Clone LD22387 Report

Search the DGRC for LD22387

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:223
Well:87
Vector:pOT2
Associated Gene/TranscriptRpII140-RA
Protein status:LD22387.pep: gold
Preliminary Size:2200
Sequenced Size:3779

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3180 2001-01-01 Release 2 assignment
CG3180 2002-12-10 Blastp of sequenced clone
CG3180 2003-01-01 Sim4 clustering to Release 3
RpII140 2008-04-29 Release 5.5 accounting
RpII140 2008-08-15 Release 5.9 accounting
RpII140 2008-12-18 5.12 accounting

Clone Sequence Records

LD22387.complete Sequence

3779 bp (3779 high quality bases) assembled on 2002-12-10

GenBank Submission: BT003265

> LD22387.complete
CACAACGCCGCTAATCGCGTTGTCGGCAAACATTTGTTGTGAAATTTTCT
ACGTTTTTACAATTTAATTCATTGCAAATCCAATTTATTGTTATTTACTT
GAACGCATAAAGTGCTTCTGCACTTTAGAAAACTGAAATCATGATGTACG
ACAACGAGGAAGAACTGTACGAGGAGGAGAATGCCGAGGAGATCTCTCAC
GAGCTGTGGCAGGAAGCCTGCTGGATCGTGATTAACGCGTACTTCGACGA
GAAGGGCTTGGTGCGGCAGCAGCTGGACAGTTTCGATGAGTTCATTCAGA
TGTCGGTGCAGCGCATTGTGGAGGATTCCCCCGCCATTGAGTTGCAGGCG
GAAGCGCAGCACACATCCGGAGAGGTGGAAACCCCGCCCAGATTCTCGCT
GAAATTCGAGCAAATCTATCTTTCCAAGCCAACACATTGGGAAAAGGATG
GTTCGCCCAGTCCTATGATGCCGAACGAGGCCCGCCTGCGAAATCTAACT
TACTCCGCTCCTCTCTACGTGGACATTACGAAAACCAAGAATGTCGAGGG
CCTGGATCCCGTGGAAACGCAGCATCAAAAGACTTTCATAGGCAAGATTC
CCATCATGTTGAGATCAACGTACTGTTTGCTATCACAGCTTACTGATCGT
GATCTTACGGAGCTGAACGAGTGCCCGTTGGATCCCGGTGGCTACTTCAT
CATCAACGGCTCCGAGAAGGTGCTAATTGCCCAAGAGAAAATGGCCACCA
ACACAGTGTACGTGTTCAGCATGAAAGATGGCAAGTATGCCTTTAAGACT
GAGATTCGGTCGTGTTTGGAGCACAGTTCCAGACCCACGTCTACACTGTG
GGTAAACATGATGGCAAGAGGATCGCAAAACATAAAAAAGTCAGCCATTG
GTCAGAGGATTATTGCCATCTTACCGTACATCAAACAGGAGATACCCATT
ATGATTGTGTTTCGAGCATTGGGCTTCGTGGCCGATCGCGATATTCTGGA
GCATATCATCTATGACTTCGACGATCCCGAGATGATGGAAATGGTGAAAC
CTTCTCTGGACGAGGCTTTTGTAGTCCAAGAGCAGAATGTTGCCTTGAAT
TTCATTGGAGCTAGAGGAGCACGTCCCGGAGTCACAAAAGACAAGCGTAT
AAAGTACGCTAAGGAAATTTTGCAAAAGGAAATGCTGCCCCACGTTGGAG
TATCCGATTTCTGCGAGACCAAGAAGGCATACTTTTTGGGCTACATGGTT
CACCGGCTGCTCTTAGCCTCTTTGGGCAGGAGAGAACTCGATGATCGAGA
TCACTATGGAAACAAGCGACTTGATCTCGCTGGACCCCTCCTGGCCTTCC
TCTTCCGTGGTCTGTTCAAAAACCTGATGAAAGAGGTGCGCATGTACACA
CAGAAGTTCATCGATCGCGGAAAGGACTTCAACCTTGAACTGGCCATCAA
GACTAATATTATTACTGATGGTTTAAGGTATTCCTTGGCCACTGGCAATT
GGGGCGACCAGAAGAAGGCGCATCAGGCGAGAGCCGGTGTCTCCCAGGTG
