Clone LD22218 Report

Search the DGRC for LD22218

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:222
Well:18
Vector:pOT2
Associated Gene/TranscriptRif1-RA
Protein status:LD22218.pep: gold
Sequenced Size:4601

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30085 2000-02-14 Blastp of sequenced clone
CG30085 2003-01-01 Sim4 clustering to Release 3
CG30085 2008-04-29 Release 5.5 accounting
CG30085 2008-08-15 Release 5.9 accounting
CG30085 2008-12-18 5.12 accounting

Clone Sequence Records

LD22218.complete Sequence

4601 bp (4601 high quality bases) assembled on 2000-02-14

GenBank Submission: AF132192

> LD22218.complete
CAATTCGCGCGCTTTTTTCTTCGACAGTCTTTAAAACTGCGGGAAAATAA
CTTGTGGCGTTCGCAGGCGGAAGAAAATAATATAATTAAATAAGCGTATC
ATCCAGCGTACGAGCCATGGATGTAGACTTCGGCGCGCAGGCGGGGCAGT
CCTACCGCACGGTGCAGCTTTCCGCGAAAGAAGTGCTCGCTGCTGGCCGC
CGTCAGCATTATTGCAACATGATCGACTTGTTGGCCAGCAGCTGCAAAAG
CTCCGGTTTGATAGCCACTTCCTTTACGGATGACGAACTGGTGGAGTTCT
GGCTGGGAGATATCCTGCCGCTTATGTTCGATGCGGACCGAAAGATCCAG
GACTGTGCCGTGGCAGCTCTTGCGGAGGCACTGGTGGCTCTTGACGTGTC
CGTTATCCACTCGGCCAAGTGCTGGCCTCAGATCCGCAGTGAATTTGTCG
ACAAATACACCATCATCATCGGGGAGATGCGCGATGCTAAGAACTCCAAC
TGGCACAAAATATGGACGCTGCTGGTACAAATCATGGACGAGGATTTGCT
CAGGGGCTGTGTATATATCAACAAATTCTTGGCTCTGGTTGAATTGGGCT
TCCGCAACCCGGATAATGGTGTGCGGTCGGAGGCATTTCTTTGCTGGCGC
GTGCTCATCAAGATCTTTGCCGCCTACGACGAACTGACATCCGCGAAGAG
GCTTCGTTTGCTGCTGATCCCCCTGCGCACTTCACAATCGCGATCCTCGC
ACGTGAGTGGCATCAAGTTGCGAGTGTGGTGGTATCTGCTCAGCTGCCTG
GACCACGAGTTACCCAAGTCTTTTGACAGCGCCGTGGAGCACTTTTTGGC
TTTTATGCTAGGCGGAGGTCCACGAAATCTGGCTACGGGTCTGGCGCACA
ACTACCAGACGGCTCGGGAGTTGGCCCTGCCCTGCCTTGTGGCCCTTTGG
GGCGTGGAGTCCAGTGAACCGTTGCAGCGTCTAATGAGAGAGCTACGCTT
GGAGACCTTGGTCCAGCCCTCGCCTCTGATGAGCGTAGAGGTATTCCAAC
AGCATTGGAAACCTCTTTTGGCCGCTGCCGTTTCCGGTTTAAAGTTGCTT
