Clone LD22367 Report

Gene	Date	Evidence
Dek-RA	2010-02-16	Manual selection by Sue Celniker

Clone Sequence Records

LD22367.complete Sequence

2570 bp assembled on 2010-04-28

GenBank Submission: BT124856.1

> LD22367.complete
CCTCTTCTAGTGAGCAGATTGAATGTGTGTCGGCTGACGGAAAAACAGAA
AAGCCATTAGAAATATGGATGCTAACAAAGCGGCAGAAACGGCAGCCAAA
GAAAATGCCGCCGATAAGGTAAGCGATGTGGAAAATGCATCGGTTACTGC
GGGGGTGGCGAAAGCCGTGGGGGCACAGCCGGAAAGGGGCTCCAAAGATG
CAGCCGAATCCCCCGCCGCTGTCGACGCCTCTGCCTCTGCCGCCACTGAT
GACGTCGCTGATAAAAAAGCCAAAGGAGACTCAACGGCTGTTTCAAATAC
CGAATCGGATGCAGCTGCAGCGGACAAAAAGGAGAAATCCCCCTCGCCGG
TAATAAAGAAGTCCAACAATAAGGATGCTAAAAAGGAGGACAACTCCGAA
AAGGACGAGGAGAACTCGGAAGACGGCGATGAGCCAGAAGATGAGGCTGA
TGAGAAAGCTAGCGATGAAGAGAGCGAGAAGAAGAAACCGAAATTAGATG
CAGAGGACAAGATAAAGGATGCCACTGATGAGTCCAAGCCAAAATCGGGA
GCCGATAAGCCCAAGAAACCTGAGCCCAAGGCCAAGAATGGCAAGGTGGC
TAAGGAGGAGGACGACGACGAAGAGGACGAGGATGATGAGGATGCCGAAG
ATGACGATGGAGACGAGAACGATGGCCTGGACAAGAACAACGAGGTGGCC
GAGGATGATGAGAATGTCGTCGCTCTCGCCGAGATTGATCGCATTAATGA
GAATATCAACAAGACTCGTGTAGATGGTCTGCAAACATTGCATGCAATCT
GCTTTGGCGCCCAAGGCAAGAACAATGTGGTCAAGAAGAACTTGCGATCC
TTTGCCGGTTTCGAGTTTGCCAAGGATTCAGCGGAGTACAACAAAAAGCT
GGAGGCCATCAAAAAGGTGGATAATAAGGGCCTGCGCAGCATCTGCGAGA
TCCTTACCCTCGATCGCAAGGGCAGCAAGAACGAGACTGTCCTTCGAGTG
CTCAAATTCCTAATGGAACCGGACGAGTCGCTTTGCTTGGAGCAGGGTGA
TGAGGAGGAGGAGGAAGATGCCGAGGACGAGGATCTGGATGAAGATGAGG
AGGACCCGCCCAGTGAAGAGGACAAGAAGCGCAAGAGCGGAAAGTCTAGC
GGCGGCGCTGGCAGAGGCTCTGCACGCAATTCCACCGGACGTCCAAGGCG
CGCGACGGCAGGAAAGAAAATGTCCGCCTATGTAGATTTCTCCAGCTCTG
ACGATAGCGAGCAGAAAGTTGCAGTTCCCAAAAGGAGACGAAATGATGAC
TCCGAGTCGGGCTCAGATTACAATCCTTCTGCCAATTCCGACTCTGACGG
TGGTCGTGGTGGTGGTGCTGGTGCAGCAGGTCGCAAAGTCCCAAGCCGCG
GTGGACGCGGTCGTCCTGCGCGCAAAAGTCGCAGAAGAAACTCTGATTCC
GAGGAAGAAGAGGAATCGGAAGTTTCCGATGCCGATAGTGATGTCCCAAA
ACGTAAACGTGGTTCCGTGGGTAAACGTGGACGACCGGCAGCTCCTGCGT
CAGCTGGACGAAGGGGTAGAGGACGAGGTGCAGCTTCCCGCAAGCGTAAA
GATTCAGATAGCGAAGATGAGGAGGTATCCGAGGATGAAGAGGAGGAGGA
TGTCTCCGATTTTGCCAGCGATCAAAGCGAAGAGGAACGTCCCAAAAAGA
GCAAGAAGCCCATTACGCCTGCGAAAAATAGCAAAGCTAACAACAAGTCA
AAACCAGCTGGAAAGGCCGATAGTCGATCGAAAAAATCAAAGAAGGAATC
GTCCGAGGAAGATGATGATGTCGATGACAAAGATGAATCCGACGAGGATG
AGCCACTAACCAAAAAGGGCAAACAGGCATTCCCAACGGATGAACAAATA
CGCGGATATGTCAAAGAGATTCTGGATAAAGCCAATCTTGAGGAGATTAC
GATGAAAACCGTGTGCAAACAAGTTTATGCAAAATATCCAGACTTTGACC
TAACAGACAAGAAAGACTTCATCAAGGCGACAGTGAAAGCGTTAATTGCG
ACATAAAACGACGCGTTGACAAGTCCACTTTAAAGTCGAAGAAGGGTCCA
GGCTCTGTACACATACAACACAAAACAGGCGATAGCAAAGTCAGGACGTT
GTACGCCGATGCAGAAAGAAGTTGGGCATGGTTCGCGAAATGTAACTCCA
AGTAGTTGTCTCCTATAAGTATATGATTTGTACTCCTATCCTAAAAGCTA
TCTGCAGTTCACCTTAATCCTAACGTCAGCGGCAGTCGACTATCCATTCT
TATATATATTCATCTGTATATATAACTTTTTATTTGTCCAACCGTGCGCA
CGCATGCACATCATTTTCTATTTTCCTGAAAGTATGTGCAAACGACAGCT
CTGCGAAGTGTGTAAATTAAGCAAAGAGAAACTTGTAAAAATCCGATAAA
AAAGAAACACCTAAACTGTAGTGCATTTTGATTTGACGTTTAACAAGAAA
AGATGTATTTAACCTTAAGGCACAAGAAATAATAAACAAAAAGCAAAATT
AAAAAAAAAAAAAAAAAAAA