TTGAATCGCTTGACCTTCGCCTCTACTCTTTCCCATTTGCGGCGTGTGAA
TTCGCCAATTGGCAGAGACGGTAAACTGGCCAAACCTCGTCAGTTGCACA
ATACTCTTTGGGGTATGTTGTGTCCCGCTGAAACTCCTGAGGGAGCAGCT
GTTGGTCTGGTGAAGAACCTGGCGCTCATGGCTTACATTTCTGTGGGATC
ACAACCTTCTCCCATTCTGGAGTTCTTGGAGGAGTGGTCTATGGAAAACC
TGGAGGAAATTGCTCCTTCTGCCATCGCTGATGCTACAAAGATCTTTGTG
AACGGCTGCTGGGTGGGCATACATCGTGATCCTGAGCAGCTCATGGCAAC
GCTTCGTAAGTTGCGTCGCCAGATGGATATCATCGTGTCAGAGGTGTCTA
TGATTCGAGACATTCGAGATCGTGAGATCCGAATCTATACAGATGCTGGT
CGCATTTGTCGGCCACTTCTCATCGTGGAAAACGGATCGCTGCTGCTTAA
AAAGACTCACGTGGAGATGTTAAAGGAGCGAGACTACAACAACTACAGTT
GGCAGGTCCTTGTAGCCTCTGGAGTGGTGGAGTACATTGATACCCTTGAG
GAGGAAACGGTCATGATCGCTATGTCTCCCTACGATCTGAAGCAGGACAA
GGATTATGCTTATTGTACCACATACACACATTGTGAGATCCATCCAGCCA
TGATCCTGGGCGTGTGCGCGTCCATTATTCCCTTCCCCGATCACAATCAG
AGTCCGCGTAACACCTATCAAAGCGCTATGGGTAAGCAAGCTATGGGCGT
TTATATTACCAACTTCCACGTGCGTATGGACACACTAGCCCACGTACTTT
ACTATCCGATGAAGCCACTTGTGACCACACGTTCCATGGAGTACCTGCGT
TTCCGAGAACTACCAGCTGGCATCAATTCAATCGTGGCTATTCTCTGCTA
CACTGGCTACAACCAGGAGGATTCTGTCATTCTGAATGCATCCGCTGTGG
AGCGTGGATTCTTCCGCTCTGTGTTCTACCGATCATACAAGGATTCGGAG
AACAAACGTGTCGGTGATCAGGAAGAGAACTTCGAGAAGCCTCATCGCGG
CACCTGCCAAGGAATGAGAAATGCTCACTACGACAAGTTAGACGATGATG
GAATTATTGCCCCAGGAATTCGTGTATCTGGCGACGATGTGGTTATTGGC
AAGACCATTACCCTTCCTGAAAACGACGACGAACTGGACAGCAACACGAA
GCGTTTCTCCAAACGAGATGCCTCCACTTTCCTGCGAAACTCTGAGACGG
GTATTGTGGACCAGGTGATGCTTACGCTCAACAGCGAGGGCTACAAGTTC
TGCAAGATTCGAGTGCGCTCGGTGCGTATTCCGCAGATCGGCGATAAGTT
CGCTTCTCGTCACGGACAAAAGGGAACGTGCGGCATCCAGTACCGTCAGG
AGGACATGGCCTTCACATGCGAGGGATTGGCACCCGATATCATTATTAAC
CCCCACGCTATCCCATCTCGTATGACAATTGGTCACTTGATCGAGTGTCT
GCAGGGAAAACTGGGATCCAACAAGGGAGAGATCGGTGATGCTACACCCT
TCAACGATGCCGTCAACGTGCAAAAGATCTCCACCTTCCTTCAGGAGTAC
GGCTATCATCTTCGAGGCAATGAGGTCATGTACAATGGCCACACTGGACG
AAAGATTAATGCTCAGGTCTTCCTGGGGCCCACCTACTATCAGCGTCTTA
AGCACATGGTGGACGACAAGATTCACTCTCGTGCTCGAGGCCCCGTCCAG
ATCCTGGTGCGTCAGCCTATGGAAGGTCGTGCTCGTGATGGTGGCTTGCG
TTTCGGTGAGATGGAGCGTGATTGCCAGATCTCCCACGGCGCCGCTCAGT
TCCTGCGAGAACGTTTATTCGAGGTCTCCGATCCGTACCGCGTACACATC
TGCAACTTCTGTGGCCTGATTGCCATCGCCAATCTGCGCAACAATACGTT
CGAGTGCAAGGGCTGCAAGAACAAGACGCAGATTTCCCAGGTGCGACTCC
CATATGCGGCCAAGCTTCTCTTCCAGGAGCTGATGTCAATGAACATTGCG
CCGCGCCTGATGGTCACCTAATCAGATCGGTATCCGCAACCGGACCACAT
AATAGCCCTAAGCTAAATGCTAGCAGTTAATTATTAAATTACCATAATTG
TGACAACTCAAAAAAAAAAAAAAAAAAAA

