BDGP Sequence Production Resources |
Search the DGRC for LD21829
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 218 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9853-RA |
Protein status: | LD21829.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1354 |
Gene | Date | Evidence |
---|---|---|
CG9853 | 2001-01-01 | Release 2 assignment |
CG9853 | 2002-07-13 | Blastp of sequenced clone |
CG9853 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9853 | 2008-04-29 | Release 5.5 accounting |
CG9853 | 2008-08-15 | Release 5.9 accounting |
CG9853 | 2008-12-18 | 5.12 accounting |
1354 bp (1354 high quality bases) assembled on 2002-07-13
GenBank Submission: BT001480
> LD21829.complete ACCGATAGTTTGTCATCGGGAAGCTGGTATATGTAAATACAAAATAAATT ATAAAAATTGGCTTCCACATAATTGAGAAGGTCGCTGAAAGCGTACGAAT AAACCCCGCAAATAACCAAATGTCTGCCGCCGAGACAGGTCCAATAGCCA GCGGCAGTGCGGTGTCCACTGGACAGCGCGGTGTCAGCCGAGTACTTGCC AAGTTGTCCCAGTCTCTGGCAGGAGGAGAATTCTATGAAGCGCACATGAT GTATAGGACGCTGTATTTTCGGTATACGGCGCAGAAACGCTATCAGGACT GCCTGGAACTGCTCTTTGATGGAGCACAGCAGCTTATTGCCAAGGAACAG GAAAGCAGCGCCGCGGACCTATGTCTCCTTCTGGTGGACACGTTAGAGAA GCGAGGACCACAGGCGGAAGATACCGACAACTTCCTGTGGGTTCCACGCC TAGGGGCTTTGATCCGCGGCCTTAACTCCGCGACTGTAGAGCGCGAAACC CTTATTCAACGGACCATTAAGTGGAGCACGGCCTTGCATGGCCAGTATGG CCACCCAGTGCTCCATAAGTTAATTGCGCACGTGTTTTGGACCGAGGGCA ACATTGAGTCGGCTCGTCACCACTATCTACTCTGCCAGGATGGCAGCCTA TGTGGGCGAGTGCTAATTGAAATCAGCCAGAGCAGGGGCTTCCAGGGCGA GATGGACTTGTTTCTGGTACAAGCTGTGCTGCAGCAGCTATCCCTTAAGG ATCGGAAAACTGCAGAGGACACGTTCACTGAGTACACACGCTACCACGCC AAGCTGCTTAAGCATGAGTTCCCCTATAAGGAACCGCTGGTCAACTTCTT GTACTTCCTATTCCGTCTTATTGACGCGAAGCGTGTGGCTGGGTTTCGGG CCTTACGCAAGCTTTACGATCCATCCCTAAAGCGCGACACGTCTTTTCTA AAGTACGTAGCCAAGATTGGGGTGCTGTATTTCGACGAGCATCCGGAGGC TGCTCATTCTGGCCCGCCCGGGTTGGGCGGAATGTTTGGTGACATATTCA ATCGCCTTATGGCGGGCTTTGAGGAAGATGATGCGGACGATCATGACACG ACCCTGAGGCGGCAAAACGAGAATAACGAACTGGAATAGCATGTATGCAT TAATGAAGCATACCGAAGAGGGATCCTTTGTTGCTGGTCTTTTTGGTTGC TCAAAGTCAATGAAGTTCTTTGCCACAAAATCATCGGGCTATTTTGTTAT AACTTTAAATTGCTGTATGCTAAATAATTTTAAATAAGCGTATGGTCTTG ATTATGCAAATTATAAAAAAATAGTTATTCAAACAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 224277..225104 | 1334..507 | 4140 | 100 | Minus |
chr3R | 27901430 | chr3R | 225458..225731 | 274..1 | 1370 | 100 | Minus |
chr3R | 27901430 | chr3R | 225165..225400 | 506..271 | 1180 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4398553..4399385 | 1339..507 | 4165 | 100 | Minus |
3R | 32079331 | 3R | 4399739..4400012 | 274..1 | 1370 | 100 | Minus |
3R | 32079331 | 3R | 4399446..4399681 | 506..271 | 1180 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4139384..4140216 | 1339..507 | 4165 | 100 | Minus |
3R | 31820162 | 3R | 4140570..4140843 | 274..1 | 1370 | 100 | Minus |
3R | 31820162 | 3R | 4140277..4140512 | 506..271 | 1180 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 224277..225104 | 507..1334 | 100 | <- | Minus |
chr3R | 225165..225399 | 272..506 | 100 | <- | Minus |
chr3R | 225461..225731 | 1..271 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9853-RB | 1..1020 | 120..1139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9853-RB | 1..1020 | 120..1139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9853-RA | 1..1020 | 120..1139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9853-RB | 1..1020 | 120..1139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9853-RA | 1..1020 | 120..1139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9853-RA | 1..1334 | 1..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9853-RB | 485..1818 | 1..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9853-RB | 485..1818 | 1..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9853-RA | 1..1334 | 1..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9853-RB | 485..1818 | 1..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4398558..4399385 | 507..1334 | 100 | <- | Minus |