ACCGAGAACGATGCCACAGAAGCGGAACAACTCCTGCTGCAGTTGCTCGT
GCGGAATCTGTGCCTTGCCATGTTTCGGTTGGCAGTTGCTCCCTTCAATG
TGGCGTGCTGCAGTGAAATCGAGAAAATCCTGCAGGCTGAAGATAACTCC
GGTGGCCGAGTTGTACGCGCTCTTTTCAATACCATAGCCGCAGATAACTT
GGTAATGGAGCGTGTGTCTGGAAGCGACCATCTTGATGTTCTGGAGGCCT
ACTTGAAACTTGTACTGAAATCCAAGACAGAAGTTCCGGCAGCAATTCTG
CAGCGAAGTATCGCATGCATTTTCGCAGTCGATCGTATCGAGGCGAACAA
TCAGAACGAGTTCCGGATGCTGGGCTCCTTCGCTGAGCTTCTGATGCAGG
CCAACGACGAAGAGGACTTTGAGGGATTCGCATTCAAGCTGCAGGTGTGG
CGACAGGTGTCGCAGGCGTTGTCCAACTATCTGCGAAACAATGCGCTTGA
ATACCGTGTGGCACACAACGCTTCCCTTTTGGACACTTGGCTTTTATGGC
CACTTCAGACACTGGCTGCCTTTGCGGGACGGCGTGCTAGCAACTCCTTC
GATGCCTCTTTTTGCGATCAATGGCGCCAACTGGTAAACGCAGGCCAAAA
CGCGCCGGGGAGGAAGAAGTTCTTGACGGACCTGAAAGCCACACTTACAG
ACCTCCTAAAGAGCAAGGATGAACCGCTCTTTGCAGAGCTCTTCGATGCT
TATGTGACCTCCTTAATCAAGTTTGGACTCTGTAAGGAGGCACCTTTGTA
TAAGGACGTTTTTGGGCTACTTCAAACCATTTTCGAGCAGCCCTCCTCCC
AGAAAACGCTCGAAGCCTGTTTAAACACCCTCCGCAACCTGGTGGTGGAG
TTGCGGCAAAACGAACTAATGGTAGTGTTCGATTCATTGAAACCAACATT
GTCTTCTGGCATCCAGTGCTGGAATAAGATGAAGTGCGAAGGCGGATTCT
TGGAGGAGTGGAAGCGGGGAATTCAAGAAAAGTTTCGCAAGCTACCCATG
AAGACGATGGCCAATCAGCTCAAAGAACTCTTTAAGGCAGATGATCTCTT
CGTGATCATCCCATCAGTGTGGAGTCTGAATCCAGAGAAGCTGACGGATC
GTCAAAAGGAGCGCTTCGCTGAAAAGTCGGACATTCCAGCTCTGTACAAT
GATATGTCGCAGTCTCAGGACTCGGCTTCCATTAAGCCCTGGACCCCTAA
GAAGGTGGTTATTGCAAAGAGCAAACAGGGTGAGCTGGCCTTAACCGGCA
AGGATGACAACGGCGAGGTGATCGATATAACGGCCAGCGAGGAGTCTGAG
AAGGAACCAGTGAGAGTTGACGTAGTTACACCCATCCGAAAGAAACCGGG
GCGTAAGTCCCAAGCTCAAAAAGAACTCGAGGCCGCTGCCAGGGCTGCTT
CTCTTGCCGAGGAGCCGCCAAAGCGTCAGACGCGAACACGGGCGGCTCAA
AAAGAAACGGAACAGGTGGCTCAGCCACAGCCAGCGTTTGAACCACAGCT
CAGATCGCCAAAGAAATTGCCACCGTCCCCGGTCGTTCAATCTACAGCAG
CTGCCGTTAAGCAGGCAAAGGTTGCAAAACCCACCCCCGTTGTGGTAATC
GCGCAGAGCGAGGATCTTTTCCCGGAAGTCGCAGCTGAGCCAGAGCCTCA
GCCAGAACCGGTTAAGAAACCCGACCCTGTTCCAGAAACAACACAACTGA
