BDGP Sequence Production Resources |
Search the DGRC for LD22456
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 224 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2938-RB |
Protein status: | LD22456.pep: gold |
Preliminary Size: | 3117 |
Sequenced Size: | 3246 |
Gene | Date | Evidence |
---|---|---|
CG2938 | 2001-11-29 | Blastp of sequenced clone |
CG2938 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2938 | 2008-04-29 | Release 5.5 accounting |
CG2938 | 2008-08-15 | Release 5.9 accounting |
CG2938 | 2008-12-18 | 5.12 accounting |
3246 bp (3246 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069500
> LD22456.complete CGATAGGAGGAGTCGGTCGCTGCCTAAGGAACAAGCGGAACTGGGTTAAA ACATGCCCATGCAATAGGCCAAATTATCTATATTATAGGCCAGACTTTCC GTCGCAGACCGTTTGGTGGTGGCGGTGGAGAAGGCGGCAGACGGCTTATA AATTATGGAGCTACGCGAACTGCGCGGTGGAAATGGTGGAAGCGTAGGAG GCATTGGAGCAGCTACAACCGGAACCCCCGGAGTGTCAGTGAATGGAGCC CCTAGTCCCGAACTAGGCGGCATCTGCATTGGAGGCGCCGCCGGAGGACA GCGTATGCCCACCAGAGCGGATATATTTATGGAACAACTAAACGCCACCA ATGCCAAGAAGGTGGCTTTGCTTCTGGTCCTCGGCTTCATCGTCTATCAC GGCCTGCTCAACTGGAAATACGGCAGTGACTCCTGCCAGTGGCTGCTGTC CAAGGGCCGATTTAAGGGCGACAACGAGTGGCAGCCGTACGGTTGCATGG TGCACAAGTACTCCCTCACTGACACAAGGCGCTGTTTGCGTTACCTCGCC TTCTTCGACAACAAGAACAACTTTGTGTTCATTGGCGACGAGAGTATACG GCTGCTCTACGAACGATTTGTGGAGCAACTTCGCCTGCCATTGGCCGCGG ATGAAATGGCCGACGAGGAGGACAATAACGCCTCGGTGACTGATGGCTCA GCCCGTTTCGAGGACAAGAAGCTGCATATGCTGGCCCAGTACATTCGGGC GGAGGAGGTGAGTCCGTCGCTTGTGGAGCAACTGTACCGTCTGGAGTCTG AGAAGCAGCTGTCCTCTGTGTACGTTGTGGGCTTCACCTATGCCGGCTTG CTCGCTGGCAACACCACAGACGATGTGCTGCGGCAATATGCCGCCAATCT TACATTGCTGGTGGCTCCGTTTCATCGCCTGGTGGCGCAAACTTCGCGGG TCCTCTGGAAGCTAGCAGACCGCGTGGACGAGGAGAAATTGCCCGCGCAC TGGAAGCTGCTCCAGAACGAGCAAATCGATCGATTAAACCATGTGGCCAG AGGAGTTTTTCGCTACACGGAGGCAAGTGTTTGGGAATCCGCCTGGCACA TAGCCAATGGTTTGCTGGACAACGCCATCGATGGTCATCAGCTGTGCGCC CATGGCCAGCGACTGGAGGTTCAGCTACTGTGGAACATGTACTGCAATGA CTACATGAACTACAATGATGGCACCTGCTGCAGCAGTTCTGAGCCATACA CCACGCTGCAAATAGTGGCATACGCCTTGTTTGGCGTCTGTATGGCGCTT GTGTGTGGCATGTGTCTGCGCAGATGGGTGCTTCACCTGCGGGGCCAGAC TTTGTATGTGCCCCTGCAGCAGCAGCAATCTTACGACGGGGGAAGAGCAG GTGGAGGATCACCGAGCAATGCCTTATCCGCTCTGATAACCGACTATGGC ACTCCCATGGTGGCGCTATCACTGCTGGGCCTAATTTTGGCCTATTTCTA CCTCTGCGATCGCACAAACTTCTTTATGAAGGAGAACAAATACTATTCTG AGTTTAGCTTCTGGATACCAGTGGGCTATGTCTTCGCACTCGGATTGTTT TTTACGGAAGATTCACGGTTCACTAAGGTGCTCAATCGCGATCAAACGGA TGAACTGCGTGGCTGGATACTGCTGGTGGTGCTTATATATTACATGACCG GAGCACAGCGAGTGCTGCCCATTCACATGCACATTAAGCTGTTGATCTCA GGATACTTTTTCCTTACCGGATACACGCACTTCACGCATATGTGGCAAAC GGGTGGCAGTGGCTCCCTATTCGTACGCTTTTTCCAGGCCATGTTCCGGG CAAACTTTCTCAGTGTACTGCTGTGCTTCTGCATGAACCGGCCGTATCAG TTCTACTATTTTGTGCCACTACTATCCTTTTGGCTGTGCATCGTATACTT TGTGCTCGCACTGCCGCCACGAATTTCGTCCGCATCGGTGGACGCCAATC CGCTGCACTATCTGTATTTGGTGTGCAAGTGCATTGGTTGCCTGGGCGGC ATCACGGTGCTCTTCATGTCGGAGGTATTCTTCGAACGGATATTCGTAAC GCGACCGTGGAAAGCGTTGTTTGTGACCACTGACGACGACCTGCACGAGT