BDGP Sequence Production Resources |
Search the DGRC for LD21907
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 219 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | BigH1-RA |
Protein status: | LD21907.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1260 |
Gene | Date | Evidence |
---|---|---|
CG3509 | 2001-01-01 | Release 2 assignment |
CG3509 | 2002-05-15 | Blastp of sequenced clone |
CG3509 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3509 | 2008-04-29 | Release 5.5 accounting |
CG3509 | 2008-08-15 | Release 5.9 accounting |
CG3509 | 2008-12-18 | 5.12 accounting |
1260 bp (1260 high quality bases) assembled on 2002-05-15
GenBank Submission: AY118915
> LD21907.complete TTACTGCGAGTTTTCGATTACCGTTTTGTTAACCTTTTTTCGTGTCTTAA AAGTTGTTGAGTTGTATTTCTAATTTTTGTTCAATTTAATTTCCAACTAA TAACATGAAACTAAAGCCGGTTGAACGCAATGATGGCTCGGATGATGAGA GCGAGGAGGAAATGCCAAATGATCATCCCGAATCCGAAGACTCCAATATG GGCGAAGAAGAGGAGCTCCCGGAGGAAGATGAGGAGGAGATGGAGGAGGA TGAGGAGGAGGATCGGCAGGACGGTGACGAGGTCGAGACAGATAATCTCG GAGCTGATCGCAATCCCTATCCCACTCCGCCGCCTGATGATGGGTCGAAA CTGGTGCCCCCCGATTCTGACAACCCCAAGTCGATGGTCCCAAAACCAAA GGGTACGCTCATATCCCTAGCTCTTATGGCCATCGGGAAGTTGGCGAGCC GATCGGGCTCATCGGTTCAGGCCATAATGACATACCTAAAGGACAATGGT CAGGAGTGGAAGGATCCGAAGAAAACCGCCCGCCTCCTCCATCGAGCTTT AAAATTGGCCGAAGCCAACGGCGAAGTGGTGATGGTTAAGCGATCCTTTA AACTCACCGATAAGCAGAAGAACTCCTCAAAGGCTGTGGAGAAAATGAAG GCAAAGAAACAGAAGGAGAAGGAAAAGAAAGCCAAAGTTGAGAAAGTTTT AAAGGAGAAGATTCAAAAGAAAGAGGCCAAGGCGAAGATGAAGGAAAAGA AGGCCTCCAAGGAAAAATCCAGTAAACCAACCGAGCGGAAAACAAAACAA GCTGTAAAAAAGAAGAAGCCCGAGGATGGAACCAAGGATAATCCGCCAGC ATCTAAAGCAGCTTCATCCGCTGCCGCGCAGGCCATGCTGGAAACATCCC AGACAGCGATTCCTGAAGCGGGAAAGAAGCCGGCCAAAACCAAAGTCAAG CTACAAGCGGATTCATCCGAGGCGGGAAAGACTAAAAAGTCGCGAAAGTC CATTGGAACTCTGGCTCAGCCCAAGGCAGCCAGGCCGAAAGTCAAGGCGG TCAAGAAACTGGTGGCTGGAAAGGGAGCCTCCACACCGGATCTTTCCATA ATGGAGGCCCAGGCCACGTCGACTCCTCAAGGAGCTACCAAGGCGAAGCG CAAGCGCAAAGTCTAGTTATGATTTATATGTTTTTTTTTCAGTACATGTG AAACTTTGTTTAAATAAAATTGATACTTTTTTAGTTCCTAGCAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3509-RA | 1315 | CG3509-RA | 61..1304 | 1..1244 | 6220 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rt1a | 5108 | Rt1a DME278684 5108bp Derived from AJ278684 (AJ278684.1) (Rel. 64, Last updated, Version 1). | 318..376 | 109..52 | 148 | 74.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10488991..10489038 | 753..800 | 100 | -> | Plus |
chr3R | 10489133..10489574 | 801..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3509-RA | 1..1062 | 105..1166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3509-RA | 1..1062 | 105..1166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3509-RA | 1..1062 | 105..1166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3509-RA | 1..1062 | 105..1166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BigH1-RA | 1..1062 | 105..1166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3509-RA | 45..1286 | 1..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3509-RA | 45..1286 | 1..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3509-RA | 45..1286 | 1..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3509-RA | 45..1286 | 1..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BigH1-RA | 38..1279 | 1..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14663487..14664286 | 1..800 | 100 | -> | Plus |
3R | 14664381..14664822 | 801..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14663487..14664286 | 1..800 | 100 | -> | Plus |
3R | 14664381..14664822 | 801..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14663487..14664286 | 1..800 | 100 | -> | Plus |
