BDGP Sequence Production Resources |
Search the DGRC for LD22374
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 223 |
Well: | 74 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3107-RA |
Protein status: | LD22374.pep: gold |
Preliminary Size: | 3700 |
Sequenced Size: | 3192 |
Gene | Date | Evidence |
---|---|---|
CG3107 | 2001-01-01 | Release 2 assignment |
CG3107 | 2002-05-04 | Blastp of sequenced clone |
CG3107 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3107 | 2008-04-29 | Release 5.5 accounting |
CG3107 | 2008-08-15 | Release 5.9 accounting |
CG3107 | 2008-12-18 | 5.12 accounting |
3192 bp (3192 high quality bases) assembled on 2002-05-04
GenBank Submission: AY102681
> LD22374.complete CGCGATTCAGCACGGATGGTGCTGAGTTCATGTTAAAAGGTGGAATGTTA TCGCGGTGGAAGATGTGGTCTCCACAATACAAAATCTTGAGAAATCACCT TATAAATTTCAAGTCGGTGTCCACATATAAGAACATTTCTGGCGTCAATA CCAAGCAGCCCAAATCTCCACGACAATTTGGTTGCATGCCACATGTAACT AAGAAAAGAAAATACAAGTATGAAGAGGGAAAGACATACCATGGCTTCCA ATGCGAACGTGTGGAACACATTTCTGAATTTGAACTTACGTCCTATACTT TTCGATATGAGCGCACGGGTACAGAATTATGGCATATCGACCGAAATGAT TCAAACAACGTATTTTCCATTAATTTTCGAACCACGCCCTTTGATTCTAC TGGTCTACCTCATATTTTAGAGCATTTATCGTTGTGCGGTTCACAAAAAT ATCCTGTCAGGGACCCTTTCTTCAAAATGCTTAACCGCTCGGTAGCGACA TTTATGAATGCAATGACTGGTCCAGATTATACTATTTATCCTTTTTCGAC GATGAATGAGATAGATTTTAGGAATTTGCAACATATTTATTTAGATGCCG TATTCAGACCAAACCTGGCGTATTTCGATTTTCTTCAAGAGGGCTGGAGG CTAGAAAACAAAGATATATTCGATAAACAATCGAAGCTTGTAATCAAAGG AGTTGTTTATAACGAAATGAAAGGTGCGTTTTCTGAAAACGCGCAGGTAT TTAGTCAGAATTTACTCAATAATATTTTTCCTGATCACACATATCGACAT GTGTCTGGCGGAAATCCATTGGAAATACCCAAGTTAGCATACAACGATTT AGTTGAATTCCACAAAAAATACTATCATCCAAGTAATGCTCGCATATATT CCTACGGATTATTTGATGCAAGTAAAACCCTCGCACTTCTCGACGAGGAG TATTTATCAGATCAAAGCTGGGTTGACAACTCTTACAGTTTAATACGTCA GCAAGAGCGTTGGACTCAGCCTCGTCTTGTACATATATCCAGTAGACTAG ATAACATGGGTACAACAATTGATCGACAGAACCAAATTGCTATTGCACTG CTGATGTGTGATGCAACCAATATACAAGAAAGTTTTGAATTACACGTGCT ATCTGAGGTACTTATTCGTGGGCCTAACTCCCCTTTTTACAAAAACCTTA TAGAACCAAATTTTTCCGGTGGATACAATCAAACCACTGGATATTCATCG GATACTAAGGACACAACCTTCGTCGTTGGATTACAAGACCTTCGAGTTGA AGACTTCAAAAAATGCATTGAAATTTTTGACAAAACCATTATTAATTCTA TGAATGACGGGTTTGATTCCCAGCATGTTGAAAGTGTTCTGCACAATCTT GAGTTGTCTTTAAAGCACCAGAATCCGAACTTCGGAAATACTTTGCTTTT TAATTCCACAGCATTATGGAATCATGATGGCGATGTAGTCAGTAATCTCC GCGTATCAGATATGATATCAGGGCTTCGGGAAAGCATAAGCCAGAATAAA AAATATTTCCAAGAGAAAATAGAGAAATATTTCGCCAATAACAATCATAG ACTAACATTAACTATGTCACCTGATGAGGCATATGAGGATAAATTCAAAC AGGCCGAGTTGGAGTTGGTAGAACAAAAAGTAAAACTTTTGGATGAAGTT AAGATTGAAAAAATATATGAGAGAGGATTAATATTGGATTCATATCAGAA