Clone LD22004 Report

Search the DGRC for LD22004

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:220
Well:4
Vector:pOT2
Associated Gene/TranscriptNrt-RA
Protein status:LD22004.pep: gold
Preliminary Size:4355
Sequenced Size:3518

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9704 2000-02-14 Blastp of sequenced clone
CG9704 2001-01-01 Release 2 assignment
CG9704 2003-01-01 Sim4 clustering to Release 3
Nrt 2008-04-29 Release 5.5 accounting
Nrt 2008-08-15 Release 5.9 accounting
Nrt 2008-12-18 5.12 accounting

Clone Sequence Records

LD22004.complete Sequence

3518 bp (3518 high quality bases) assembled on 2000-02-14

GenBank Submission: AF132188

> LD22004.complete
GAAGCCGCACGCGTTTTCCCTCGCTCCGGTTGTGCTCGCTTTCGCATCGC
ACACACACACACACTCTCGCCGCACAGACGCGACCAAAAGAAAACAAAAT
CAAATTCGGCGCAAACAAGGAATAACTTTTTATATTCCTATTGTGCATCG
TATGTTGTATTAAGTGCAAGAAATATATTTACACAAATCTAACAAAAACA
CCGCAACTACTTTTGTGCATTTTGTTTTGCTCTGTGCCGAAGGAGCGGAG
AAAAGAAAAAACCGCAACAAATCAAAAAATCTGTGCGTTTGTTATACACA
CCTAAGTGTCCTGCAGGAAGGACATCGGGTTCATTTACGCCACCCGCTGT
TTTCAAGGACCAACGGATTATTCCCAATTGCCACATTTCAACAAGTTCGA
AAAAAGCAACACACATTTTACACAGTGTTTGCGAGAATTGAAAAAGAATT
CTCGCAGAGTTCTCTAAACGATCTTGATTCATCGACAATATGGGCGAACT
CGAGGAGAAGGAAACCCCGCCCACTGAGACGACAGCCGCCCAGCAAGAGG
CGCTAGAGGAGCCCAAGGAAACGGACAAAATGTTGGACAAAAAAGAGGAC
GCCAAGGAGAAGACACCCAGTCCACAGACCTCCAAGCCCGCATCTCCAAA
TGCCGGCAAGAAATCCTCACCAGTGGCCGAGAAAAAGATCGACGATGCTG
AATTAGCGAAATCCAAATCAGGCAATGGAGAAGAGATTATCGATATTCCC
GCCGAGAATGGCACAAAGCCAGACAGCGCTGATGACAAAAAGATAAGCAA
GGAGGAGCGCGAGGTCAAGCCCAAAAAGATACCGATCGGAGGTCTCAAAC
TGCCTGGTTTCTTCATGAAGAACAAGCCGAAGGCAGATGGTGATGGGGCC
GAGGGCGAGCTGCTCGAAAAGGAGAAGGAAGAGGATAAGGATAAGGAAGC
CAATGGAGATGCCGCCACCGGTTCCGGCAAGGACGAACAGAAATCTCGCC
CAGGACTGGGAGAACGCCTGCGCAGCTTCTTTGCCCGCAAGCCATCCGCC
GAAAAGGAAAAGAAGCAGCTGGTCAACGGTGACGCGGATGCCAAGTCTGA
AGCCACAGCTGAAGCAACGCCCGCTGAAGATGCCTCCGATGCACCACCAA
AGCGTGGACTTTTGAACGCCATCAAGCTGCCAATCGCTAACATGATACCG
AAAAAGAAGAGCAACGATGATGTGGAGCTGGGCTTGGGCAAGGCCGGTCT
GGCCTCGATGGAGACCCTCGATGATTCCCTTAAGGATCAAGACACAGTGG
ATCGGGCTCCCGTCAAGACCAACGGTACCGAGGAACTAAAGGGCGAGCTA
AAGGATGAGAAGCTGGCGGCGGAGGAAAAACTAGCCGCCGAGGAGGAGGA