3R | 14664381..14664822 | 801..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10489209..10490008 | 1..800 | 100 | -> | Plus |
arm_3R | 10490103..10490544 | 801..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14404318..14405117 | 1..800 | 100 | -> | Plus |
3R | 14405212..14405653 | 801..1242 | 100 | Plus |
Translation from 104 to 1165
> LD21907.pep MKLKPVERNDGSDDESEEEMPNDHPESEDSNMGEEEELPEEDEEEMEEDE EEDRQDGDEVETDNLGADRNPYPTPPPDDGSKLVPPDSDNPKSMVPKPKG TLISLALMAIGKLASRSGSSVQAIMTYLKDNGQEWKDPKKTARLLHRALK LAEANGEVVMVKRSFKLTDKQKNSSKAVEKMKAKKQKEKEKKAKVEKVLK EKIQKKEAKAKMKEKKASKEKSSKPTERKTKQAVKKKKPEDGTKDNPPAS KAASSAAAQAMLETSQTAIPEAGKKPAKTKVKLQADSSEAGKTKKSRKSI GTLAQPKAARPKVKAVKKLVAGKGASTPDLSIMEAQATSTPQGATKAKRK RKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18591-PA | 351 | GF18591-PA | 49..351 | 56..353 | 456 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16870-PA | 347 | GG16870-PA | 1..336 | 1..342 | 1034 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18895-PA | 294 | GH18895-PA | 32..118 | 70..167 | 161 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
BigH1-PA | 353 | CG3509-PA | 1..353 | 1..353 | 1771 | 100 | Plus |
futsch-PF | 5495 | CG34387-PF | 1997..2334 | 10..353 | 158 | 20 | Plus |
futsch-PE | 5495 | CG34387-PE | 1997..2334 | 10..353 | 158 | 20 | Plus |
futsch-PC | 5495 | CG34387-PC | 1997..2334 | 10..353 | 158 | 20 | Plus |
futsch-PF | 5495 | CG34387-PF | 3349..3666 | 7..353 | 156 | 21.1 | Plus |
futsch-PE | 5495 | CG34387-PE | 3349..3666 | 7..353 | 156 | 21.1 | Plus |
futsch-PC | 5495 | CG34387-PC | 3349..3666 | 7..353 | 156 | 21.1 | Plus |
His1:CG33861-PA | 256 | CG33861-PA | 56..256 | 109..318 | 149 | 28.3 | Plus |
His1:CG33858-PA | 256 | CG33858-PA | 56..256 | 109..318 | 149 | 28.3 | Plus |
His1:CG33855-PA | 256 | CG33855-PA | 56..256 | 109..318 | 149 | 28.3 | Plus |
His1:CG33834-PA | 256 | CG33834-PA | 56..256 | 109..318 | 149 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24753-PA | 285 | GI24753-PA | 18..279 | 99..349 | 265 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14299-PA | 388 | GL14299-PA | 112..388 | 97..352 | 218 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22744-PA | 421 | GA22744-PA | 112..206 | 97..191 | 210 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24179-PA | 352 | GM24179-PA | 1..352 | 1..353 | 1069 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18972-PA | 352 | GD18972-PA | 1..352 | 1..353 | 1057 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24251-PA | 350 | GE24251-PA | 1..350 | 1..353 | 934 | 76.6 | Plus |
Translation from 104 to 1165
> LD21907.hyp MKLKPVERNDGSDDESEEEMPNDHPESEDSNMGEEEELPEEDEEEMEEDE EEDRQDGDEVETDNLGADRNPYPTPPPDDGSKLVPPDSDNPKSMVPKPKG TLISLALMAIGKLASRSGSSVQAIMTYLKDNGQEWKDPKKTARLLHRALK LAEANGEVVMVKRSFKLTDKQKNSSKAVEKMKAKKQKEKEKKAKVEKVLK EKIQKKEAKAKMKEKKASKEKSSKPTERKTKQAVKKKKPEDGTKDNPPAS KAASSAAAQAMLETSQTAIPEAGKKPAKTKVKLQADSSEAGKTKKSRKSI GTLAQPKAARPKVKAVKKLVAGKGASTPDLSIMEAQATSTPQGATKAKRK RKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
BigH1-PA | 353 | CG3509-PA | 1..353 | 1..353 | 1771 | 100 | Plus |
futsch-PF | 5495 | CG34387-PF | 1997..2334 | 10..353 | 158 | 20 | Plus |
futsch-PE | 5495 | CG34387-PE | 1997..2334 | 10..353 | 158 | 20 | Plus |
futsch-PC | 5495 | CG34387-PC | 1997..2334 | 10..353 | 158 | 20 | Plus |
futsch-PF | 5495 | CG34387-PF | 3349..3666 | 7..353 | 156 | 21.1 | Plus |
futsch-PE | 5495 | CG34387-PE | 3349..3666 | 7..353 | 156 | 21.1 | Plus |
futsch-PC | 5495 | CG34387-PC | 3349..3666 | 7..353 | 156 | 21.1 | Plus |
His1:CG33861-PA | 256 | CG33861-PA | 56..256 | 109..318 | 149 | 28.3 | Plus |