LD22387.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
RpII140-RA 4103 RpII140-RA 60..3820 1..3761 18805 100 Plus
RpII140.a 4074 RpII140.a 31..3791 1..3761 18805 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:29:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 9950948..9953123 161..2336 10880 100 Plus
chr3R 27901430 chr3R 9953189..9954130 2327..3268 4695 99.9 Plus
chr3R 27901430 chr3R 9954185..9954680 3264..3759 2480 100 Plus
chr3R 27901430 chr3R 9950661..9950822 1..162 810 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:11:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:29:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14126094..14128269 161..2336 10880 100 Plus
3R 32079331 3R 14128335..14129276 2327..3268 4695 99.9 Plus
3R 32079331 3R 14129331..14129828 3264..3761 2490 100 Plus
3R 32079331 3R 14125807..14125968 1..162 810 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:06:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 13866925..13869100 161..2336 10880 100 Plus
3R 31820162 3R 13869166..13870107 2327..3268 4695 99.8 Plus
3R 31820162 3R 13870162..13870659 3264..3761 2490 100 Plus
3R 31820162 3R 13866638..13866799 1..162 810 100 Plus
Blast to na_te.dros performed on 2019-03-16 10:29:57 has no hits.

LD22387.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:30:38 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 9950661..9950822 1..162 100 -> Plus
chr3R 9950950..9953118 163..2331 100 -> Plus
chr3R 9953194..9954128 2332..3266 100 -> Plus
chr3R 9954188..9954680 3267..3759 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:58:28 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
RpII140-RA 1..3531 141..3671 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:01:51 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
RpII140-RA 1..3531 141..3671 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:51:37 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
RpII140-RA 1..3531 141..3671 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:52:15 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
RpII140-RA 1..3531 141..3671 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:11:03 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
RpII140-RA 1..3531 141..3671 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:19:46 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
RpII140-RA 15..3773 1..3759 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:01:50 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
RpII140-RA 15..3773 1..3759 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:51:37 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
RpII140-RA 15..3773 1..3759 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:52:15 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
RpII140-RA 15..3773 1..3759 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:11:03 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
RpII140-RA 17..3775 1..3759 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:30:38 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14125807..14125968 1..162 100 -> Plus
3R 14126096..14128264 163..2331 100 -> Plus
3R 14128340..14129274 2332..3266 100 -> Plus
3R 14129334..14129826 3267..3759 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:30:38 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14125807..14125968 1..162 100 -> Plus
3R 14126096..14128264 163..2331 100 -> Plus
3R 14128340..14129274 2332..3266 100 -> Plus
3R 14129334..14129826 3267..3759 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:30:38 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14125807..14125968 1..162 100 -> Plus
3R 14126096..14128264 163..2331 100 -> Plus
3R 14128340..14129274 2332..3266 100 -> Plus
3R 14129334..14129826 3267..3759 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:51:37 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9951529..9951690 1..162 100 -> Plus
arm_3R 9951818..9953986 163..2331 100 -> Plus
arm_3R 9954062..9954996 2332..3266 100 -> Plus
arm_3R 9955056..9955548 3267..3759 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:24:14 Download gff for LD22387.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13866927..13869095 163..2331 100 -> Plus
3R 13869171..13870105 2332..3266 100 -> Plus
3R 13870165..13870657 3267..3759 100   Plus
3R 13866638..13866799 1..162 100 -> Plus