GCAAAACCGACCCGTCTCCTTGCTAACCCGTCTGCGTGGCTACAAGTGCA
GTGTGGACGATGCCCTGATTGTGTTTGGCATCCTGCTATTTGTGCTCCTG
TTGGGCGTGATTGGTTATGTACTAACCCACGAGACTTTGACCTCGCCGCC
GCTGCGGGAAGGACGCTACATAATGGCAGTGACGGGGTGCGGACCTGTGG
AGGGCGTTAAGGAAGATGGAGCCTTTGCCTTCCGTGGCATTCCGTATGCA
AAGCCACCCGTAGACAGACTGAGATGGAAGCCGGCTGAACTGATTGATGA
CATCAATATGTGCTGGAATGATACACTGCAAACCCATAACAGCAGTGTGG
TGTGCACGCAGCGATTGGGCAATGGCACCACAGTTGGCGACGAGGATTGT
CTATACCTTGACGTGGTTACTCCCCATGTGCGGTACAATAACCCCTTGCC
TGTGGTCGTCCTGATCGGAGCAGAATCTTTGGCTGGTCCTTCGCCGGGTA
TTCTCCGTCCATCGGCTCGCTATTCTCGATCGCACGATGTGATCTTTGTG
CGTCCCAATTTCCGTTTGGGTGTCTTCGGCTTCCTAGCCCTCGACGCTCT
GACCAAGGAGGCACACCCGCCAACTTCGGGCAACTATGCGCTCACCGACA
TCATTGCCGTGCTGAACTGGATCAAGTTGAACATCGTACATTTTGGTGGC
GACCCGCAATCCGTCACCCTGCTGGGTCATCGGGCCGGAGCCACTCTGGT
GACTCTTCTAGTTAACTCACAAAAGGTCAAGGGTCTGTACACCAGGGCCT
GGGCATCATCTGGATCAGCAATTCTGCCTGGTAAACCATTGAGCGAGTCT
GGTAAACAAAACGAGCAGCTGATGGCCACCCTCGAGTGTGCTGATATCCA
GTGCCTGCGTGAAGCGTCCAGCGAACGACTTTGGGCCGCCACTCCCGACA
CCTGGCTGCACTTCCCCGTGGATCTGCCGCAGCCGCAGGAGGCGAATGCC
AGCGGTAGCCGTCACGAATGGTTGGTTCTCGATGGAGATGTGGTCTTTGA
ACATCCTTCCGATACCTGGAAGCGCGAACAGGCCAACGACAAGCCGGTGC
TGGTTATGGGCGCCACGGCGCATGAGGCGCACACCGAGAAACTGCGCGAA
TTGCATGCGAACTGGACGCGAGAGGAGGTGCGTGCCTATCTGGAAAACTC
CCAGATTGGAGCATTGGGCCTCACCGACGAGGTTATCGAGAAGTACAACG
CCAGCAGCTATGCGTCGCTGGTTTCTATCATTTCGGACATTCGCAGCGTT
TGCCCGCTGCTGACGAATGCGAGACAGCAGCCCAGTGTGCCGTTCTATGT
TGTCACCCAAGGCGAGGGACCCGATCAGCTGGCCACGGTGGACGCCGATG
TCCAGGCCATTCTCGGCCGCTATGAGCCGCACACCGTAGAGCAGCGCCGC
TTCGTTTCGGCCATGCAGCAGCTGTTCTACTACTATGTCTCGCACGGCAC
GGTGCAGTCGTTTGTCCAGAACCGCCGGGTCATCAATGTTGGCCAGGATG
CGCAGCCGGAAGAGGACTACTTGCCCTGCAACTACTGGATCAGCAAGGAT
ATTGTGCCGCGGTATGCGCGCGTCGATTAAGCAAACCAAAATCCCAACAG
ATAGGCCCTCGCTTCTAAACTTTTTCACCTGTATTGGTCCGCCTGGGATC
GATTATCTCATTCGGCTTTGTTGCGCCTTCGGTTTCTATTAAACTTAAAG
TTATCTGGAATATTTCGAAAATTTAAAAATACTTTAGCCATTGGATTTTT
AAGTAATAATCGATTTCTTTAAATTTAATACGAACCGATTACCTAATCAA
AGCTTAATACTTCCCGACTTCGTTTCGTGTTTAGTTTAGCATAAGTTAAT
CTAATGTTTATATATATATAAATATATGTGTAACGGATATTTAGTTCTCT
TAAAGTTTAAGTTGAAAGTCTTAAGTTATGCTGACTCCATACGTTTCTTC
ATACGAGTACGTATTCTCTAATCTTAACATTAACGAACACATAAACACAC
AGACACAAACAGCAAAAACACAAATAAAACATCACAAAATATACAAAATT
AAAAAAAAAAAAAAAAAA

