14778111..14778277 | 1123..1289 | 100 | <- | Minus |
3L | 14778340..14779022 | 440..1122 | 100 | <- | Minus |
3L | 14785919..14786357 | 1..439 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14776519..14776985 | 1893..2359 | 100 | <- | Minus |
3L | 14777106..14777241 | 1757..1892 | 100 | <- | Minus |
3L | 14777339..14777607 | 1488..1756 | 100 | <- | Minus |
3L | 14777678..14777766 | 1399..1487 | 100 | <- | Minus |
3L | 14777933..14778041 | 1290..1398 | 100 | <- | Minus |
3L | 14778111..14778277 | 1123..1289 | 100 | <- | Minus |
3L | 14778340..14779022 | 440..1122 | 100 | <- | Minus |
3L | 14785919..14786357 | 1..439 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 14771033..14771141 | 1290..1398 | 100 | <- | Minus |
arm_3L | 14771211..14771377 | 1123..1289 | 100 | <- | Minus |
arm_3L | 14769619..14770085 | 1893..2359 | 100 | <- | Minus |
arm_3L | 14770206..14770341 | 1757..1892 | 100 | <- | Minus |
arm_3L | 14770439..14770707 | 1488..1756 | 100 | <- | Minus |
arm_3L | 14770778..14770866 | 1399..1487 | 100 | <- | Minus |
arm_3L | 14771440..14772122 | 440..1122 | 100 | <- | Minus |
arm_3L | 14779019..14779457 | 1..439 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14779019..14779457 | 1..439 | 100 | Minus | |
3L | 14769619..14770085 | 1893..2359 | 100 | <- | Minus |
3L | 14770206..14770341 | 1757..1892 | 100 | <- | Minus |
3L | 14770439..14770707 | 1488..1756 | 100 | <- | Minus |
3L | 14770778..14770866 | 1399..1487 | 100 | <- | Minus |
3L | 14771033..14771141 | 1290..1398 | 100 | <- | Minus |
3L | 14771211..14771377 | 1123..1289 | 100 | <- | Minus |
3L | 14771440..14772122 | 440..1122 | 100 | <- | Minus |
Translation from 279 to 1802
> LD21785.pep MNLSFAGCGFLGIYHVGVAVCFKKYAPHLLLEKIGGASAGSLAACCLLCD LPLGSMTSDFFRVVNEARRYSLGPFSPSFNIQTCLLEGLQKHLPDDAHKR VNGRLHISLTRVYDGKNVIISEFESREEVLQALLCACFIPGFSGILPPRF RGVRYMDGAFSDNLPILDENTITVSPFCGESDICPRDQSSQLFHLNWANT SIEISRQNINRFVRILFPPRPEFLSKFCQQGFDDALQFLHRNNLINCRRC VAVQSTFVVSETVAQPQEFDPECRECKKHRKDALSSNMPQTVLDVIQDYI EQANKGLANWIFKHRGIKLLSLPATVPMDFLLATISKISALTPKLTKQAR VMVEDLILQLNHAMRIRLLNKFTLYDQPHFDATGLLHSSRLYGPRVSILV DECGATPLEDDVDNFEHVLKMTTHNDALYAYYYTDSNTNKVKVTEIFDFD EITEHDKLATDLQIYEGSVEDHPNPHQHSHNTVVSEWNGVESVQVMPTTP ELHDVAF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25180-PA | 507 | GF25180-PA | 1..507 | 1..507 | 2674 | 96.8 | Plus |
Dana\GF21217-PA | 434 | GF21217-PA | 6..274 | 2..268 | 940 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13706-PA | 507 | GG13706-PA | 1..507 | 1..507 | 2723 | 99.6 | Plus |
Dere\GG17860-PA | 448 | GG17860-PA | 8..254 | 2..246 | 888 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11087-PA | 504 | GH11087-PA | 1..504 | 1..507 | 2481 | 90.2 | Plus |
Dgri\GH17183-PA | 499 | GH17183-PA | 1..499 | 1..507 | 2318 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bmm-PA | 507 | CG5295-PA | 1..507 | 1..507 | 2686 | 100 | Plus |
bmm-PB | 553 | CG5295-PB | 1..492 | 1..492 | 2607 | 100 | Plus |
dob-PA | 480 | CG5560-PA | 8..293 | 2..288 | 937 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17604-PA | 504 | GI17604-PA | 1..504 | 1..507 | 2473 | 90 | Plus |
Dmoj\GI13942-PA | 482 | GI13942-PA | 1..482 | 1..490 | 2112 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26073-PA | 282 | GL26073-PA | 1..282 | 56..337 | 1513 | 99.6 | Plus |
Dper\GL15174-PA | 415 | GL15174-PA | 1..342 | 1..386 | 1038 | 58.3 | Plus |
Dper\GL26084-PA | 163 | GL26084-PA | 1..163 | 345..507 | 827 | 93.3 | Plus |
Dper\GL19691-PA | 89 | GL19691-PA | 5..80 | 1..74 | 236 | 72.4 | Plus |
Dper\GL15291-PA | 89 | GL15291-PA | 5..81 | 1..75 | 224 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18792-PA | 507 | GA18792-PA | 1..507 | 1..507 | 2672 | 97.2 | Plus |
Dpse\GA18971-PA | 419 | GA18971-PA | 5..346 | 1..386 | 1037 | 58.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24528-PA | 507 | GM24528-PA | 1..507 | 1..507 | 2702 | 99 | Plus |
Dsec\GM12054-PA | 362 | GM12054-PA | 8..156 | 2..150 | 529 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12598-PA | 507 | GD12598-PA | 1..507 | 1..507 | 2723 | 99.6 | Plus |
Dsim\GD17188-PA | 481 | GD17188-PA | 8..280 | 2..275 | 914 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17950-PA | 504 | GJ17950-PA | 1..504 | 1..507 | 2494 | 90.6 | Plus |
Dvir\GJ13733-PA | 503 | GJ13733-PA | 1..503 | 1..507 | 2386 | 86.6 | Plus |
Translation from 279 to 1802
> LD21785.hyp MNLSFAGCGFLGIYHVGVAVCFKKYAPHLLLEKIGGASAGSLAACCLLCD LPLGSMTSDFFRVVNEARRYSLGPFSPSFNIQTCLLEGLQKHLPDDAHKR VNGRLHISLTRVYDGKNVIISEFESREEVLQALLCACFIPGFSGILPPRF RGVRYMDGAFSDNLPILDENTITVSPFCGESDICPRDQSSQLFHLNWANT SIEISRQNINRFVRILFPPRPEFLSKFCQQGFDDALQFLHRNNLINCRRC VAVQSTFVVSETVAQPQEFDPECRECKKHRKDALSSNMPQTVLDVIQDYI EQANKGLANWIFKHRGIKLLSLPATVPMDFLLATISKISALTPKLTKQAR VMVEDLILQLNHAMRIRLLNKFTLYDQPHFDATGLLHSSRLYGPRVSILV DECGATPLEDDVDNFEHVLKMTTHNDALYAYYYTDSNTNKVKVTEIFDFD EITEHDKLATDLQIYEGSVEDHPNPHQHSHNTVVSEWNGVESVQVMPTTP ELHDVAF*