GGTGGCATCAGTGGAAACTGGACCGGTATACGGTGGCCTTTGGCATGATA TATGCCGCCTGCTTTCACATTGCCCAAAAGTACAATGTGTTCGATGACAA CAACCATGGGAATCTGTTTTCGCGAAGGACATCAATATCAGTCACATTGC TGGCCCTGCTGGGCGTCGGGGTGTACACTTCGTTCTCGTTCCTTTGCCGC AACGTTCAGAACTGTGAGGAGATCCATTCGTATATACTGTTCATCCCGAT TGTGGGCTATGTGGTCCTCAGGAACATTTCGGGTATTCTACGTACACGAT ACTCGGCGTTCTTCGCCTGGTTTGGCCGCATCTCGTTGGAGCTGTTCGTC TGCCAGTATCATATTTGGCTGGCCGCCGATCGGCATGGAGTTCTGGTGCT GCTGCCCGGTTTCCCGACGCTCAACATGATCATTACATCGTTCATATTTG TGTGCGCATCGCACGAGGTGCACCGCCTCACCCAAATCCTGCTGCCGTAT GCGGTGCCCAGCGACTGGCGTCTGGTCATGCGAAATTTCGTCATCTTCCT CATCGTGCTCATACCCGTCGCCCGATCGGATGGCATGTTCTGATCCTGAG CGATTCGCAATCCAATTGCCGCCCAGGTATTGACCCAAAGTATTCGATAG ATAGCATAGCCTATTCGGCAAATATGGAACGAACTTAATTGTTTAACGTC AGGGTGGAACGGTTCTGTATTTAAGCTTATGACCTTAAAATCCATTTGCC ATATCTCGATATTTTTTTAAAAGATACTTAACTCTAAGGCCATGGGTCAA ATATTTGTTTTCGTTTTGCCTAAGAAACCCCGGGATCTGGCATTTTTGCT AAGATTCAGACAAGACAATAATTTAATTTGTTAATGTATGTGTATATCGG AATTATTTGCGCCGATGTATACAGCCTAGGGTTAACTTAGCCTTAATTAA ATTTTGCACAAATTACTTAACAACTCACCCAACCAAACACACTCACACTC AAACATAAGCAGCGGCAAACCAAATGTATGTATAAAGCAAGAGAATAAAG CAATGGATATACACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2938-RB | 3758 | CG2938-RB | 101..3137 | 1..3037 | 15185 | 100 | Plus |
CG2938.a | 3932 | CG2938.a | 101..3137 | 1..3037 | 15185 | 100 | Plus |
CG2938-RB | 3758 | CG2938-RB | 3461..3644 | 3034..3217 | 920 | 100 | Plus |
CG2938.a | 3932 | CG2938.a | 3461..3644 | 3034..3217 | 920 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 3825984..3828501 | 3037..520 | 12500 | 99.8 | Minus |
chrX | 22417052 | chrX | 3829051..3829473 | 423..1 | 2100 | 99.8 | Minus |
chrX | 22417052 | chrX | 3825478..3825660 | 3216..3034 | 915 | 100 | Minus |
chrX | 22417052 | chrX | 3828582..3828679 | 519..422 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 3932662..3935179 | 3037..520 | 12590 | 100 | Minus |
X | 23542271 | X | 3935729..3936151 | 423..1 | 2115 | 100 | Minus |
X | 23542271 | X | 3932155..3932338 | 3217..3034 | 920 | 100 | Minus |
X | 23542271 | X | 3935260..3935357 | 519..422 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 3940760..3943277 | 3037..520 | 12590 | 100 | Minus |
X | 23527363 | X | 3943827..3944249 | 423..1 | 2115 | 100 | Minus |
X | 23527363 | X | 3940253..3940436 | 3217..3034 | 920 | 100 | Minus |
X | 23527363 | X | 3943358..3943455 | 519..422 | 490 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 3828582..3828678 | 423..519 | 100 | <- | Minus |
chrX | 3825478..3825658 | 3036..3216 | 100 | <- | Minus |
chrX | 3825986..3828501 | 520..3035 | 99 | <- | Minus |