GGCTGAGTCAAATACTGATCTTTTACCTTGTCTGACAATGAATGATGTAA GAGATCCACCAAAATGGCCTAAGCTATTCATACAAAATGTTCAAAATGTT CGGACCCAGATTTGCAAGGTTCCGACCAATGAAATTACTTATTTTAAGTG CATGTTTAATATAACAGGACTAAGTCATGAAGAAACTCAGCTTATGCCGC TTTTTTGCAATGTTATTAGTGCAATGGGCACCACAAACTATAATTATCGG GAGTTCGATAAGCACATCCTTTTAAAAACCGGTGGATTTGATTTTAAGTT ACACTTAATTGAAGATGTTAGGGATTCAAAAAGTTACAGTCTAAGCGTAA TGATAAACACACATGCACTTAATAACAATGTTCCAGAGATGTTTGCCTTG TGCCAAGAGTTGATTAAAAATGTTAGGTTTGATGACTCGGAGCGACTTAA AATGCTTATAGAAAATTATATATCATATATATCTGTGGGAGTGGCTAGTT CTGGTCATTTATATGCTATGTTGGGAGCAACATCACAAGTGTGTGATGCT GGTAAACTCAAATCGCTACTATATGGGGTAGATCATATAGACTTTATGAA AAATTTTGTACATTCTACAAGCACGGTAGATATATGTGATAAATTGTCGA CAATTGCATCAAAAGTTTTTAACAAGGATAATATGCGTGGCGCCATTAAC ACAACACAATCTTATGAGCCATCGGCTATAAGTAATTACGAAAAATTTTT GGAGAGCCTGCCAACATTTGGGAAAACACAAACAAGTCGAAATATCCATT ATTTGGACCCTAGCTGTCAACAATACGTGATGAACATACCAGTTAATTAC TGTGCTAAAGCTTTGTTCACAGTCCCATATCTCCACCAAGACCATCCAAC ACTGCGAGTTTTGGCAAAATTGCTATCAGCCAAATATCTATTGCCTGTTA TTCGCGAGAAGAATGGCGCTTACGGAGCTGGTGCGAAAATCAGCTCAGAC GGGATTTTCAGTTTTTATAGTTATCGAGATCCAAATTCAACTAAAACGCT TAACGCTTTTGATGAAACTTATAAATGGTTACGTGCAAATCAAAATGTAA TTGACCAACAGTCTCTTTTTGAGTCGAAGCTTGGTGTGTTGCAGCAATTA GACACTCCAATAGCACCTGGAAATATTGGCATCGATTATTTCCTTTATGA AGTGTCACAAGAGGATTTTGAGAGCTATCGCTCCCGAATGCTCTCTGTAA CTATTGATGATCTGCAATGCGCTATAGAAAATTATTTTGGAAAAGAGTCC ATGCATTATGGAAAATGCATTTTGGGTCCAGTCAATGCAAATTTGGAGCT TGAAACTAGTCACAAATGGATAATAAATAATTAACTAGTTGTAAATGTAA TAAATTTATAAAATTCAATTTAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 979366..979972 | 1..607 | 99 | -> | Plus |
chr2R | 980023..982586 | 608..3171 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3107-RC | 1..3105 | 30..3134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3107-RC | 1..3105 | 30..3134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3107-RB | 1..3105 | 30..3134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3107-RC | 1..3105 | 30..3134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3107-RA | 1..3105 | 30..3134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3107-RA | 54..3224 | 1..3171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3107-RA | 54..3224 | 1..3171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3107-RA | 60..3230 | 1..3171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3107-RA | 54..3224 | 1..3171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3107-RA | 60..3230 | 1..3171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5091870..5092476 | 1..607 | 99 | -> | Plus |