LD22004.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:42:09
Subject Length Description Subject Range Query Range Score Percent Strand
Nrt-RB 4335 Nrt-RB 88..3588 1..3501 17505 100 Plus
Nrt-RA 3986 Nrt-RA 182..3239 444..3501 15290 100 Plus
Nrt.a 3920 Nrt.a 119..3173 444..3501 15220 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:23:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 16764018..16766419 1099..3500 11860 99.6 Plus
chr3L 24539361 chr3L 16763301..16763955 445..1099 3260 99.8 Plus
chr3L 24539361 chr3L 16755718..16756163 1..446 2200 99.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:10:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:23:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16774429..16776831 1099..3501 12015 100 Plus
3L 28110227 3L 16773712..16774366 445..1099 3275 100 Plus
3L 28110227 3L 16766095..16766540 1..446 2230 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 16767529..16769931 1099..3501 12015 100 Plus
3L 28103327 3L 16766812..16767466 445..1099 3275 100 Plus
3L 28103327 3L 16759195..16759640 1..446 2230 100 Plus
Blast to na_te.dros performed on 2019-03-15 22:23:26 has no hits.

LD22004.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:24:33 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 16755718..16756163 1..446 99 -> Plus
chr3L 16763303..16763955 447..1099 99 -> Plus
chr3L 16764019..16766419 1100..3500 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:31:03 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
Nrt-RA 1..2541 490..3030 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:35:09 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
Nrt-RC 1..2541 490..3030 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:17:34 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
Nrt-RB 1..2541 490..3030 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:10:54 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
Nrt-RA 1..2541 490..3030 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:20:24 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
Nrt-RB 1..2541 490..3030 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:31:03 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
Nrt-RB 22..3521 1..3500 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:35:09 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
Nrt-RB 22..3521 1..3500 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:17:34 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
Nrt-RB 24..3523 1..3500 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:10:54 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
Nrt-RB 22..3521 1..3500 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:20:24 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
Nrt-RB 24..3523 1..3500 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:24:33 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16774430..16776830 1100..3500 100   Plus
3L 16766095..16766540 1..446 100 -> Plus
3L 16773714..16774366 447..1099 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:24:33 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16774430..16776830 1100..3500 100   Plus
3L 16766095..16766540 1..446 100 -> Plus
3L 16773714..16774366 447..1099 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:24:33 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16774430..16776830 1100..3500 100   Plus
3L 16766095..16766540 1..446 100 -> Plus
3L 16773714..16774366 447..1099 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:17:34 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16759195..16759640 1..446 100 -> Plus
arm_3L 16766814..16767466 447..1099 100 -> Plus
arm_3L 16767530..16769930 1100..3500 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:47:24 Download gff for LD22004.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16759195..16759640 1..446 100 -> Plus
3L 16766814..16767466 447..1099 100 -> Plus
3L 16767530..16769930 1100..3500 100   Plus

LD22004.pep Sequence

Translation from 489 to 3029

> LD22004.pep
MGELEEKETPPTETTAAQQEALEEPKETDKMLDKKEDAKEKTPSPQTSKP
ASPNAGKKSSPVAEKKIDDAELAKSKSGNGEEIIDIPAENGTKPDSADDK
KISKEEREVKPKKIPIGGLKLPGFFMKNKPKADGDGAEGELLEKEKEEDK
DKEANGDAATGSGKDEQKSRPGLGERLRSFFARKPSAEKEKKQLVNGDAD
AKSEATAEATPAEDASDAPPKRGLLNAIKLPIANMIPKKKSNDDVELGLG
KAGLASMETLDDSLKDQDTVDRAPVKTNGTEELKGELKDEKLAAEEKLAA
EEEEQNRPVSLLTRLRGYKCSVDDALIVFGILLFVLLLGVIGYVLTHETL
TSPPLREGRYIMAVTGCGPVEGVKEDGAFAFRGIPYAKPPVDRLRWKPAE
LIDDINMCWNDTLQTHNSSVVCTQRLGNGTTVGDEDCLYLDVVTPHVRYN
NPLPVVVLIGAESLAGPSPGILRPSARYSRSHDVIFVRPNFRLGVFGFLA
LDALTKEAHPPTSGNYALTDIIAVLNWIKLNIVHFGGDPQSVTLLGHRAG
ATLVTLLVNSQKVKGLYTRAWASSGSAILPGKPLSESGKQNEQLMATLEC
ADIQCLREASSERLWAATPDTWLHFPVDLPQPQEANASGSRHEWLVLDGD
VVFEHPSDTWKREQANDKPVLVMGATAHEAHTEKLRELHANWTREEVRAY
LENSQIGALGLTDEVIEKYNASSYASLVSIISDIRSVCPLLTNARQQPSV
PFYVVTQGEGPDQLATVDADVQAILGRYEPHTVEQRRFVSAMQQLFYYYV
SHGTVQSFVQNRRVINVGQDAQPEEDYLPCNYWISKDIVPRYARVD*