CCCCGCCTGATGTACCCTTGGAAGCTGTACCCTCTACCCAACTGCCTGGA
AGCAGCGGAGATCCTGCCGCTTCTGCGGGGGCTGTGGCTGCCGGTGAGAT
GTCTCCAAAGAAATCAGGCACGCGAATATACAATTTGAGCTCTCCACCTG
ATCGCAAGCAGACAAACAACTCCTCGAGTCCAACATTGCGGCCCAAGCCC
ACGGGACATCTGACTGGACGCGGTGCTCAGTTGATCAATATGATTCGCAA
CAAGAAGCTGGACGCTGCTTCCGGCTCGCCGTATGCGTGCATGTCTACTT
CGCGCCTGGTTCACCAAGTGACGCCGGCCCGTGCCCAGGATCGCGCCGAG
CAGGTGTCCACTCCCACCAGCGAGCTAAACGAGCTGACGGGCACGGATCA
CACTTCCACACCGATTCAGGCACCTCCCTCGAAGGATCTATTGGTGTTTT
CCAAACGACTGCCATCCCCATCGGCCAGTCCCTCCGTAAGCATCTTGAAG
CGCAAGCTACGATGCGAAAGTCTCGATGATGTTACTCTGGACTCGCCGGC
TCTAAAGCGTAAGCGAGTTAGTTTCCACGACCCACCGGTGTCCGTCACCA
AGGAGTATCTACGCGATGCTGAGGAGACGCGCAGCAGTTTGAAGCCCAAA
CGCTGTCTGCTTATGGACAAGGTGGCCCAGACCACCGAGATGCGCCAGGC
GTTGAGGAGACGTGGTCGGTTAGACAGCATAATCGAAATAGAGCGTTTCG
CTAGCGAACAGACGGCCAGAACAGCGACGACGGACAAGAGCCTGGACAAA
TCCACTGGCGAAGCACCCGAGGAGGATGCTTTCACCAGCTTAAAGTGGAA
CGACACAGGCAACGCGCACAACATTAGCATATCCGAAGAACCCGTCAAGG
CGATGGAAGTGGAGTCTGAACTCGAGACAGCCGGCCAGGATCTAGCCATC
ATGGATCCAGAAGCCGCTCTTGATCTGGCGGTGGCGCAATTACCGCTGGA
GTCGGTTTTGCAGCGCTACTTTGACAAGAGTCCGCTGAAGAGCGCCGGCA
TGTTGGCTAAGTTTCTGTCCGCCCAAATGACGGCAAACGAAAAACTTAAG
ACCAACGTGCTAGAGACTCTGTCGGAGAACCACTCCAAGGATTTCCTGGA
CCACGCTGTGCGCGAGAATCTGTCGTCGGTGGTGTGCGACCGCCTGAACC
CGACCTCTGTGCTGGAGTACGTATGCGCCAAGTCCAAGATCAGCGCAAGT
TGCCGCAACGGGCTGCTGGCCCAGGTACCCGAAATTCTGAAAAGCGGCCC
ACGTTCCGATTCTGAGCGCCTGGCCTTCGTACAACAACTGATGGTGCAGT
GCAGCCCCGGTGACGACCTGCTCCTCGATCTCATTGACCTTCTGATGCGT
ACGCGTCGGGAGCGGAACAACAGCACCTCCACTCACATCTCCAAGGGCGT
CGTATCCGCCGTTGGAAGCCCTGACAACGTGGCCGAGACCGCGGCCGACT
CCTCATCAAACTTATAGATTGGACCTGACTTGAAATTACGAATGAAATAT
TAAGCACTTGGCCATTGAACTCGATTAAGTATGGGAAGTTCGATTGTAAC
TAGTTGGTTCTAGATAGTTAAGTTTAAATTGCATTATGTTTAAGATTTAT
ATTATGCCCGTTGGTGTATTATGTTTTGCTGCAAAAACTTGCTTCATATT
CTTACAATAAATTTAATATTTTATTATTATAAAAAAAAAAAAAAAAAAAA
A

