BDGP Sequence Production Resources |
Search the DGRC for LD21957
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 219 |
Well: | 57 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5220-RA |
Protein status: | LD21957.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1056 |
Gene | Date | Evidence |
---|---|---|
CG5220 | 2001-01-01 | Release 2 assignment |
CG5220 | 2002-07-13 | Blastp of sequenced clone |
CG5220 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5220 | 2008-04-29 | Release 5.5 accounting |
CG5220 | 2008-08-15 | Release 5.9 accounting |
CG5220 | 2008-12-18 | 5.12 accounting |
1056 bp (1056 high quality bases) assembled on 2002-07-13
GenBank Submission: BT001481
> LD21957.complete ATGACACCATATTTTAACCATTCTTTTTACTGTTCACGTATCTCAAAAAG AACAGTTATATTGTAGAGCATCCCTGATATTTCATATATTTATTTACAAT GGGGAAAACATCAAAGGACAAACGAGATATCTATTACCGACAAGCCAAAG ACGAAGGCTGGAGGGCCAGGAGTGCCTTCAAGTTGCTCCACGTGGACGAA GCCTACGGAATTCTAAATGGTGTTCAGCGGGCAGTCGATCTGTGTGCTGC TCCTGGCAGCTGGTCCCAGGTGCTCTCTCGGAAACTCTACGATACCTGCG AAACGGACGATGAAAAGTCCGCTGTTAAGATCATAGCCGTTGATCTGCAG GCCATGGCCCCGATCCGTGGAATACTCCAGCTCCAGGGAGATATCACAAA GCAGTCGACCGCCGAAGCAATCATCGGTCACTTTGGTGGAAATGAAAAAG CCCAGCTGGTGGTCTGCGATGGAGCCCCCGATGTCACCGGGGTCCATGAA ATGGACGAGTACATGCAGCACCAGTTACTTGTGGCTGCTCTCAGCATTGC CACCTGTGTGCTGGAAACTGGCGGAACTTTTGTGGCCAAGATTTTTAAGG GAAATGCCACATCGCTATTGAGCTCCCAGATGCAGATATTTTTCAAAAAA TTCGACATCTACAAGCCACCGAGTTCGCGTCCTTCGAGCATTGAAGCTTT TGTGGTTTGCTCCGATTTTTGCCTTCCCGAGGGCTACATTCCTCAAGTGA TTAACCCTGCTCGCGATGATATACGGCTACTGGCACAGAAAACAGGGTCG GAAGTAAACCGTCGTCTAGTTCCTTTTATAGCCTGTGGAGACTTAAATGG GTTGAGTGATCCCGAAGAGGGCAAGACTTCCTCCTCAGATGAATCCAAAT CAAATTTAGAGTATGTTTACGATGCTGTTATGGACGACGCATCTTATCCC CTGGAATTTAAAGAGATTCTAAAGCAAGTCTATGATGAACAACGCCATAT TATCTAAATATTTATAAAATAAAACCAAAAAAATTAAAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5220-RA | 1183 | CG5220-RA | 78..1115 | 1..1038 | 5190 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 12865494..12866177 | 219..902 | 3420 | 100 | Plus |
chr3R | 27901430 | chr3R | 12865221..12865441 | 1..221 | 1105 | 100 | Plus |
chr3R | 27901430 | chr3R | 12866235..12866367 | 903..1035 | 665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 17041022..17041705 | 219..902 | 3420 | 100 | Plus |
3R | 32079331 | 3R | 17040749..17040969 | 1..221 | 1105 | 100 | Plus |
3R | 32079331 | 3R | 17041763..17041898 | 903..1038 | 680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 16781853..16782536 | 219..902 | 3420 | 100 | Plus |
3R | 31820162 | 3R | 16781580..16781800 | 1..221 | 1105 | 100 | Plus |
3R | 31820162 | 3R | 16782594..16782729 | 903..1038 | 680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 4219..4325 | 931..1034 | 131 | 62 | Plus |
Dbuz\ISBu3 | 993 | Dbuz\ISBu3 ISBU3 993bp | 258..298 | 1033..992 | 117 | 78.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12865221..12865439 | 1..219 | 100 | -> | Plus |
chr3R | 12865495..12866177 | 220..902 | 100 | -> | Plus |
