BDGP Sequence Production Resources |
Search the DGRC for LD21941
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 219 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | Ost48-RA |
Protein status: | LD21941.pep: gold |
Preliminary Size: | 1711 |
Sequenced Size: | 1508 |
Gene | Date | Evidence |
---|---|---|
CG9022 | 2001-01-01 | Release 2 assignment |
CG9022 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9022 | 2003-04-25 | Blastp of sequenced clone |
Ost48 | 2008-04-29 | Release 5.5 accounting |
Ost48 | 2008-08-15 | Release 5.9 accounting |
Ost48 | 2008-12-18 | 5.12 accounting |
1508 bp assembled on 2006-11-09
GenBank Submission: BT010050
> LD21941.complete ACAGCCAGTCATTTTTTTTTCAAGAAAAGCCGGAGAGAATTTTGTGTTTT AGTTGGATAAAATGATGTGGAAGGCTCTCCTGATCGCCGTTTTGGCGATT GCCCACTGCCAGGCGGTACTGGAAACGGACGCCAACACCTTGGTTCTGCT GGACAACCTGGCCATCCGGGAAACCCACTCGATCTTCTTCAAATCGCTGC AGGATCGCGGATTTAAGCTCACCTACAAACTGGCGGATGACTCCAGCCTG CTGCTGTCCAAATACGGTGAATATCTGTACAAGAACGTCATCATATTCGC ACCAAGTGTCGAGGAATTCGGCGGCGATGTGAGCGTGGAGCGTTTGGCCC AGTTCGTCGACGATGGCGGCAATGTTCTGGTGGCGGGCAGCGAGAAATCC GGCGACGCGCTAAGGGAATTCGCCTCCGAGTGCGGCTTCGAGCTGGACGA GGAGAATGCGGCGGTCATTGACCATCTGCACTACGATGTTAGCGATGCTG GCGAGCACACAACCATCCTGACCTCCGCCAAGAATCTTATACAGGCCGAC ACCATTGTGGGCAAGGCCAACAGGCAGGCGGATGCCGCACCGCTGCTCTA TCGCGGTACAGGACTGATTGCCGACAAGGAGAACCCGCTGGTACTCAAGC TGCTGACCGCCGAGAGCACCGCCTATAGCTACAATCCCGAGGCAAGTGTC TCCGACTATCCGCATGCCGTTGGCCGAGGCACGCTGCTAATCGCCGCCCT GCAGGCGAGGAACAATGCCCGCGTAGTGTTCTCCGGCTCGCTGCTCTTCT TCTCTGACGAGAGCTTCACAACGGCCGTGCAGTACGCACAGAGCGGTGTG TTCCACAAGCTGGCCGGTAATCGCGACGTGGCCGAGTCCATTAGCAAGTG GGTATTTGGAGAGACTGGCCGCTTGCGCGTGGCATCCGTGCAACATCACA AGGAGGGCGAGCTGCTGCCACCGGATCAGGCGTACACCATCACCGATCCG GTCGTCTACACCATCGGCATCGAGGAGCTGGTGCAGGGCGAGTGGCGCGC CTTTAAGGCCAGCGACATTCAACTGGAGTTCGTGCGCATCGATCCCTTCG TCCGCACCTATCTGAAGCAAACGAACACGGGCGCCTACCAGGCCAAATTC AAGATACCCGACGTCTACGGCGTTTATCAGTTCAAGGTGGACTACAATCG CGTGGGCTACACGCATCTGTACAGCACCACCCAGGTGTCGGTGCGTCCGC TGGAGCACACACAGTACGAGCGCTTTATCCCGAGCGCATTCCCCTACTAC ACCAGCGCCTTCTCAATGATGATCGGCGTGTTTGTCTTCTCATTCGTGTT CCTTCACTTCAAGGATGAGCCCGTGGGCAGGGCCGCCAAGGAGGACAAGA AGTCGCAGTAGTATGCACGTTCGTTCAACTCAAATGTAACACACAATGCA CTAAAATAAAGTTCTCTGCAGAGAGAAACCCACAATCCATAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ost48-RA | 1576 | Ost48-RA | 65..1560 | 1..1494 | 7425 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9048729..9050015 | 204..1490 | 99 | <- | Minus |
chrX | 9050090..9050294 | 1..203 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ost48-RA | 1..1350 | 62..1411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ost48-RA | 1..1350 | 62..1411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ost48-RA | 1..1350 | 62..1411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ost48-RA | 1..1350 | 62..1411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ost48-RA | 1..1350 | 62..1411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ost48-RA | 18..1509 | 1..1490 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ost48-RA | 18..1509 | 1..1490 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ost48-RA | 22..1513 | 1..1490 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ost48-RA | 18..1509 | 1..1490 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ost48-RA | 22..1513 | 1..1490 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9156929..9158215 | 204..1490 | 100 | <- | Minus |