LD22218.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:42:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG30085-RA 4665 CG30085-RA 70..4654 1..4585 22925 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:34:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 11753608..11756089 2700..219 12155 99.3 Minus
chr2R 21145070 chr2R 11751579..11753172 4580..2987 7775 99.2 Minus
chr2R 21145070 chr2R 11753260..11753550 2987..2697 1425 99.3 Minus
chr2R 21145070 chr2R 11756175..11756392 218..1 1090 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:11:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:34:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15866338..15868819 2700..219 12410 100 Minus
2R 25286936 2R 15864304..15865902 4585..2987 7995 100 Minus
2R 25286936 2R 15865990..15866280 2987..2697 1455 100 Minus
2R 25286936 2R 15868905..15869122 218..1 1090 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:03:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 15867537..15870018 2700..219 12410 100 Minus
2R 25260384 2R 15865503..15867101 4585..2987 7995 100 Minus
2R 25260384 2R 15867189..15867479 2987..2697 1455 100 Minus
2R 25260384 2R 15870104..15870321 218..1 1090 100 Minus
Blast to na_te.dros performed 2019-03-16 16:34:40
Subject Length Description Subject Range Query Range Score Percent Strand
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1102..1218 4464..4580 152 62.2 Plus

LD22218.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:35:45 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 11753260..11753546 2701..2987 99 <- Minus
chr2R 11751608..11753171 2988..4551 99 <- Minus
chr2R 11753608..11756089 219..2700 99 <- Minus
chr2R 11756175..11756392 1..218 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:58:07 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
CG30085-RA 1..4251 117..4367 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:35:43 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
CG30085-RA 1..4251 117..4367 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:18:13 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
Rif1-RA 1..4251 117..4367 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:11:38 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
CG30085-RA 1..4251 117..4367 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:33:55 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
Rif1-RA 1..4251 117..4367 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:38:45 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
CG30085-RA 24..4603 1..4580 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:35:42 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
CG30085-RA 24..4603 1..4580 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:18:13 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
Rif1-RA 26..4605 1..4580 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:11:38 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
CG30085-RA 24..4603 1..4580 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:33:55 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
Rif1-RA 26..4605 1..4580 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:35:45 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15864309..15865901 2988..4580 100 <- Minus
2R 15865990..15866276 2701..2987 100 <- Minus
2R 15866338..15868819 219..2700 100 <- Minus
2R 15868905..15869122 1..218 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:35:45 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15864309..15865901 2988..4580 100 <- Minus
2R 15865990..15866276 2701..2987 100 <- Minus
2R 15866338..15868819 219..2700 100 <- Minus
2R 15868905..15869122 1..218 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:35:45 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15864309..15865901 2988..4580 100 <- Minus
2R 15865990..15866276 2701..2987 100 <- Minus
2R 15866338..15868819 219..2700 100 <- Minus
2R 15868905..15869122 1..218 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:18:13 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11753843..11756324 219..2700 100 <- Minus
arm_2R 11756410..11756627 1..218 100   Minus
arm_2R 11751814..11753406 2988..4580 100 <- Minus
arm_2R 11753495..11753781 2701..2987 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:48:02 Download gff for LD22218.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15870104..15870321 1..218 100   Minus
2R 15865508..15867100 2988..4580 100 <- Minus
2R 15867189..15867475 2701..2987 100 <- Minus
2R 15867537..15870018 219..2700 100 <- Minus