LD22367.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:16:33

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dek.d	3384	Dek.d	43..2597	1..2555	12775	100	Plus
Dek-RA	2684	Dek-RA	43..2597	1..2555	12775	100	Plus
Dek-RC	2627	Dek-RC	92..2580	67..2555	12445	100	Plus
Dek-RC	2627	Dek-RC	14..81	1..68	340	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:22:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr2R	21145070	chr2R	12747015..12747524	2041..2550	2550	100	Plus
chr2R	21145070	chr2R	12744797..12745280	313..796	2420	100	Plus
chr2R	21145070	chr2R	12745347..12745767	797..1217	2105	100	Plus
chr2R	21145070	chr2R	12743971..12744218	67..314	1240	100	Plus
chr2R	21145070	chr2R	12746227..12746416	1493..1682	950	100	Plus
chr2R	21145070	chr2R	12745993..12746168	1319..1494	880	100	Plus
chr2R	21145070	chr2R	12746798..12746955	1888..2045	775	99.4	Plus
chr2R	21145070	chr2R	12746618..12746741	1766..1889	620	100	Plus
chr2R	21145070	chr2R	12745830..12745930	1218..1318	505	100	Plus
chr2R	21145070	chr2R	12746479..12746563	1682..1766	425	100	Plus
chr2R	21145070	chr2R	12743403..12743470	1..68	340	100	Plus

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:21:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25286936	2R	16859849..16860363	2041..2555	2575	100	Plus
2R	25286936	2R	16857631..16858114	313..796	2420	100	Plus
2R	25286936	2R	16858181..16858601	797..1217	2105	100	Plus
2R	25286936	2R	16856805..16857052	67..314	1240	100	Plus
2R	25286936	2R	16859061..16859250	1493..1682	950	100	Plus
2R	25286936	2R	16858827..16859002	1319..1494	880	100	Plus
2R	25286936	2R	16859632..16859789	1888..2045	775	99.4	Plus
2R	25286936	2R	16859452..16859575	1766..1889	620	100	Plus
2R	25286936	2R	16858664..16858764	1218..1318	505	100	Plus
2R	25286936	2R	16859313..16859397	1682..1766	425	100	Plus
2R	25286936	2R	16856237..16856304	1..68	340	100	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:34:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25260384	2R	16861048..16861562	2041..2555	2575	100	Plus
2R	25260384	2R	16858830..16859313	313..796	2420	100	Plus
2R	25260384	2R	16859380..16859800	797..1217	2105	100	Plus
2R	25260384	2R	16858004..16858251	67..314	1240	100	Plus
2R	25260384	2R	16860260..16860449	1493..1682	950	100	Plus
2R	25260384	2R	16860026..16860201	1319..1494	880	100	Plus
2R	25260384	2R	16860831..16860988	1888..2045	775	99.3	Plus
2R	25260384	2R	16860651..16860774	1766..1889	620	100	Plus
2R	25260384	2R	16859863..16859963	1218..1318	505	100	Plus
2R	25260384	2R	16860512..16860596	1682..1766	425	100	Plus
2R	25260384	2R	16857436..16857503	1..68	340	100	Plus