X | 9158290..9158494 | 1..203 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9156929..9158215 | 204..1490 | 100 | <- | Minus |
X | 9158290..9158494 | 1..203 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9156929..9158215 | 204..1490 | 100 | <- | Minus |
X | 9158290..9158494 | 1..203 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9050962..9052248 | 204..1490 | 100 | <- | Minus |
arm_X | 9052323..9052527 | 1..203 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9165027..9166313 | 204..1490 | 100 | <- | Minus |
X | 9166388..9166592 | 1..203 | 99 | Minus |
Translation from 61 to 1410
> LD21941.pep MMWKALLIAVLAIAHCQAVLETDANTLVLLDNLAIRETHSIFFKSLQDRG FKLTYKLADDSSLLLSKYGEYLYKNVIIFAPSVEEFGGDVSVERLAQFVD DGGNVLVAGSEKSGDALREFASECGFELDEENAAVIDHLHYDVSDAGEHT TILTSAKNLIQADTIVGKANRQADAAPLLYRGTGLIADKENPLVLKLLTA ESTAYSYNPEASVSDYPHAVGRGTLLIAALQARNNARVVFSGSLLFFSDE SFTTAVQYAQSGVFHKLAGNRDVAESISKWVFGETGRLRVASVQHHKEGE LLPPDQAYTITDPVVYTIGIEELVQGEWRAFKASDIQLEFVRIDPFVRTY LKQTNTGAYQAKFKIPDVYGVYQFKVDYNRVGYTHLYSTTQVSVRPLEHT QYERFIPSAFPYYTSAFSMMIGVFVFSFVFLHFKDEPVGRAAKEDKKSQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19216-PA | 449 | GF19216-PA | 1..449 | 1..449 | 2237 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18999-PA | 449 | GG18999-PA | 1..449 | 1..449 | 2348 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11906-PA | 449 | GH11906-PA | 1..449 | 2..449 | 2076 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ost48-PA | 449 | CG9022-PA | 1..449 | 1..449 | 2294 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21480-PA | 446 | GI21480-PA | 1..446 | 2..449 | 2098 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26830-PA | 448 | GL26830-PA | 1..448 | 2..449 | 2180 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21484-PA | 448 | GA21484-PA | 1..448 | 2..449 | 2195 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13675-PA | 449 | GM13675-PA | 1..449 | 1..449 | 2366 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16081-PA | 449 | GD16081-PA | 1..449 | 1..449 | 2382 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18511-PA | 449 | GJ18511-PA | 1..449 | 2..449 | 2102 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25161-PA | 450 | GK25161-PA | 1..450 | 2..449 | 2148 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17411-PA | 449 | GE17411-PA | 1..449 | 1..449 | 2364 | 98.7 | Plus |
Translation from 61 to 1410
> LD21941.hyp MMWKALLIAVLAIAHCQAVLETDANTLVLLDNLAIRETHSIFFKSLQDRG FKLTYKLADDSSLLLSKYGEYLYKNVIIFAPSVEEFGGDVSVERLAQFVD DGGNVLVAGSEKSGDALREFASECGFELDEENAAVIDHLHYDVSDAGEHT TILTSAKNLIQADTIVGKANRQADAAPLLYRGTGLIADKENPLVLKLLTA ESTAYSYNPEASVSDYPHAVGRGTLLIAALQARNNARVVFSGSLLFFSDE SFTTAVQYAQSGVFHKLAGNRDVAESISKWVFGETGRLRVASVQHHKEGE LLPPDQAYTITDPVVYTIGIEELVQGEWRAFKASDIQLEFVRIDPFVRTY LKQTNTGAYQAKFKIPDVYGVYQFKVDYNRVGYTHLYSTTQVSVRPLEHT QYERFIPSAFPYYTSAFSMMIGVFVFSFVFLHFKDEPVGRAAKEDKKSQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ost48-PA | 449 | CG9022-PA | 1..449 | 1..449 | 2294 | 100 | Plus |