LD22004.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:47:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23930-PA 844 GF23930-PA 1..844 1..846 3708 88.2 Plus
Dana\GF21896-PA 577 GF21896-PA 7..321 334..644 338 34 Plus
Dana\GF11899-PA 566 GF11899-PA 57..249 379..578 322 37.6 Plus
Dana\GF17291-PA 565 GF17291-PA 40..247 368..576 308 35 Plus
Dana\GF17678-PA 566 GF17678-PA 13..249 341..578 296 33.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:47:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13576-PA 846 GG13576-PA 1..846 1..846 4406 97.8 Plus
Dere\GG24018-PA 648 GG24018-PA 135..429 379..679 340 35.2 Plus
Dere\GG14130-PA 566 GG14130-PA 27..249 355..578 307 34.3 Plus
Dere\GG18565-PA 583 GG18565-PA 55..302 380..623 300 33 Plus
Dere\GG25127-PA 572 GG25127-PA 33..250 361..580 299 36.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:47:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16222-PA 851 GH16222-PA 1..851 1..846 3390 76.9 Plus
Dgri\GH11055-PA 590 GH11055-PA 71..299 379..607 321 39 Plus
Dgri\GH18314-PA 566 GH18314-PA 13..249 341..578 316 34.1 Plus
Dgri\GH20757-PA 643 GH20757-PA 86..486 355..716 313 29.2 Plus
Dgri\GH22069-PA 507 GH22069-PA 39..275 372..609 309 35.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:37
Subject Length Description Subject Range Query Range Score Percent Strand
Nrt-PC 846 CG9704-PC 1..846 1..846 4387 100 Plus
Nrt-PA 846 CG9704-PA 1..846 1..846 4387 100 Plus
Nrt-PB 846 CG9704-PB 1..846 1..846 4387 100 Plus
CG4382-PB 580 CG4382-PB 67..361 379..679 328 34.7 Plus
CG10175-PE 644 CG10175-PE 85..426 355..680 309 28.9 Plus
CG10175-PA 644 CG10175-PA 85..426 355..680 309 28.9 Plus
CG10175-PC 659 CG10175-PC 100..441 355..680 309 28.9 Plus
CG10175-PD 707 CG10175-PD 148..489 355..680 309 28.9 Plus
alpha-Est2-PB 566 CG2505-PB 27..249 355..578 306 34.8 Plus
alpha-Est2-PA 566 CG2505-PA 27..249 355..578 306 34.8 Plus
CG6414-PB 583 CG6414-PB 55..302 380..623 300 33 Plus
CG6414-PA 583 CG6414-PA 55..302 380..623 300 33 Plus
gas-PA 566 CG6018-PA 57..249 379..578 295 35.1 Plus
alpha-Est6-PA 568 CG1108-PA 55..259 370..580 295 35.8 Plus
alpha-Est8-PA 574 CG1121-PA 27..250 355..580 294 34.7 Plus
Jhe-PB 579 CG8425-PB 47..284 370..617 287 34.4 Plus
Jhe-PC 579 CG8425-PC 47..284 370..617 287 34.4 Plus
Jhe-PA 579 CG8425-PA 47..284 370..617 287 34.4 Plus
alpha-Est9-PC 569 CG1128-PC 36..249 365..580 281 33.2 Plus
alpha-Est1-PA 565 CG1031-PA 53..247 375..576 278 34.6 Plus
CG3841-PB 564 CG3841-PB 52..370 379..707 275 28.4 Plus
CG3841-PA 564 CG3841-PA 52..370 379..707 275 28.4 Plus
CG10175-PB 524 CG10175-PB 3..306 386..680 270 28.6 Plus
alpha-Est10-PD 550 CG1131-PD 17..235 360..580 270 34.1 Plus
alpha-Est10-PB 567 CG1131-PB 34..252 360..580 270 34.1 Plus
alpha-Est10-PC 581 CG1131-PC 48..266 360..580 270 34.1 Plus
Jhedup-PA 559 CG8424-PA 39..258 375..594 269 35.1 Plus
alpha-Est7-PA 572 CG1112-PA 33..250 361..580 263 32.9 Plus
alpha-Est5-PA 542 CG1089-PA 17..223 368..576 256 32.3 Plus
alpha-Est5-PB 543 CG1089-PB 18..224 368..576 256 32.3 Plus
Nlg3-PB 1159 CG34127-PB 172..524 370..665 254 28.3 Plus
Nlg3-PC 1159 CG34127-PC 172..524 370..665 254 28.3 Plus
Nlg2-PC 1248 CG13772-PC 205..432 380..580 253 35.3 Plus
Nlg2-PB 1248 CG13772-PB 205..432 380..580 253 35.3 Plus
Nlg2-PA 1248 CG13772-PA 205..432 380..580 253 35.3 Plus
alpha-Est9-PD 587 CG1128-PD 36..267 365..580 252 30.7 Plus
Nlg4-PE 1280 CG34139-PE 70..286 381..577 252 36.6 Plus
Nlg4-PC 1280 CG34139-PC 70..286 381..577 252 36.6 Plus
Nlg4-PB 1280 CG34139-PB 70..286 381..577 252 36.6 Plus
Nlg4-PD 1281 CG34139-PD 70..286 381..577 252 36.6 Plus
alpha-Est4-PA 541 CG1082-PA 24..221 370..575 248 31.4 Plus
CG12869-PC 685 CG12869-PC 53..246 379..566 247 34.3 Plus
CG12869-PB 685 CG12869-PB 53..246 379..566 247 34.3 Plus