Blast to na_te.dros performed on 2019-03-16 04:21:59 has no hits.

LD22367.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:23:02 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr2R	12743403..12743469	1..67	100	->	Plus
chr2R	12743972..12744218	68..314	100	->	Plus
chr2R	12744799..12745088	315..604	100	==	Plus
chr2R	12745196..12745280	712..796	100	->	Plus
chr2R	12745347..12745588	797..1038	100	==	Plus
chr2R	12745655..12745767	1105..1217	100	->	Plus
chr2R	12745830..12745930	1218..1318	100	->	Plus
chr2R	12745993..12746166	1319..1492	100	->	Plus
chr2R	12746227..12746415	1493..1681	100	->	Plus
chr2R	12746479..12746563	1682..1766	100	->	Plus
chr2R	12746619..12746740	1767..1888	100	->	Plus
chr2R	12746799..12746951	1889..2041	100	->	Plus
chr2R	12747016..12747504	2042..2530	100		Plus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-04-28 10:10:15 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dek-RA	1..1992	65..2056	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:24:33 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dek-RA	1..1992	65..2056	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:26:56 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dek-RA	1..1992	65..2056	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:36:40 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dek-RA	1..1992	65..2056	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-28 10:10:14 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dek-RA	17..2546	1..2530	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:24:33 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dek-RA	17..2546	1..2530	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:26:56 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dek-RA	18..2547	1..2530	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:36:40 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dek-RA	18..2547	1..2530	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:23:02 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	16859633..16859785	1889..2041	100	->	Plus
2R	16856237..16856303	1..67	100	->	Plus
2R	16856806..16857052	68..314	100	->	Plus
2R	16857633..16858114	315..796	100	->	Plus
2R	16858181..16858601	797..1217	100	->	Plus
2R	16858664..16858764	1218..1318	100	->	Plus
2R	16858827..16859000	1319..1492	100	->	Plus
2R	16859061..16859249	1493..1681	100	->	Plus
2R	16859313..16859397	1682..1766	100	->	Plus
2R	16859453..16859574	1767..1888	100	->	Plus
2R	16859850..16860338	2042..2530	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:23:02 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	16859633..16859785	1889..2041	100	->	Plus
2R	16856237..16856303	1..67	100	->	Plus
2R	16856806..16857052	68..314	100	->	Plus
2R	16857633..16858114	315..796	100	->	Plus
2R	16858181..16858601	797..1217	100	->	Plus
2R	16858664..16858764	1218..1318	100	->	Plus
2R	16858827..16859000	1319..1492	100	->	Plus
2R	16859061..16859249	1493..1681	100	->	Plus
2R	16859313..16859397	1682..1766	100	->	Plus
2R	16859453..16859574	1767..1888	100	->	Plus
2R	16859850..16860338	2042..2530	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:23:02 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	16859633..16859785	1889..2041	100	->	Plus
2R	16856237..16856303	1..67	100	->	Plus
2R	16856806..16857052	68..314	100	->	Plus
2R	16857633..16858114	315..796	100	->	Plus
2R	16858181..16858601	797..1217	100	->	Plus
2R	16858664..16858764	1218..1318	100	->	Plus
2R	16858827..16859000	1319..1492	100	->	Plus
2R	16859061..16859249	1493..1681	100	->	Plus
2R	16859313..16859397	1682..1766	100	->	Plus
2R	16859453..16859574	1767..1888	100	->	Plus
2R	16859850..16860338	2042..2530	100		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:26:56 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_2R	12747138..12747290	1889..2041	100	->	Plus
arm_2R	12746818..12746902	1682..1766	100	->	Plus
arm_2R	12746958..12747079	1767..1888	100	->	Plus
arm_2R	12743742..12743808	1..67	100	->	Plus
arm_2R	12744311..12744557	68..314	100	->	Plus
arm_2R	12745138..12745619	315..796	100	->	Plus
arm_2R	12745686..12746106	797..1217	100	->	Plus
arm_2R	12746169..12746269	1218..1318	100	->	Plus
arm_2R	12746332..12746505	1319..1492	100	->	Plus
arm_2R	12746566..12746754	1493..1681	100	->	Plus
arm_2R	12747355..12747843	2042..2530	100		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:56:37 Download gff for LD22367.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	16859863..16859963	1218..1318	100	->	Plus
2R	16860026..16860199	1319..1492	100	->	Plus
2R	16858005..16858251	68..314	100	->	Plus
2R	16858832..16859313	315..796	100	->	Plus
2R	16859380..16859800	797..1217	100	->	Plus
2R	16860260..16860448	1493..1681	100	->	Plus
2R	16860512..16860596	1682..1766	100	->	Plus
2R	16860652..16860773	1767..1888	100	->	Plus
2R	16860832..16860984	1889..2041	100	->	Plus
2R	16861049..16861537	2042..2530	100		Plus
2R	16857436..16857502	1..67	100	->	Plus