2R | 5092527..5095090 | 608..3171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5091870..5092476 | 1..607 | 99 | -> | Plus |
2R | 5092527..5095090 | 608..3171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5091870..5092476 | 1..607 | 99 | -> | Plus |
2R | 5092527..5095090 | 608..3171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 979375..979981 | 1..607 | 99 | -> | Plus |
arm_2R | 980032..982595 | 608..3171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5093069..5093675 | 1..607 | 99 | -> | Plus |
2R | 5093726..5096289 | 608..3171 | 100 | Plus |
Translation from 2 to 3133
> LD22374.hyp RFSTDGAEFMLKGGMLSRWKMWSPQYKILRNHLINFKSVSTYKNISGVNT KQPKSPRQFGCMPHVTKKRKYKYEEGKTYHGFQCERVEHISEFELTSYTF RYERTGTELWHIDRNDSNNVFSINFRTTPFDSTGLPHILEHLSLCGSQKY PVRDPFFKMLNRSVATFMNAMTGPDYTIYPFSTMNEIDFRNLQHIYLDAV FRPNLAYFDFLQEGWRLENKDIFDKQSKLVIKGVVYNEMKGAFSENAQVF SQNLLNNIFPDHTYRHVSGGNPLEIPKLAYNDLVEFHKKYYHPSNARIYS YGLFDASKTLALLDEEYLSDQSWVDNSYSLIRQQERWTQPRLVHISSRLD NMGTTIDRQNQIAIALLMCDATNIQESFELHVLSEVLIRGPNSPFYKNLI EPNFSGGYNQTTGYSSDTKDTTFVVGLQDLRVEDFKKCIEIFDKTIINSM NDGFDSQHVESVLHNLELSLKHQNPNFGNTLLFNSTALWNHDGDVVSNLR VSDMISGLRESISQNKKYFQEKIEKYFANNNHRLTLTMSPDEAYEDKFKQ AELELVEQKVKLLDEVKIEKIYERGLILDSYQKAESNTDLLPCLTMNDVR DPPKWPKLFIQNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPL FCNVISAMGTTNYNYREFDKHILLKTGGFDFKLHLIEDVRDSKSYSLSVM INTHALNNNVPEMFALCQELIKNVRFDDSERLKMLIENYISYISVGVASS GHLYAMLGATSQVCDAGKLKSLLYGVDHIDFMKNFVHSTSTVDICDKLST IASKVFNKDNMRGAINTTQSYEPSAISNYEKFLESLPTFGKTQTSRNIHY LDPSCQQYVMNIPVNYCAKALFTVPYLHQDHPTLRVLAKLLSAKYLLPVI REKNGAYGAGAKISSDGIFSFYSYRDPNSTKTLNAFDETYKWLRANQNVI DQQSLFESKLGVLQQLDTPIAPGNIGIDYFLYEVSQEDFESYRSRMLSVT IDDLQCAIENYFGKESMHYGKCILGPVNANLELETSHKWIINN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3107-PD | 1034 | CG3107-PD | 1..1034 | 10..1043 | 5467 | 100 | Plus |
CG3107-PC | 1034 | CG3107-PC | 1..1034 | 10..1043 | 5467 | 100 | Plus |
CG3107-PA | 1034 | CG3107-PA | 1..1034 | 10..1043 | 5467 | 100 | Plus |
CG3107-PB | 1034 | CG3107-PB | 1..1034 | 10..1043 | 5467 | 100 | Plus |
Translation from 29 to 3133
> LD22374.pep MLKGGMLSRWKMWSPQYKILRNHLINFKSVSTYKNISGVNTKQPKSPRQF GCMPHVTKKRKYKYEEGKTYHGFQCERVEHISEFELTSYTFRYERTGTEL WHIDRNDSNNVFSINFRTTPFDSTGLPHILEHLSLCGSQKYPVRDPFFKM LNRSVATFMNAMTGPDYTIYPFSTMNEIDFRNLQHIYLDAVFRPNLAYFD FLQEGWRLENKDIFDKQSKLVIKGVVYNEMKGAFSENAQVFSQNLLNNIF PDHTYRHVSGGNPLEIPKLAYNDLVEFHKKYYHPSNARIYSYGLFDASKT LALLDEEYLSDQSWVDNSYSLIRQQERWTQPRLVHISSRLDNMGTTIDRQ NQIAIALLMCDATNIQESFELHVLSEVLIRGPNSPFYKNLIEPNFSGGYN QTTGYSSDTKDTTFVVGLQDLRVEDFKKCIEIFDKTIINSMNDGFDSQHV ESVLHNLELSLKHQNPNFGNTLLFNSTALWNHDGDVVSNLRVSDMISGLR