LD22387.pep Sequence

Translation from 140 to 3670

> LD22387.pep
MMYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDE
FIQMSVQRIVEDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHW
EKDGSPSPMMPNEARLRNLTYSAPLYVDITKTKNVEGLDPVETQHQKTFI
GKIPIMLRSTYCLLSQLTDRDLTELNECPLDPGGYFIINGSEKVLIAQEK
MATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNMMARGSQNIKK
SAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLP
HVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPL
LAFLFRGLFKNLMKEVRMYTQKFIDRGKDFNLELAIKTNIITDGLRYSLA
TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR
QLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSPILEFLEEWS
MENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYN
NYSWQVLVASGVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEI
HPAMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLA
HVLYYPMKPLVTTRSMEYLRFRELPAGINSIVAILCYTGYNQEDSVILNA
SAVERGFFRSVFYRSYKDSENKRVGDQEENFEKPHRGTCQGMRNAHYDKL
DDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFSKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ
YRQEDMAFTCEGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGD
ATPFNDAVNVQKISTFLQEYGYHLRGNEVMYNGHTGRKINAQVFLGPTYY
QRLKHMVDDKIHSRARGPVQILVRQPMEGRARDGGLRFGEMERDCQISHG
AAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQ
VRLPYAAKLLFQELMSMNIAPRLMVT*