LD22367.pep Sequence

Translation from 64 to 2055

> LD22367.pep
MDANKAAETAAKENAADKVSDVENASVTAGVAKAVGAQPERGSKDAAESP
AAVDASASAATDDVADKKAKGDSTAVSNTESDAAAADKKEKSPSPVIKKS
NNKDAKKEDNSEKDEENSEDGDEPEDEADEKASDEESEKKKPKLDAEDKI
KDATDESKPKSGADKPKKPEPKAKNGKVAKEEDDDEEDEDDEDAEDDDGD
ENDGLDKNNEVAEDDENVVALAEIDRINENINKTRVDGLQTLHAICFGAQ
GKNNVVKKNLRSFAGFEFAKDSAEYNKKLEAIKKVDNKGLRSICEILTLD
RKGSKNETVLRVLKFLMEPDESLCLEQGDEEEEEDAEDEDLDEDEEDPPS
EEDKKRKSGKSSGGAGRGSARNSTGRPRRATAGKKMSAYVDFSSSDDSEQ
KVAVPKRRRNDDSESGSDYNPSANSDSDGGRGGGAGAAGRKVPSRGGRGR
PARKSRRRNSDSEEEEESEVSDADSDVPKRKRGSVGKRGRPAAPASAGRR
GRGRGAASRKRKDSDSEDEEVSEDEEEEDVSDFASDQSEEERPKKSKKPI
TPAKNSKANNKSKPAGKADSRSKKSKKESSEEDDDVDDKDESDEDEPLTK
KGKQAFPTDEQIRGYVKEILDKANLEEITMKTVCKQVYAKYPDFDLTDKK
DFIKATVKALIAT*

LD22367.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:41:37

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF11415-PA	649	GF11415-PA	40..649	37..663	1538	74.8	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:41:39

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG20636-PA	665	GG20636-PA	8..665	2..663	2130	94.3	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:41:42

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH20748-PA	701	GH20748-PA	14..701	1..663	1562	64.7	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:53