CG12869-PA 685 CG12869-PA 53..246 379..566 247 34.3 Plus
Nlg1-PE 1354 CG31146-PE 184..418 381..600 244 33.5 Plus
Nlg1-PD 1354 CG31146-PD 184..418 381..600 244 33.5 Plus
Est-Q-PA 559 CG7529-PA 64..304 376..618 243 29.8 Plus
Est-6-PB 544 CG6917-PB 35..241 368..580 241 32.1 Plus
Est-6-PA 544 CG6917-PA 35..241 368..580 241 32.1 Plus
CG4757-PB 550 CG4757-PB 45..261 380..612 241 34 Plus
CG4757-PA 550 CG4757-PA 45..261 380..612 241 34 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:47:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13369-PA 852 GI13369-PA 1..852 1..846 3361 77.6 Plus
Dmoj\GI21011-PA 566 GI21011-PA 37..249 365..578 322 34.7 Plus
Dmoj\GI17573-PA 590 GI17573-PA 71..300 379..608 321 39.7 Plus
Dmoj\GI16153-PA 594 GI16153-PA 55..351 380..680 307 32.2 Plus
Dmoj\GI10706-PA 643 GI10706-PA 86..425 355..680 303 30.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:47:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20689-PA 363 GL20689-PA 54..363 536..846 1411 82 Plus
Dper\GL19217-PA 561 GL19217-PA 69..310 379..631 326 38.3 Plus
Dper\GL13845-PA 754 GL13845-PA 194..597 355..716 297 27.9 Plus
Dper\GL12447-PA 566 GL12447-PA 53..249 375..578 295 35.9 Plus
Dper\GL11587-PA 566 GL11587-PA 58..249 380..578 292 35 Plus
Dper\GL20689-PA 363 GL20689-PA 1..60 1..62 246 83.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:47:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21977-PA 845 GA21977-PA 1..845 1..846 3584 81.6 Plus
Dpse\GA18147-PA 582 GA18147-PA 69..310 379..631 326 38.3 Plus
Dpse\GA10746-PA 575 GA10746-PA 50..253 372..580 300 37.7 Plus
Dpse\GA15379-PA 566 GA15379-PA 53..249 375..578 295 35.9 Plus
Dpse\GA19574-PA 582 GA19574-PA 52..300 380..623 294 33 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:47:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25656-PA 846 GM25656-PA 1..846 1..846 4477 99.5 Plus
Dsec\GM12374-PA 579 GM12374-PA 66..320 379..644 340 37.1 Plus
Dsec\GM10966-PA 566 GM10966-PA 27..249 355..578 309 34.9 Plus
Dsec\GM12707-PA 583 GM12707-PA 55..302 380..623 308 33 Plus
Dsec\GM10473-PA 568 GM10473-PA 57..259 372..580 299 36.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:47:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14662-PA 529 GD14662-PA 1..525 1..525 2730 99.6 Plus
Dsim\GD14663-PA 262 GD14663-PA 1..262 579..846 1341 92.5 Plus
Dsim\GD22348-PA 675 GD22348-PA 162..416 379..644 338 37.1 Plus
Dsim\GD19941-PA 566 GD19941-PA 27..249 355..578 312 35.3 Plus
Dsim\GD11676-PA 566 GD11676-PA 57..249 379..578 302 36.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:47:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13198-PA 842 GJ13198-PA 1..842 1..846 3477 78.9 Plus
Dvir\GJ17915-PA 582 GJ17915-PA 63..291 379..607 318 38 Plus
Dvir\GJ16431-PA 589 GJ16431-PA 51..298 380..623 317 34.1 Plus
Dvir\GJ23121-PA 643 GJ23121-PA 86..486 355..716 305 28.8 Plus
Dvir\GJ10947-PA 566 GJ10947-PA 27..249 355..578 301 33.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:47:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25299-PA 859 GK25299-PA 19..859 14..846 3480 77.7 Plus
Dwil\GK23807-PA 587 GK23807-PA 68..309 379..631 317 36.5 Plus
Dwil\GK22160-PA 565 GK22160-PA 57..249 379..578 316 36.1 Plus
Dwil\GK11069-PA 565 GK11069-PA 30..249 356..578 311 35 Plus
Dwil\GK22397-PA 576 GK22397-PA 34..251 361..580 302 37.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:47:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19873-PA 846 GE19873-PA 1..846 1..846 4385 97.3 Plus
Dyak\GE10446-PA 580 GE10446-PA 67..321 379..644 338 37.1 Plus
Dyak\GE11113-PA 565 GE11113-PA 53..249 375..578 305 35.7 Plus
Dyak\GE11183-PA 566 GE11183-PA 57..249 379..578 303 36.6 Plus
Dyak\GE16876-PA 575 GE16876-PA 55..302 380..623 303 32.2 Plus