chrX | 3829052..3829473 | 1..422 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2938-RB | 1..2589 | 155..2743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2938-RB | 1..2589 | 155..2743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2938-RB | 1..2589 | 155..2743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2938-RB | 1..2589 | 155..2743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2938-RB | 1..2589 | 155..2743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2938-RB | 3151..3333 | 3034..3216 | 100 | Plus | |
CG2938-RB | 101..3133 | 1..3033 | 100 | -- | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2938-RB | 3463..3643 | 3036..3216 | 100 | Plus | |
CG2938-RB | 101..3135 | 1..3035 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2938-RB | 77..3111 | 1..3035 | 100 | -> | Plus |
CG2938-RB | 3439..3619 | 3036..3216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2938-RB | 101..3133 | 1..3033 | 100 | -- | Plus |
CG2938-RB | 3151..3333 | 3034..3216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2938-RB | 77..3111 | 1..3035 | 100 | -> | Plus |
CG2938-RB | 3439..3619 | 3036..3216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3932156..3932336 | 3036..3216 | 100 | <- | Minus |
X | 3932664..3935179 | 520..3035 | 100 | <- | Minus |
X | 3935260..3935356 | 423..519 | 100 | <- | Minus |
X | 3935730..3936151 | 1..422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3932156..3932336 | 3036..3216 | 100 | <- | Minus |
X | 3932664..3935179 | 520..3035 | 100 | <- | Minus |
X | 3935260..3935356 | 423..519 | 100 | <- | Minus |
X | 3935730..3936151 | 1..422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3932156..3932336 | 3036..3216 | 100 | <- | Minus |
X | 3932664..3935179 | 520..3035 | 100 | <- | Minus |
X | 3935260..3935356 | 423..519 | 100 | <- | Minus |
X | 3935730..3936151 | 1..422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 3826189..3826369 | 3036..3216 | 100 | <- | Minus |
arm_X | 3826697..3829212 | 520..3035 | 100 | <- | Minus |
arm_X | 3829293..3829389 | 423..519 | 100 | <- | Minus |
arm_X | 3829763..3830184 | 1..422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3940762..3943277 | 520..3035 | 100 | <- | Minus |
X | 3943358..3943454 | 423..519 | 100 | <- | Minus |
X | 3943828..3944249 | 1..422 | 100 | Minus | |
X | 3940254..3940434 | 3036..3216 | 100 | <- | Minus |
Translation from 154 to 2742
> LD22456.pep MELRELRGGNGGSVGGIGAATTGTPGVSVNGAPSPELGGICIGGAAGGQR MPTRADIFMEQLNATNAKKVALLLVLGFIVYHGLLNWKYGSDSCQWLLSK GRFKGDNEWQPYGCMVHKYSLTDTRRCLRYLAFFDNKNNFVFIGDESIRL LYERFVEQLRLPLAADEMADEEDNNASVTDGSARFEDKKLHMLAQYIRAE EVSPSLVEQLYRLESEKQLSSVYVVGFTYAGLLAGNTTDDVLRQYAANLT LLVAPFHRLVAQTSRVLWKLADRVDEEKLPAHWKLLQNEQIDRLNHVARG VFRYTEASVWESAWHIANGLLDNAIDGHQLCAHGQRLEVQLLWNMYCNDY MNYNDGTCCSSSEPYTTLQIVAYALFGVCMALVCGMCLRRWVLHLRGQTL YVPLQQQQSYDGGRAGGGSPSNALSALITDYGTPMVALSLLGLILAYFYL CDRTNFFMKENKYYSEFSFWIPVGYVFALGLFFTEDSRFTKVLNRDQTDE LRGWILLVVLIYYMTGAQRVLPIHMHIKLLISGYFFLTGYTHFTHMWQTG GSGSLFVRFFQAMFRANFLSVLLCFCMNRPYQFYYFVPLLSFWLCIVYFV LALPPRISSASVDANPLHYLYLVCKCIGCLGGITVLFMSEVFFERIFVTR