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dek-PE	663	CG5935-PE	1..663	1..663	3365	100	Plus
Dek-PA	663	CG5935-PA	1..663	1..663	3365	100	Plus
Dek-PC	667	CG5935-PC	6..667	2..663	3360	100	Plus
Dek-PB	669	CG5935-PB	8..669	2..663	3360	100	Plus
Dek-PD	612	CG5935-PD	1..608	1..608	3086	100	Plus
l(2)01289-PM	1193	CG9432-PM	742..1173	99..577	226	22.1	Plus
l(2)01289-PG	1191	CG9432-PG	742..1159	99..577	224	21.3	Plus
CG14692-PE	2851	CG14692-PE	786..1340	12..596	223	20.6	Plus
CG7971-PG	1062	CG7971-PG	153..687	5..601	222	20.1	Plus
CG7971-PA	1062	CG7971-PA	153..687	5..601	222	20.1	Plus
CG7971-PC	1107	CG7971-PC	153..687	5..601	222	20.1	Plus
CG7971-PF	1655	CG7971-PF	378..912	5..601	222	20.1	Plus
CG2839-PA	826	CG2839-PA	265..756	102..602	214	19.3	Plus
Sh3beta-PE	485	CG8582-PE	125..478	6..362	209	23.3	Plus
Strn-Mlck-PT	7905	CG44162-PT	3455..3951	76..627	207	22.1	Plus
Strn-Mlck-PV	7944	CG44162-PV	3494..3990	76..627	207	22.1	Plus
Strn-Mlck-PS	8216	CG44162-PS	3455..3951	76..627	207	22.1	Plus
Strn-Mlck-PU	8255	CG44162-PU	3494..3990	76..627	207	22.1	Plus
Nopp140-PB	686	CG7421-PB	60..656	65..614	203	19.7	Plus
ncm-PA	1330	CG12750-PA	929..1329	36..490	199	21.9	Plus
l(2)01289-PG	1191	CG9432-PG	727..1155	67..528	197	19.3	Plus
Nopp140-PF	685	CG7421-PF	60..558	65..603	197	21.3	Plus
Nopp140-PA	720	CG7421-PA	60..558	65..603	197	21.3	Plus
Nopp140-PE	773	CG7421-PE	60..558	65..603	197	21.3	Plus
dikar-PG	3080	CG42799-PG	840..1405	2..594	195	21	Plus
dikar-PC	3080	CG42799-PC	840..1405	2..594	195	21	Plus
dikar-PD	3222	CG42799-PD	982..1547	2..594	195	21	Plus
dikar-PF	3261	CG42799-PF	982..1547	2..594	195	21	Plus
l(2)01289-PM	1193	CG9432-PM	812..970	62..216	192	29.6	Plus
l(2)01289-PG	1191	CG9432-PG	812..970	62..216	192	29.6	Plus
Strn-Mlck-PT	7905	CG44162-PT	3579..4207	5..650	192	19.2	Plus
Strn-Mlck-PV	7944	CG44162-PV	3618..4246	5..650	192	19.2	Plus
Strn-Mlck-PS	8216	CG44162-PS	3579..4207	5..650	192	19.2	Plus
Strn-Mlck-PU	8255	CG44162-PU	3618..4246	5..650	192	19.2	Plus
D1-PD	355	CG9745-PD	69..309	326..601	192	28.2	Plus
D1-PA	355	CG9745-PA	69..309	326..601	192	28.2	Plus
D1-PC	355	CG9745-PC	69..309	326..601	192	28.2	Plus
CG1703-PB	901	CG1703-PB	5..301	327..604	189	24.6	Plus
CG1703-PA	901	CG1703-PA	5..301	327..604	189	24.6	Plus
CG8677-PB	2663	CG8677-PB	1440..1887	105..613	188	19.9	Plus
CG8677-PC	2663	CG8677-PC	1440..1887	105..613	188	19.9	Plus
Sh3beta-PE	485	CG8582-PE	87..396	52..355	187	26.5	Plus
Nopp140-PE	773	CG7421-PE	308..744	4..456	185	22.8	Plus
Caf1-180-PB	1183	CG12109-PB	49..605	36..605	184	20.6	Plus
futsch-PF	5495	CG34387-PF	3277..3931	9..651	184	19	Plus
futsch-PE	5495	CG34387-PE	3277..3931	9..651	184	19	Plus
futsch-PC	5495	CG34387-PC	3277..3931	9..651	184	19	Plus
l(2)01289-PM	1193	CG9432-PM	784..946	42..217	181	28.7	Plus
l(2)01289-PM	1193	CG9432-PM	776..928	62..217	181	23.7	Plus
l(2)01289-PG	1191	CG9432-PG	776..928	62..217	181	23.7	Plus
l(2)01289-PG	1191	CG9432-PG	784..946	42..217	181	28.7	Plus
Caf1-180-PB	1183	CG12109-PB	243..821	23..597	181	21.4	Plus
eIF5B-PD	1090	CG10840-PD	19..512	59..595	180	21.8	Plus
eIF5B-PE	1108	CG10840-PE	19..512	59..595	180	21.8	Plus
eIF5B-PF	1144	CG10840-PF	19..512	59..595	180	21.8	Plus
eIF5B-PC	1144	CG10840-PC	19..512	59..595	180	21.8	Plus