chr3R | 12866235..12866328 | 903..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5220-RA | 1..909 | 99..1007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5220-RA | 1..909 | 99..1007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5220-RA | 1..909 | 99..1007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5220-RA | 1..909 | 99..1007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5220-RA | 1..909 | 99..1007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5220-RA | 66..1078 | 1..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5220-RA | 66..1078 | 1..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5220-RA | 68..1080 | 1..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5220-RA | 66..1078 | 1..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5220-RA | 68..1080 | 1..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17040749..17040967 | 1..219 | 100 | -> | Plus |
3R | 17041023..17041705 | 220..902 | 100 | -> | Plus |
3R | 17041763..17041873 | 903..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17040749..17040967 | 1..219 | 100 | -> | Plus |
3R | 17041023..17041705 | 220..902 | 100 | -> | Plus |
3R | 17041763..17041873 | 903..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17040749..17040967 | 1..219 | 100 | -> | Plus |
3R | 17041023..17041705 | 220..902 | 100 | -> | Plus |
3R | 17041763..17041873 | 903..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12866471..12866689 | 1..219 | 100 | -> | Plus |
arm_3R | 12866745..12867427 | 220..902 | 100 | -> | Plus |
arm_3R | 12867485..12867595 | 903..1013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16781580..16781798 | 1..219 | 100 | -> | Plus |
3R | 16781854..16782536 | 220..902 | 100 | -> | Plus |
3R | 16782594..16782704 | 903..1013 | 100 | Plus |
Translation from 98 to 1006
> LD21957.pep MGKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCA APGSWSQVLSRKLYDTCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDIT KQSTAEAIIGHFGGNEKAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSI ATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPSSRPSSIEA FVVCSDFCLPEGYIPQVINPARDDIRLLAQKTGSEVNRRLVPFIACGDLN GLSDPEEGKTSSSDESKSNLEYVYDAVMDDASYPLEFKEILKQVYDEQRH II*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17080-PA | 301 | GF17080-PA | 1..300 | 1..301 | 1370 | 85.5 | Plus |
Dana\GF23069-PA | 405 | GF23069-PA | 1..211 | 1..213 | 706 | 61.5 | Plus |
Dana\GF10393-PA | 817 | GF10393-PA | 7..203 | 1..210 | 321 | 37.1 | Plus |
Dana\GF17621-PA | 254 | GF17621-PA | 48..244 | 10..207 | 205 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21940-PA | 300 | GG21940-PA | 1..299 | 1..301 | 1517 | 95 | Plus |
Dere\GG14838-PA | 321 | GG14838-PA | 1..250 | 1..250 | 716 | 56.7 | Plus |
Dere\GG17939-PA | 816 | GG17939-PA | 7..212 | 1..219 | 326 | 36.1 | Plus |
Dere\GG23538-PA | 250 | GG23538-PA | 48..244 | 10..207 | 206 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14141-PA | 311 | GH14141-PA | 1..282 | 1..284 | 1098 | 71.3 | Plus |
Dgri\GH18555-PA | 356 | GH18555-PA | 1..246 | 1..245 | 719 | 57.6 | Plus |
Dgri\GH17878-PA | 836 | GH17878-PA | 7..212 | 1..219 | 320 | 36.1 | Plus |
Dgri\GH16178-PA | 249 | GH16178-PA | 50..246 | 10..207 | 185 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5220-PA | 302 | CG5220-PA | 1..302 | 1..302 | 1556 | 100 | Plus |
CG7009-PA | 320 | CG7009-PA | 1..213 | 1..215 | 693 | 62.8 | Plus |
CG8939-PA | 817 | CG8939-PA | 7..212 | 1..219 | 315 | 36.1 | Plus |
CG11447-PA | 250 | CG11447-PA | 48..244 | 10..207 | 200 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10674-PA | 305 | GI10674-PA | 1..291 | 1..294 | 1132 | 71.6 | Plus |
