BDGP Sequence Production Resources |
Search the DGRC for LD22381
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 223 |
Well: | 81 |
Vector: | pOT2 |
Associated Gene/Transcript | chrb-RC |
Protein status: | LD22381.pep: gold |
Preliminary Size: | 1317 |
Sequenced Size: | 1918 |
Gene | Date | Evidence |
---|---|---|
CG7533 | 2001-09-19 | Blastp of sequenced clone |
CG7533 | 2003-01-01 | Sim4 clustering to Release 3 |
chrb | 2008-04-29 | Release 5.5 accounting |
chrb | 2008-08-15 | Release 5.9 accounting |
chrb | 2008-12-18 | 5.12 accounting |
1918 bp (1918 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060367
> LD22381.complete ACATCGGCACATAAGGGGCAGAACGAGAAGAATTAGAGCCAGAAAATCGG AAAACCAGAAAAGAATACTTCTACAAACGAAACGCAGCCATCAGCACTTG AAACTCCGCCATATGTAGGAAAGCAAAGCAAAGATAAATACGAAATTAAA ATCTCTGTCCAAACAACAAGAACGTCATGAATTAAATCAAAACCATGTGC TGTGCTTAAATTTAAAAAGGAAACCAGACAGAGCGAGACAAAAAGGGGAA GCGAAAGCCCAGAGGAAGAAAATAGCGAGAGAGAGCTGAACGGGGCGGCA ATTTGCGTTGATTTTTTAGAATGTATTGAATTGAAATGTTTAACTAGAAT AACAAATTTAGTTGTTGATACTTTTCCAATTGTTTGTTAAAACGCTGTCG CTGGAAAATCGAACTCTCCACCACATACACACACACAACAAAGTAAACAC ACAATAAAACACCTAACCACACGCGAAGTAAAATCAAATTCTTGTGATTA AAGTGCATTTCTATACGTACGTTAAACTACAACTATTCACACCCACGCAA TATATTAAACGCATCGAAAGTCGGTCGAGATCAAACGCCTATAGCCTATA TAATCGCATTCGCATTCGGTGGCAGCAGCAGGCGGCAGACTTTCATTATA AATCCAACAATCGGCTGAAAACACACAAAATAGCAGTTGCAACGGCGGCT CTATGAAGATGGAAGTGCTCTCAGTACAAAATCACATTCAGGGAAAATTC GGTGTTAATAAAATTAAAGACTGGCAAGCTTCTACGGCGCCGCTGGAGGA GGAGGAGGAGCTGACCGCAGGCGTGAACGGGAACACAGCCGCCGGCGAGG GCATTCTGGACGTCGACGTGGTAGATGGCCATCCAGCCTCTGTGCTCCAC ATGCGACAGCACCAGGCGCTCAACACCCGCCCATCGGCCACGCCTCCATC GGCAGGGGGCGGTGGTCCGTTGGCGGGCGGAGGATCCGTCGGTATGACCA CTCCCAAACAGGCCACGTCGCCGGTGGCCGCGGCCAGTTTTGAGGCGCCC CTTAGCGGTGGCAGTGCAGCCGCCTATCATCACGCCTACATGACCAACGT GCTGTCCAGCACCGCCCAGCAGCACCACCCACTGCCCGCATCGCCGCTGC AGTCGACCGCCTGCGCTCGGTTTGGGGCCGCCGACAACTTGGACGATGTG AGCGCCAGCGCAGTGCGGGAACTGTCGCAGCAACTGCAGGCTCAGCTACG GGATGCCAAGCGTCGCCACCTGGCCTGTACCGAGGTCACGCTGCCCAACG ACCTCACGCAGCGCATCGCCGCCGAGATCATCCGGATGTCGGAGCGGGAA CCATGCGGCGAGCGGGCCTGCACGCTCTTCATTGAGTTCGAGAGCGAGCC CAACAAAGTCAAGCGCATTGCATACTTTAAAGTGGATCCGGACACGGTGT CCATCTTCGAGCTGTACTTGACATTGAGGCAGGACAAGAGCGGCTGGAGC TCCTTGGTGCCGCAGTTTATAAAAAACCTTACTCGTAGCAATACCATCAA CATCAGTCCCGACTTCACGCTGACCAAGAAAAAGCTCTACTCATCCGAGT GAGTCGCTCGACGGAGGAGCGGCATGGAGTGCGAACCAGAATCGCTGGGC TGCTCAGAACTCAATCCCTCCGAACAACAACAGTAACAGCAGCAATCGCA ATACGAACATCTATTGGTTGTGCCTCCTTCGTCGCAATAGCCAAGATTCA TGATCTTCATTATGGAATATAGAGAGATGATGTTTAACCCTAGAGGCAAA CTTTTGGACCACAAACTATCAACTTACTCCTGCAAATAACAAATCAACTC AACGCTAAAGCAAAAACAATTATTTTGGAACCTAAGCTCTAAAACAAAAC CAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11478700..11479468 | 1..769 | 3830 | 99.9 | Plus |
chr3L | 24539361 | chr3L | 11484962..11485607 | 768..1413 | 3215 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 11485891..11486268 | 1524..1901 | 1890 | 100 | Plus |
chr3L | 24539361 | chr3L | 11485720..11485830 | 1413..1523 | 555 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11487833..11488601 | 1..769 | 3845 | 100 | Plus |