eIF5B-PB	1144	CG10840-PB	19..512	59..595	180	21.8	Plus
futsch-PF	5495	CG34387-PF	3488..4093	2..622	179	19.3	Plus
futsch-PE	5495	CG34387-PE	3488..4093	2..622	179	19.3	Plus
futsch-PC	5495	CG34387-PC	3488..4093	2..622	179	19.3	Plus
Strn-Mlck-PT	7905	CG44162-PT	3459..4126	2..628	178	19	Plus
Strn-Mlck-PV	7944	CG44162-PV	3498..4165	2..628	178	19	Plus
Strn-Mlck-PS	8216	CG44162-PS	3459..4126	2..628	178	19	Plus
Strn-Mlck-PU	8255	CG44162-PU	3498..4165	2..628	178	19	Plus
l(2)01289-PM	1193	CG9432-PM	741..912	62..230	177	23.3	Plus
l(2)01289-PG	1191	CG9432-PG	741..912	62..230	177	23.3	Plus
CG8677-PB	2663	CG8677-PB	1606..2052	112..596	176	21.9	Plus
CG8677-PC	2663	CG8677-PC	1606..2052	112..596	176	21.9	Plus
CG11180-PA	726	CG11180-PA	228..608	36..415	176	23.6	Plus
Claspin-PB	1465	CG32251-PB	124..679	40..605	176	20.6	Plus
Claspin-PA	1465	CG32251-PA	124..679	40..605	176	20.6	Plus
Strn-Mlck-PT	7905	CG44162-PT	4053..4670	11..658	175	18.6	Plus
Strn-Mlck-PV	7944	CG44162-PV	4092..4709	11..658	175	18.6	Plus
Strn-Mlck-PS	8216	CG44162-PS	4053..4670	11..658	175	18.6	Plus
Strn-Mlck-PU	8255	CG44162-PU	4092..4709	11..658	175	18.6	Plus
CG11180-PB	603	CG11180-PB	228..558	36..362	175	24	Plus
Muc68D-PB	1514	CG6004-PB	273..842	43..610	175	16.9	Plus
Caf1-180-PB	1183	CG12109-PB	106..702	9..601	172	18.3	Plus
futsch-PF	5495	CG34387-PF	3599..4141	2..579	172	20.7	Plus
futsch-PE	5495	CG34387-PE	3599..4141	2..579	172	20.7	Plus
futsch-PC	5495	CG34387-PC	3599..4141	2..579	172	20.7	Plus
Strn-Mlck-PT	7905	CG44162-PT	4110..4767	3..650	170	18.8	Plus
Strn-Mlck-PV	7944	CG44162-PV	4149..4806	3..650	170	18.8	Plus
Strn-Mlck-PS	8216	CG44162-PS	4110..4767	3..650	170	18.8	Plus
Strn-Mlck-PU	8255	CG44162-PU	4149..4806	3..650	170	18.8	Plus
futsch-PF	5495	CG34387-PF	2983..3626	2..642	170	17.6	Plus
futsch-PE	5495	CG34387-PE	2983..3626	2..642	170	17.6	Plus
futsch-PC	5495	CG34387-PC	2983..3626	2..642	170	17.6	Plus
Muc68D-PB	1514	CG6004-PB	408..976	43..610	170	15.7	Plus
futsch-PF	5495	CG34387-PF	3747..4361	2..648	168	22.3	Plus
futsch-PE	5495	CG34387-PE	3747..4361	2..648	168	22.3	Plus
futsch-PC	5495	CG34387-PC	3747..4361	2..648	168	22.3	Plus
CG13185-PD	5526	CG13185-PD	4600..5110	107..627	168	17.9	Plus
CG8108-PA	919	CG8108-PA	115..390	333..614	167	24.4	Plus
CG8108-PB	919	CG8108-PB	115..390	333..614	167	24.4	Plus
l(2)01289-PM	1193	CG9432-PM	740..922	38..217	166	26.7	Plus
l(2)01289-PG	1191	CG9432-PG	740..922	38..217	166	26.7	Plus
Nopp140-PB	686	CG7421-PB	308..541	4..211	164	25.4	Plus
Nopp140-PF	685	CG7421-PF	308..541	4..211	164	25.4	Plus
Nopp140-PA	720	CG7421-PA	308..541	4..211	164	25.4	Plus
futsch-PF	5495	CG34387-PF	1905..2507	3..627	164	20.1	Plus
futsch-PE	5495	CG34387-PE	1905..2507	3..627	164	20.1	Plus
futsch-PC	5495	CG34387-PC	1905..2507	3..627	164	20.1	Plus
Strn-Mlck-PT	7905	CG44162-PT	2629..3266	21..635	160	19.7	Plus
Strn-Mlck-PV	7944	CG44162-PV	2668..3305	21..635	160	19.7	Plus
Strn-Mlck-PS	8216	CG44162-PS	2629..3266	21..635	160	19.7	Plus
Strn-Mlck-PU	8255	CG44162-PU	2668..3305	21..635	160	19.7	Plus
Nopp140-PB	686	CG7421-PB	314..545	5..209	158	25.6	Plus
Nopp140-PF	685	CG7421-PF	314..545	5..209	158	25.6	Plus
Nopp140-PA	720	CG7421-PA	314..545	5..209	158	25.6	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:41:44