ESISQNKKYFQEKIEKYFANNNHRLTLTMSPDEAYEDKFKQAELELVEQK VKLLDEVKIEKIYERGLILDSYQKAESNTDLLPCLTMNDVRDPPKWPKLF IQNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPLFCNVISAMG TTNYNYREFDKHILLKTGGFDFKLHLIEDVRDSKSYSLSVMINTHALNNN VPEMFALCQELIKNVRFDDSERLKMLIENYISYISVGVASSGHLYAMLGA TSQVCDAGKLKSLLYGVDHIDFMKNFVHSTSTVDICDKLSTIASKVFNKD NMRGAINTTQSYEPSAISNYEKFLESLPTFGKTQTSRNIHYLDPSCQQYV MNIPVNYCAKALFTVPYLHQDHPTLRVLAKLLSAKYLLPVIREKNGAYGA GAKISSDGIFSFYSYRDPNSTKTLNAFDETYKWLRANQNVIDQQSLFESK LGVLQQLDTPIAPGNIGIDYFLYEVSQEDFESYRSRMLSVTIDDLQCAIE NYFGKESMHYGKCILGPVNANLELETSHKWIINN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12276-PA | 1034 | GF12276-PA | 27..1034 | 28..1034 | 3925 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23138-PA | 1030 | GG23138-PA | 1..1029 | 6..1033 | 4988 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20154-PA | 1021 | GH20154-PA | 15..1019 | 29..1032 | 3762 | 67 | Plus |
Dgri\GH20152-PA | 1011 | GH20152-PA | 44..1007 | 53..1016 | 2861 | 53.3 | Plus |
Dgri\GH21752-PA | 803 | GH21752-PA | 1..555 | 53..607 | 1708 | 54.1 | Plus |
Dgri\GH21752-PA | 803 | GH21752-PA | 551..803 | 763..1015 | 765 | 54.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3107-PD | 1034 | CG3107-PD | 1..1034 | 1..1034 | 5467 | 100 | Plus |
CG3107-PC | 1034 | CG3107-PC | 1..1034 | 1..1034 | 5467 | 100 | Plus |
CG3107-PA | 1034 | CG3107-PA | 1..1034 | 1..1034 | 5467 | 100 | Plus |
CG3107-PB | 1034 | CG3107-PB | 1..1034 | 1..1034 | 5467 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20664-PA | 1034 | GI20664-PA | 51..1032 | 51..1032 | 3787 | 69.1 | Plus |
Dmoj\GI20663-PA | 1025 | GI20663-PA | 50..1021 | 54..1025 | 3183 | 57.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11044-PA | 1000 | GL11044-PA | 2..998 | 36..1032 | 3983 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15984-PA | 1000 | GA15984-PA | 2..998 | 36..1032 | 4004 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13556-PA | 1031 | GM13556-PA | 1..1031 | 6..1034 | 5318 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16680-PA | 1031 | GD16680-PA | 1..1031 | 6..1034 | 5293 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20413-PA | 1032 | GJ20413-PA | 42..1030 | 43..1032 | 3866 | 70.5 | Plus |
Dvir\GJ20412-PA | 1032 | GJ20412-PA | 27..1016 | 26..1023 | 3273 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10626-PA | 1030 | GK10626-PA | 49..1026 | 53..1030 | 3881 | 71 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11344-PA | 1039 | GE11344-PA | 5..1038 | 2..1033 | 4959 | 88.2 | Plus |