3R | 4399446..4399680 | 272..506 | 100 | <- | Minus |
3R | 4399742..4400012 | 1..271 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4398558..4399385 | 507..1334 | 100 | <- | Minus |
3R | 4399446..4399680 | 272..506 | 100 | <- | Minus |
3R | 4399742..4400012 | 1..271 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4398558..4399385 | 507..1334 | 100 | <- | Minus |
3R | 4399446..4399680 | 272..506 | 100 | <- | Minus |
3R | 4399742..4400012 | 1..271 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 225464..225734 | 1..271 | 100 | Minus | |
arm_3R | 224280..225107 | 507..1334 | 100 | <- | Minus |
arm_3R | 225168..225402 | 272..506 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4139389..4140216 | 507..1334 | 100 | <- | Minus |
3R | 4140277..4140511 | 272..506 | 100 | <- | Minus |
3R | 4140573..4140843 | 1..271 | 100 | Minus |
Translation from 119 to 1138
> LD21829.pep MSAAETGPIASGSAVSTGQRGVSRVLAKLSQSLAGGEFYEAHMMYRTLYF RYTAQKRYQDCLELLFDGAQQLIAKEQESSAADLCLLLVDTLEKRGPQAE DTDNFLWVPRLGALIRGLNSATVERETLIQRTIKWSTALHGQYGHPVLHK LIAHVFWTEGNIESARHHYLLCQDGSLCGRVLIEISQSRGFQGEMDLFLV QAVLQQLSLKDRKTAEDTFTEYTRYHAKLLKHEFPYKEPLVNFLYFLFRL IDAKRVAGFRALRKLYDPSLKRDTSFLKYVAKIGVLYFDEHPEAAHSGPP GLGGMFGDIFNRLMAGFEEDDADDHDTTLRRQNENNELE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16811-PA | 337 | GF16811-PA | 1..337 | 1..339 | 1493 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11609-PA | 339 | GG11609-PA | 1..339 | 1..339 | 1688 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14232-PA | 348 | GH14232-PA | 19..328 | 14..323 | 1287 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9853-PC | 339 | CG9853-PC | 1..339 | 1..339 | 1764 | 100 | Plus |
CG9853-PB | 339 | CG9853-PB | 1..339 | 1..339 | 1764 | 100 | Plus |
CG9853-PA | 339 | CG9853-PA | 1..339 | 1..339 | 1764 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22138-PA | 342 | GI22138-PA | 23..342 | 19..339 | 1445 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22353-PA | 336 | GL22353-PA | 17..333 | 18..335 | 1471 | 85.2 | Plus |
Dper\GL21464-PA | 148 | GL21464-PA | 22..97 | 155..230 | 353 | 86.8 | Plus |
Dper\GL21464-PA | 148 | GL21464-PA | 89..145 | 276..335 | 170 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22074-PA | 336 | GA22074-PA | 17..333 | 18..335 | 1471 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10704-PA | 339 | GM10704-PA | 1..339 | 1..339 | 1783 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19681-PA | 339 | GD19681-PA | 1..339 | 1..339 | 1783 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24257-PA | 343 | GJ24257-PA | 20..343 | 16..339 | 1434 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13758-PA | 342 | GK13758-PA | 1..342 | 1..339 | 1341 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25354-PA | 339 | GE25354-PA | 1..339 | 1..339 | 1662 | 94.4 | Plus |
Translation from 119 to 1138
> LD21829.hyp MSAAETGPIASGSAVSTGQRGVSRVLAKLSQSLAGGEFYEAHMMYRTLYF RYTAQKRYQDCLELLFDGAQQLIAKEQESSAADLCLLLVDTLEKRGPQAE DTDNFLWVPRLGALIRGLNSATVERETLIQRTIKWSTALHGQYGHPVLHK LIAHVFWTEGNIESARHHYLLCQDGSLCGRVLIEISQSRGFQGEMDLFLV QAVLQQLSLKDRKTAEDTFTEYTRYHAKLLKHEFPYKEPLVNFLYFLFRL IDAKRVAGFRALRKLYDPSLKRDTSFLKYVAKIGVLYFDEHPEAAHSGPP GLGGMFGDIFNRLMAGFEEDDADDHDTTLRRQNENNELE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9853-PC | 339 | CG9853-PC | 1..339 | 1..339 | 1764 | 100 | Plus |
CG9853-PB | 339 | CG9853-PB | 1..339 | 1..339 | 1764 | 100 | Plus |
CG9853-PA | 339 | CG9853-PA | 1..339 | 1..339 | 1764 | 100 | Plus |