3L | 28110227 | 3L | 11494088..11494733 | 768..1413 | 3230 | 100 | Plus |
3L | 28110227 | 3L | 11495017..11495401 | 1524..1908 | 1925 | 100 | Plus |
3L | 28110227 | 3L | 11494846..11494956 | 1413..1523 | 555 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11480933..11481701 | 1..769 | 3845 | 100 | Plus |
3L | 28103327 | 3L | 11487188..11487833 | 768..1413 | 3230 | 100 | Plus |
3L | 28103327 | 3L | 11488117..11488501 | 1524..1908 | 1925 | 100 | Plus |
3L | 28103327 | 3L | 11487946..11488056 | 1413..1523 | 555 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2392..2432 | 1673..1713 | 115 | 75.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2376 | 1673..1711 | 114 | 76.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2950..2988 | 1673..1711 | 114 | 76.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11478700..11479468 | 1..769 | 99 | -> | Plus |
chr3L | 11484964..11485606 | 770..1412 | 99 | -> | Plus |
chr3L | 11485720..11485830 | 1413..1523 | 100 | -> | Plus |
chr3L | 11485891..11486257 | 1524..1890 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrb-RC | 1..900 | 703..1602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrb-RC | 1..900 | 703..1602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrb-RC | 1..900 | 703..1602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrb-RC | 1..900 | 703..1602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrb-RC | 1..900 | 703..1602 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrb-RC | 274..2174 | 1..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrb-RC | 274..2174 | 1..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrb-RC | 284..2184 | 1..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrb-RC | 274..2174 | 1..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrb-RC | 284..2184 | 1..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11487833..11488601 | 1..769 | 100 | -> | Plus |
3L | 11494090..11494732 | 770..1412 | 100 | -> | Plus |
3L | 11494846..11494956 | 1413..1523 | 100 | -> | Plus |
3L | 11495017..11495394 | 1524..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11487833..11488601 | 1..769 | 100 | -> | Plus |
3L | 11494090..11494732 | 770..1412 | 100 | -> | Plus |
3L | 11494846..11494956 | 1413..1523 | 100 | -> | Plus |
3L | 11495017..11495394 | 1524..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11487833..11488601 | 1..769 | 100 | -> | Plus |
3L | 11494090..11494732 | 770..1412 | 100 | -> | Plus |
3L | 11494846..11494956 | 1413..1523 | 100 | -> | Plus |
3L | 11495017..11495394 | 1524..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11480933..11481701 | 1..769 | 100 | -> | Plus |
arm_3L | 11487190..11487832 | 770..1412 | 100 | -> | Plus |
arm_3L | 11487946..11488056 | 1413..1523 | 100 | -> | Plus |
arm_3L | 11488117..11488494 | 1524..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11487946..11488056 | 1413..1523 | 100 | -> | Plus |
3L | 11488117..11488494 | 1524..1901 | 100 | Plus | |
3L | 11480933..11481701 | 1..769 | 100 | -> | Plus |