LD22218.pep Sequence

Translation from 116 to 4366

> LD22218.pep
MDVDFGAQAGQSYRTVQLSAKEVLAAGRRQHYCNMIDLLASSCKSSGLIA
TSFTDDELVEFWLGDILPLMFDADRKIQDCAVAALAEALVALDVSVIHSA
KCWPQIRSEFVDKYTIIIGEMRDAKNSNWHKIWTLLVQIMDEDLLRGCVY
INKFLALVELGFRNPDNGVRSEAFLCWRVLIKIFAAYDELTSAKRLRLLL
IPLRTSQSRSSHVSGIKLRVWWYLLSCLDHELPKSFDSAVEHFLAFMLGG
GPRNLATGLAHNYQTARELALPCLVALWGVESSEPLQRLMRELRLETLVQ
PSPLMSVEVFQQHWKPLLAAAVSGLKLLTENDATEAEQLLLQLLVRNLCL
AMFRLAVAPFNVACCSEIEKILQAEDNSGGRVVRALFNTIAADNLVMERV
SGSDHLDVLEAYLKLVLKSKTEVPAAILQRSIACIFAVDRIEANNQNEFR
MLGSFAELLMQANDEEDFEGFAFKLQVWRQVSQALSNYLRNNALEYRVAH
NASLLDTWLLWPLQTLAAFAGRRASNSFDASFCDQWRQLVNAGQNAPGRK
KFLTDLKATLTDLLKSKDEPLFAELFDAYVTSLIKFGLCKEAPLYKDVFG
LLQTIFEQPSSQKTLEACLNTLRNLVVELRQNELMVVFDSLKPTLSSGIQ
CWNKMKCEGGFLEEWKRGIQEKFRKLPMKTMANQLKELFKADDLFVIIPS
VWSLNPEKLTDRQKERFAEKSDIPALYNDMSQSQDSASIKPWTPKKVVIA
KSKQGELALTGKDDNGEVIDITASEESEKEPVRVDVVTPIRKKPGRKSQA
QKELEAAARAASLAEEPPKRQTRTRAAQKETEQVAQPQPAFEPQLRSPKK
LPPSPVVQSTAAAVKQAKVAKPTPVVVIAQSEDLFPEVAAEPEPQPEPVK
KPDPVPETTQLTPPDVPLEAVPSTQLPGSSGDPAASAGAVAAGEMSPKKS
GTRIYNLSSPPDRKQTNNSSSPTLRPKPTGHLTGRGAQLINMIRNKKLDA
ASGSPYACMSTSRLVHQVTPARAQDRAEQVSTPTSELNELTGTDHTSTPI
QAPPSKDLLVFSKRLPSPSASPSVSILKRKLRCESLDDVTLDSPALKRKR
VSFHDPPVSVTKEYLRDAEETRSSLKPKRCLLMDKVAQTTEMRQALRRRG
RLDSIIEIERFASEQTARTATTDKSLDKSTGEAPEEDAFTSLKWNDTGNA
HNISISEEPVKAMEVESELETAGQDLAIMDPEAALDLAVAQLPLESVLQR
YFDKSPLKSAGMLAKFLSAQMTANEKLKTNVLETLSENHSKDFLDHAVRE
NLSSVVCDRLNPTSVLEYVCAKSKISASCRNGLLAQVPEILKSGPRSDSE
RLAFVQQLMVQCSPGDDLLLDLIDLLMRTRRERNNSTSTHISKGVVSAVG
SPDNVAETAADSSSNL*

LD22218.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13365-PA 1416 GF13365-PA 1..1416 1..1416 5386 77.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22327-PA 1417 GG22327-PA 1..1417 1..1416 6476 92.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21278-PA 1438 GH21278-PA 1..1438 1..1416 4253 62.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:08
Subject Length Description Subject Range Query Range Score Percent Strand
Rif1-PA 1416 CG30085-PA 1..1416 1..1416 7188 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:58:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19102-PA 1012 GI19102-PA 1..1000 1..981 3005 60.8 Plus
Dmoj\GI19103-PA 226 GI19103-PA 1..226 1176..1416 651 59.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:58:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16842-PA 1402 GL16842-PA 1..1402 1..1416 4951 71.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:58:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15636-PA 1405 GA15636-PA 1..1405 1..1416 4939 71.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20115-PA 1410 GM20115-PA 1..1410 1..1416 7217 96.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25592-PA 1410 GD25592-PA 1..1410 1..1416 7204 96.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22233-PA 1421 GJ22233-PA 1..1421 1..1416 4399 64.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20795-PA 1407 GK20795-PA 1..1407 1..1416 4493 62.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14124-PA 919 GE14124-PA 1..871 1..876 4170 93.8 Plus
Dyak\GE14125-PA 380 GE14125-PA 12..380 1051..1416 1570 90.8 Plus