Dmoj\GI24754-PA | 382 | GI24754-PA | 1..213 | 1..215 | 699 | 60 | Plus |
Dmoj\GI16447-PA | 826 | GI16447-PA | 7..212 | 1..219 | 326 | 36.1 | Plus |
Dmoj\GI22429-PA | 254 | GI22429-PA | 50..246 | 10..207 | 188 | 28.1 | Plus |
Dmoj\GI16152-PA | 1022 | GI16152-PA | 418..602 | 47..217 | 148 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24549-PA | 304 | GL24549-PA | 1..290 | 1..288 | 1221 | 80.7 | Plus |
Dper\GL12002-PA | 316 | GL12002-PA | 1..253 | 1..251 | 727 | 58.4 | Plus |
Dper\GL12202-PA | 249 | GL12202-PA | 47..243 | 10..207 | 201 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18746-PA | 304 | GA18746-PA | 1..290 | 1..288 | 1221 | 80.7 | Plus |
Dpse\GA20027-PA | 316 | GA20027-PA | 1..253 | 1..251 | 730 | 58.8 | Plus |
Dpse\GA23223-PA | 232 | GA23223-PA | 1..169 | 86..251 | 421 | 54.1 | Plus |
Dpse\GA11008-PA | 249 | GA11008-PA | 47..243 | 10..207 | 201 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15199-PA | 302 | GM15199-PA | 1..301 | 1..301 | 1553 | 96.7 | Plus |
Dsec\GM15097-PA | 321 | GM15097-PA | 1..213 | 1..215 | 716 | 61.9 | Plus |
Dsec\GM11680-PA | 817 | GM11680-PA | 7..212 | 1..219 | 326 | 36.1 | Plus |
Dsec\GM26867-PA | 250 | GM26867-PA | 48..244 | 10..207 | 204 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19132-PA | 302 | GD19132-PA | 1..301 | 1..301 | 1555 | 97 | Plus |
Dsim\GD17262-PA | 204 | GD17262-PA | 7..182 | 1..189 | 273 | 36.5 | Plus |
Dsim\GD19317-PA | 250 | GD19317-PA | 48..244 | 10..207 | 204 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23026-PA | 313 | GJ23026-PA | 1..295 | 1..295 | 1195 | 75.8 | Plus |
Dvir\GJ22540-PA | 316 | GJ22540-PA | 1..213 | 1..215 | 717 | 63.3 | Plus |
Dvir\GJ15847-PA | 831 | GJ15847-PA | 7..212 | 1..219 | 323 | 35.6 | Plus |
Dvir\GJ10992-PA | 254 | GJ10992-PA | 50..249 | 10..210 | 178 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16249-PA | 306 | GK16249-PA | 1..300 | 1..298 | 1178 | 73.3 | Plus |
Dwil\GK22383-PA | 305 | GK22383-PA | 1..251 | 1..251 | 708 | 56 | Plus |
Dwil\GK19748-PA | 824 | GK19748-PA | 7..212 | 1..219 | 332 | 36.1 | Plus |
Dwil\GK22358-PA | 249 | GK22358-PA | 50..246 | 10..207 | 193 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24604-PA | 302 | GE24604-PA | 1..301 | 1..301 | 1549 | 96.3 | Plus |
Dyak\GE25011-PA | 318 | GE25011-PA | 1..250 | 1..250 | 725 | 56.7 | Plus |
Dyak\GE17245-PA | 819 | GE17245-PA | 7..212 | 1..219 | 328 | 36.1 | Plus |
Dyak\GE11211-PA | 250 | GE11211-PA | 48..244 | 10..207 | 200 | 29.5 | Plus |
Dyak\GE25629-PA | 250 | GE25629-PA | 48..244 | 10..207 | 200 | 29.5 | Plus |
Translation from 98 to 1006
> LD21957.hyp MGKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCA APGSWSQVLSRKLYDTCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDIT KQSTAEAIIGHFGGNEKAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSI ATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPSSRPSSIEA FVVCSDFCLPEGYIPQVINPARDDIRLLAQKTGSEVNRRLVPFIACGDLN GLSDPEEGKTSSSDESKSNLEYVYDAVMDDASYPLEFKEILKQVYDEQRH II*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5220-PA | 302 | CG5220-PA | 1..302 | 1..302 | 1556 | 100 | Plus |
CG7009-PA | 320 | CG7009-PA | 1..213 | 1..215 | 693 | 62.8 | Plus |
CG8939-PA | 817 | CG8939-PA | 7..212 | 1..219 | 315 | 36.1 | Plus |
CG11447-PA | 250 | CG11447-PA | 48..244 | 10..207 | 200 | 28.8 | Plus |