3L | 11487190..11487832 | 770..1412 | 100 | -> | Plus |
Translation from 702 to 1601
> LD22381.pep MKMEVLSVQNHIQGKFGVNKIKDWQASTAPLEEEEELTAGVNGNTAAGEG ILDVDVVDGHPASVLHMRQHQALNTRPSATPPSAGGGGPLAGGGSVGMTT PKQATSPVAAASFEAPLSGGSAAAYHHAYMTNVLSSTAQQHHPLPASPLQ STACARFGAADNLDDVSASAVRELSQQLQAQLRDAKRRHLACTEVTLPND LTQRIAAEIIRMSEREPCGERACTLFIEFESEPNKVKRIAYFKVDPDTVS IFELYLTLRQDKSGWSSLVPQFIKNLTRSNTINISPDFTLTKKKLYSSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25267-PA | 305 | GF25267-PA | 1..305 | 1..299 | 1268 | 85 | Plus |
Dana\GF25255-PA | 274 | GF25255-PA | 110..248 | 159..299 | 455 | 58.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15507-PA | 299 | GG15507-PA | 1..299 | 1..299 | 1562 | 97.3 | Plus |
Dere\GG15494-PA | 276 | GG15494-PA | 115..250 | 162..299 | 443 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16655-PA | 273 | GH16655-PA | 1..273 | 1..299 | 877 | 63.6 | Plus |
Dgri\GH16643-PA | 280 | GH16643-PA | 121..249 | 165..299 | 439 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrb-PC | 299 | CG7533-PC | 1..299 | 1..299 | 1533 | 100 | Plus |
chrb-PE | 233 | CG7533-PE | 1..233 | 67..299 | 1193 | 100 | Plus |
scyl-PC | 280 | CG7590-PC | 49..254 | 92..299 | 419 | 45.6 | Plus |
scyl-PA | 280 | CG7590-PA | 49..254 | 92..299 | 419 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11614-PA | 304 | GI11614-PA | 1..297 | 1..297 | 873 | 64.1 | Plus |
Dmoj\GI11599-PA | 273 | GI11599-PA | 110..242 | 165..299 | 447 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22796-PA | 289 | GL22796-PA | 1..289 | 1..299 | 1101 | 72.4 | Plus |
Dper\GL22775-PA | 260 | GL22775-PA | 105..237 | 165..299 | 437 | 58.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20420-PA | 289 | GA20420-PA | 1..289 | 1..299 | 1101 | 72.4 | Plus |
Dpse\GA20462-PA | 260 | GA20462-PA | 105..237 | 165..299 | 437 | 58.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25275-PA | 299 | GM25275-PA | 1..299 | 1..299 | 1570 | 98.3 | Plus |
Dsec\GM25265-PA | 278 | GM25265-PA | 118..252 | 163..299 | 444 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14310-PA | 299 | GD14310-PA | 1..299 | 1..299 | 1571 | 98.3 | Plus |
Dsim\GD14299-PA | 481 | GD14299-PA | 118..211 | 163..256 | 292 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11294-PA | 295 | GJ11294-PA | 1..288 | 1..297 | 842 | 61.9 | Plus |
Dvir\GJ11278-PA | 284 | GJ11278-PA | 121..253 | 165..299 | 468 | 63 | Plus |
Translation from 702 to 1601
> LD22381.hyp MKMEVLSVQNHIQGKFGVNKIKDWQASTAPLEEEEELTAGVNGNTAAGEG ILDVDVVDGHPASVLHMRQHQALNTRPSATPPSAGGGGPLAGGGSVGMTT PKQATSPVAAASFEAPLSGGSAAAYHHAYMTNVLSSTAQQHHPLPASPLQ STACARFGAADNLDDVSASAVRELSQQLQAQLRDAKRRHLACTEVTLPND LTQRIAAEIIRMSEREPCGERACTLFIEFESEPNKVKRIAYFKVDPDTVS IFELYLTLRQDKSGWSSLVPQFIKNLTRSNTINISPDFTLTKKKLYSSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrb-PC | 299 | CG7533-PC | 1..299 | 1..299 | 1533 | 100 | Plus |
chrb-PE | 233 | CG7533-PE | 1..233 | 67..299 | 1193 | 100 | Plus |
scyl-PC | 280 | CG7590-PC | 49..254 | 92..299 | 419 | 45.6 | Plus |
scyl-PA | 280 | CG7590-PA | 49..254 | 92..299 | 419 | 45.6 | Plus |