LD22387.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16238-PA 1176 GF16238-PA 1..1176 1..1176 6364 99.6 Plus
Dana\GF12287-PA 1137 GF12287-PA 35..1134 28..1175 1972 36.7 Plus
Dana\GF20648-PA 1129 GF20648-PA 39..1124 44..1173 965 28.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:22:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16840-PA 1176 GG16840-PA 1..1175 1..1175 6371 99.9 Plus
Dere\GG20240-PA 1137 GG20240-PA 35..1134 28..1175 1952 36.7 Plus
Dere\GG24715-PA 1129 GG24715-PA 39..1124 44..1173 949 28 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19704-PA 1175 GH19704-PA 1..1174 2..1175 6345 99.5 Plus
Dgri\GH20856-PA 1137 GH20856-PA 35..1134 28..1175 1954 36.5 Plus
Dgri\GH25170-PA 267 GH25170-PA 1..267 910..1176 1455 99.6 Plus
Dgri\GH11221-PA 1125 GH11221-PA 35..1120 44..1173 924 26.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:09
Subject Length Description Subject Range Query Range Score Percent Strand
RpII140-PB 1176 CG3180-PB 1..1176 1..1176 6147 100 Plus
RpII140-PA 1176 CG3180-PA 1..1176 1..1176 6147 100 Plus
RpIII128-PA 1137 CG8344-PA 35..1134 28..1175 1890 36.7 Plus
RpI135-PA 1129 CG4033-PA 40..1123 45..1172 907 27.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:22:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23040-PA 1176 GI23040-PA 1..1176 1..1176 6347 99.2 Plus
Dmoj\GI20961-PA 1136 GI20961-PA 35..1133 28..1175 1953 36.6 Plus
Dmoj\GI21635-PA 1122 GI21635-PA 32..1117 44..1173 905 27.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:22:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24239-PA 1176 GL24239-PA 1..1175 1..1175 6363 99.7 Plus
Dper\GL17093-PA 1137 GL17093-PA 32..1134 25..1175 1961 36.4 Plus
Dper\GL18874-PA 1127 GL18874-PA 454..1122 467..1173 831 31.9 Plus
Dper\GL18874-PA 1127 GL18874-PA 36..175 44..195 161 29.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:22:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16485-PA 1176 GA16485-PA 1..1175 1..1175 6363 99.7 Plus
Dpse\GA21006-PA 1137 GA21006-PA 32..1134 25..1175 1957 36.3 Plus
Dpse\GA17896-PA 1126 GA17896-PA 36..1121 44..1173 966 27.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:22:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24152-PA 1176 GM24152-PA 1..1176 1..1176 6384 100 Plus
Dsec\GM21328-PA 1137 GM21328-PA 35..1134 28..1175 1947 36.5 Plus
Dsec\GM16738-PA 1129 GM16738-PA 39..1124 44..1173 938 27.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:22:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18948-PA 1176 GD18948-PA 1..1176 1..1176 6378 99.9 Plus
Dsim\GD10835-PA 1137 GD10835-PA 35..1134 28..1175 1947 36.5 Plus
Dsim\GD23021-PA 1129 GD23021-PA 39..1124 44..1173 930 27.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:22:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\RpII140-PA 1176 GJ24629-PA 1..1176 1..1176 6341 99.1 Plus
Dvir\GJ20682-PA 1137 GJ20682-PA 11..1134 5..1175 1952 36.1 Plus
Dvir\GJ17773-PA 1122 GJ17773-PA 32..1120 44..1176 945 27.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:22:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12191-PA 1176 GK12191-PA 1..1176 1..1176 6367 99.7 Plus
Dwil\GK21338-PA 999 GK21338-PA 2..996 149..1175 1848 37.5 Plus
Dwil\GK24411-PA 1122 GK24411-PA 32..1117 44..1173 932 27.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:22:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24221-PA 1176 GE24221-PA 1..1175 1..1175 6378 100 Plus
Dyak\GE12399-PA 1137 GE12399-PA 35..1134 28..1175 1952 36.8 Plus
Dyak\GE16780-PA 1129 GE16780-PA 39..1124 44..1173 955 28 Plus

LD22387.hyp Sequence

Translation from 140 to 3670

> LD22387.hyp
MMYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDE
FIQMSVQRIVEDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHW
EKDGSPSPMMPNEARLRNLTYSAPLYVDITKTKNVEGLDPVETQHQKTFI
GKIPIMLRSTYCLLSQLTDRDLTELNECPLDPGGYFIINGSEKVLIAQEK
MATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNMMARGSQNIKK
SAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLP
HVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPL
LAFLFRGLFKNLMKEVRMYTQKFIDRGKDFNLELAIKTNIITDGLRYSLA
TGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPR
QLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSPILEFLEEWS
MENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYN
NYSWQVLVASGVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEI
HPAMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLA
HVLYYPMKPLVTTRSMEYLRFRELPAGINSIVAILCYTGYNQEDSVILNA
SAVERGFFRSVFYRSYKDSENKRVGDQEENFEKPHRGTCQGMRNAHYDKL
DDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFSKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ
YRQEDMAFTCEGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGD
ATPFNDAVNVQKISTFLQEYGYHLRGNEVMYNGHTGRKINAQVFLGPTYY
QRLKHMVDDKIHSRARGPVQILVRQPMEGRARDGGLRFGEMERDCQISHG
AAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQ
VRLPYAAKLLFQELMSMNIAPRLMVT*

LD22387.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
RpII140-PB 1176 CG3180-PB 1..1176 1..1176 6147 100 Plus
RpII140-PA 1176 CG3180-PA 1..1176 1..1176 6147 100 Plus
RpIII128-PA 1137 CG8344-PA 35..1134 28..1175 1890 36.7 Plus
RpI135-PA 1129 CG4033-PA 40..1123 45..1172 907 27.3 Plus