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI20832-PA	662	GI20832-PA	14..662	1..663	1633	70.1	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:41:46

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL17742-PA	600	GL17742-PA	140..600	181..663	1369	76.3	Plus
Dper\GL17742-PA	600	GL17742-PA	10..155	1..139	178	49.7	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:41:49

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA27682-PA	674	GA27682-PA	2..674	1..663	1684	72.1	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:41:52

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM21729-PA	663	GM21729-PA	29..663	29..663	3075	97	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:41:53

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD11224-PA	667	GD11224-PA	6..667	2..663	3222	97.7	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:41:56

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ20565-PA	674	GJ20565-PA	14..674	1..663	1659	69.4	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:41:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK22023-PA	700	GK22023-PA	85..700	61..663	1463	71.1	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:42:01

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\Dek-PA	665	GE11825-PA	6..665	2..663	2105	95.2	Plus

LD22367.hyp Sequence

Translation from 64 to 2055

> LD22367.hyp
MDANKAAETAAKENAADKVSDVENASVTAGVAKAVGAQPERGSKDAAESP
AAVDASASAATDDVADKKAKGDSTAVSNTESDAAAADKKEKSPSPVIKKS
NNKDAKKEDNSEKDEENSEDGDEPEDEADEKASDEESEKKKPKLDAEDKI
KDATDESKPKSGADKPKKPEPKAKNGKVAKEEDDDEEDEDDEDAEDDDGD
ENDGLDKNNEVAEDDENVVALAEIDRINENINKTRVDGLQTLHAICFGAQ
GKNNVVKKNLRSFAGFEFAKDSAEYNKKLEAIKKVDNKGLRSICEILTLD
RKGSKNETVLRVLKFLMEPDESLCLEQGDEEEEEDAEDEDLDEDEEDPPS
EEDKKRKSGKSSGGAGRGSARNSTGRPRRATAGKKMSAYVDFSSSDDSEQ
KVAVPKRRRNDDSESGSDYNPSANSDSDGGRGGGAGAAGRKVPSRGGRGR
PARKSRRRNSDSEEEEESEVSDADSDVPKRKRGSVGKRGRPAAPASAGRR
GRGRGAASRKRKDSDSEDEEVSEDEEEEDVSDFASDQSEEERPKKSKKPI
TPAKNSKANNKSKPAGKADSRSKKSKKESSEEDDDVDDKDESDEDEPLTK
KGKQAFPTDEQIRGYVKEILDKANLEEITMKTVCKQVYAKYPDFDLTDKK
DFIKATVKALIAT*

LD22367.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:59:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dek-PE	663	CG5935-PE	1..663	1..663	3365	100	Plus
Dek-PA	663	CG5935-PA	1..663	1..663	3365	100	Plus
Dek-PC	667	CG5935-PC	6..667	2..663	3360	100	Plus
Dek-PB	669	CG5935-PB	8..669	2..663	3360	100	Plus
Dek-PD	612	CG5935-PD	1..608	1..608	3086	100	Plus

Library:	LD
Tissue Source:	Drosophila melanogaster embryo
Created by:	Ling Hong
Date Registered:	1997-12-04
Comments:	Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:	223
Well:	67
Vector:	pOT2
Associated Gene/Transcript	Dek-RA
Protein status:	LD22367.pep: gold
Sequenced Size:	2570

Clone LD22367 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

LD22367.complete Sequence

LD22367.complete Blast Records

LD22367.complete Sim4 Records

LD22367.pep Sequence

LD22367.pep Blast Records

LD22367.hyp Sequence

LD22367.hyp Blast Records