LD22218.hyp Sequence

Translation from 116 to 4366

> LD22218.hyp
MDVDFGAQAGQSYRTVQLSAKEVLAAGRRQHYCNMIDLLASSCKSSGLIA
TSFTDDELVEFWLGDILPLMFDADRKIQDCAVAALAEALVALDVSVIHSA
KCWPQIRSEFVDKYTIIIGEMRDAKNSNWHKIWTLLVQIMDEDLLRGCVY
INKFLALVELGFRNPDNGVRSEAFLCWRVLIKIFAAYDELTSAKRLRLLL
IPLRTSQSRSSHVSGIKLRVWWYLLSCLDHELPKSFDSAVEHFLAFMLGG
GPRNLATGLAHNYQTARELALPCLVALWGVESSEPLQRLMRELRLETLVQ
PSPLMSVEVFQQHWKPLLAAAVSGLKLLTENDATEAEQLLLQLLVRNLCL
AMFRLAVAPFNVACCSEIEKILQAEDNSGGRVVRALFNTIAADNLVMERV
SGSDHLDVLEAYLKLVLKSKTEVPAAILQRSIACIFAVDRIEANNQNEFR
MLGSFAELLMQANDEEDFEGFAFKLQVWRQVSQALSNYLRNNALEYRVAH
NASLLDTWLLWPLQTLAAFAGRRASNSFDASFCDQWRQLVNAGQNAPGRK
KFLTDLKATLTDLLKSKDEPLFAELFDAYVTSLIKFGLCKEAPLYKDVFG
LLQTIFEQPSSQKTLEACLNTLRNLVVELRQNELMVVFDSLKPTLSSGIQ
CWNKMKCEGGFLEEWKRGIQEKFRKLPMKTMANQLKELFKADDLFVIIPS
VWSLNPEKLTDRQKERFAEKSDIPALYNDMSQSQDSASIKPWTPKKVVIA
KSKQGELALTGKDDNGEVIDITASEESEKEPVRVDVVTPIRKKPGRKSQA
QKELEAAARAASLAEEPPKRQTRTRAAQKETEQVAQPQPAFEPQLRSPKK
LPPSPVVQSTAAAVKQAKVAKPTPVVVIAQSEDLFPEVAAEPEPQPEPVK
KPDPVPETTQLTPPDVPLEAVPSTQLPGSSGDPAASAGAVAAGEMSPKKS
GTRIYNLSSPPDRKQTNNSSSPTLRPKPTGHLTGRGAQLINMIRNKKLDA
ASGSPYACMSTSRLVHQVTPARAQDRAEQVSTPTSELNELTGTDHTSTPI
QAPPSKDLLVFSKRLPSPSASPSVSILKRKLRCESLDDVTLDSPALKRKR
VSFHDPPVSVTKEYLRDAEETRSSLKPKRCLLMDKVAQTTEMRQALRRRG
RLDSIIEIERFASEQTARTATTDKSLDKSTGEAPEEDAFTSLKWNDTGNA
HNISISEEPVKAMEVESELETAGQDLAIMDPEAALDLAVAQLPLESVLQR
YFDKSPLKSAGMLAKFLSAQMTANEKLKTNVLETLSENHSKDFLDHAVRE
NLSSVVCDRLNPTSVLEYVCAKSKISASCRNGLLAQVPEILKSGPRSDSE
RLAFVQQLMVQCSPGDDLLLDLIDLLMRTRRERNNSTSTHISKGVVSAVG
SPDNVAETAADSSSNL*

LD22218.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:36:18
Subject Length Description Subject Range Query Range Score Percent Strand
Rif1-PA 1416 CG30085-PA 1..1416 1..1416 7188 100 Plus