LD22004.hyp Sequence

Translation from 489 to 3029

> LD22004.hyp
MGELEEKETPPTETTAAQQEALEEPKETDKMLDKKEDAKEKTPSPQTSKP
ASPNAGKKSSPVAEKKIDDAELAKSKSGNGEEIIDIPAENGTKPDSADDK
KISKEEREVKPKKIPIGGLKLPGFFMKNKPKADGDGAEGELLEKEKEEDK
DKEANGDAATGSGKDEQKSRPGLGERLRSFFARKPSAEKEKKQLVNGDAD
AKSEATAEATPAEDASDAPPKRGLLNAIKLPIANMIPKKKSNDDVELGLG
KAGLASMETLDDSLKDQDTVDRAPVKTNGTEELKGELKDEKLAAEEKLAA
EEEEQNRPVSLLTRLRGYKCSVDDALIVFGILLFVLLLGVIGYVLTHETL
TSPPLREGRYIMAVTGCGPVEGVKEDGAFAFRGIPYAKPPVDRLRWKPAE
LIDDINMCWNDTLQTHNSSVVCTQRLGNGTTVGDEDCLYLDVVTPHVRYN
NPLPVVVLIGAESLAGPSPGILRPSARYSRSHDVIFVRPNFRLGVFGFLA
LDALTKEAHPPTSGNYALTDIIAVLNWIKLNIVHFGGDPQSVTLLGHRAG
ATLVTLLVNSQKVKGLYTRAWASSGSAILPGKPLSESGKQNEQLMATLEC
ADIQCLREASSERLWAATPDTWLHFPVDLPQPQEANASGSRHEWLVLDGD
VVFEHPSDTWKREQANDKPVLVMGATAHEAHTEKLRELHANWTREEVRAY
LENSQIGALGLTDEVIEKYNASSYASLVSIISDIRSVCPLLTNARQQPSV
PFYVVTQGEGPDQLATVDADVQAILGRYEPHTVEQRRFVSAMQQLFYYYV
SHGTVQSFVQNRRVINVGQDAQPEEDYLPCNYWISKDIVPRYARVD*

LD22004.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:02:51
Subject Length Description Subject Range Query Range Score Percent Strand
Nrt-PC 846 CG9704-PC 1..846 1..846 4387 100 Plus
Nrt-PA 846 CG9704-PA 1..846 1..846 4387 100 Plus
Nrt-PB 846 CG9704-PB 1..846 1..846 4387 100 Plus
CG4382-PB 580 CG4382-PB 67..361 379..679 328 34.7 Plus
CG10175-PE 644 CG10175-PE 85..426 355..680 309 28.9 Plus