PWKALFVTTDDDLHEWWHQWKLDRYTVAFGMIYAACFHIAQKYNVFDDNN HGNLFSRRTSISVTLLALLGVGVYTSFSFLCRNVQNCEEIHSYILFIPIV GYVVLRNISGILRTRYSAFFAWFGRISLELFVCQYHIWLAADRHGVLVLL PGFPTLNMIITSFIFVCASHEVHRLTQILLPYAVPSDWRLVMRNFVIFLI VLIPVARSDGMF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21094-PA | 875 | GF21094-PA | 52..875 | 49..862 | 4109 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18568-PA | 866 | GG18568-PA | 1..866 | 1..862 | 4502 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17907-PA | 907 | GH17907-PA | 42..907 | 36..862 | 3773 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2938-PD | 862 | CG2938-PD | 1..862 | 1..862 | 4600 | 100 | Plus |
CG2938-PC | 862 | CG2938-PC | 1..862 | 1..862 | 4600 | 100 | Plus |
CG2938-PB | 862 | CG2938-PB | 1..862 | 1..862 | 4600 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16046-PA | 853 | GI16046-PA | 18..853 | 34..862 | 3728 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14546-PA | 825 | GL14546-PA | 1..809 | 1..804 | 3568 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15532-PA | 866 | GA15532-PA | 1..866 | 1..862 | 4030 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12710-PA | 862 | GM12710-PA | 1..862 | 1..862 | 4545 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16317-PA | 859 | GD16317-PA | 1..859 | 1..862 | 4546 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15558-PA | 857 | GJ15558-PA | 19..857 | 36..862 | 3766 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10363-PA | 364 | GK10363-PA | 1..360 | 1..370 | 1491 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16879-PA | 868 | GE16879-PA | 1..868 | 1..862 | 4461 | 96 | Plus |
Translation from 154 to 2742
> LD22456.hyp MELRELRGGNGGSVGGIGAATTGTPGVSVNGAPSPELGGICIGGAAGGQR MPTRADIFMEQLNATNAKKVALLLVLGFIVYHGLLNWKYGSDSCQWLLSK GRFKGDNEWQPYGCMVHKYSLTDTRRCLRYLAFFDNKNNFVFIGDESIRL LYERFVEQLRLPLAADEMADEEDNNASVTDGSARFEDKKLHMLAQYIRAE EVSPSLVEQLYRLESEKQLSSVYVVGFTYAGLLAGNTTDDVLRQYAANLT LLVAPFHRLVAQTSRVLWKLADRVDEEKLPAHWKLLQNEQIDRLNHVARG VFRYTEASVWESAWHIANGLLDNAIDGHQLCAHGQRLEVQLLWNMYCNDY MNYNDGTCCSSSEPYTTLQIVAYALFGVCMALVCGMCLRRWVLHLRGQTL YVPLQQQQSYDGGRAGGGSPSNALSALITDYGTPMVALSLLGLILAYFYL CDRTNFFMKENKYYSEFSFWIPVGYVFALGLFFTEDSRFTKVLNRDQTDE LRGWILLVVLIYYMTGAQRVLPIHMHIKLLISGYFFLTGYTHFTHMWQTG GSGSLFVRFFQAMFRANFLSVLLCFCMNRPYQFYYFVPLLSFWLCIVYFV LALPPRISSASVDANPLHYLYLVCKCIGCLGGITVLFMSEVFFERIFVTR PWKALFVTTDDDLHEWWHQWKLDRYTVAFGMIYAACFHIAQKYNVFDDNN HGNLFSRRTSISVTLLALLGVGVYTSFSFLCRNVQNCEEIHSYILFIPIV GYVVLRNISGILRTRYSAFFAWFGRISLELFVCQYHIWLAADRHGVLVLL PGFPTLNMIITSFIFVCASHEVHRLTQILLPYAVPSDWRLVMRNFVIFLI VLIPVARSDGMF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2938-PD | 862 | CG2938-PD | 1..862 | 1..862 | 4600 | 100 | Plus |
CG2938-PC | 862 | CG2938-PC | 1..862 | 1..862 | 4600 | 100 | Plus |
CG2938-PB | 862 | CG2938-PB | 1..862 | 1..862 | 4600 | 100 | Plus |